RNA–Protein interactions for RNA: ENSMUST00000078409.4

Trim61-201, Transcript of MCG22896, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim61, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61-201ENSMUST00000078409 Grin2bQ01097 1482 aa16.99■□□□□ 0.31
Trim61-201ENSMUST00000078409 Plppr3Q7TPB0 716 aa16.95■□□□□ 0.3
Trim61-201ENSMUST00000078409 Fmn1Q05860 1466 aa16.94■□□□□ 0.3
Trim61-201ENSMUST00000078409 Abcc1O35379 1528 aa16.92■□□□□ 0.3
Trim61-201ENSMUST00000078409 Grin2aP35436 1464 aa16.91■□□□□ 0.3
Trim61-201ENSMUST00000078409 Rapgef2Q8CHG7 1496 aa16.9■□□□□ 0.3
Trim61-201ENSMUST00000078409 Magi3Q9EQJ9 1476 aa16.9■□□□□ 0.3
Trim61-201ENSMUST00000078409 Efcab5A0JP43 1406 aa16.9■□□□□ 0.3
Trim61-201ENSMUST00000078409 Chd1P40201 1711 aa16.87■□□□□ 0.29
Trim61-201ENSMUST00000078409 Gpatch8A2A6A1 1505 aa16.87■□□□□ 0.29
Trim61-201ENSMUST00000078409 Ythdc2B2RR83 1445 aaKnown RBP16.87■□□□□ 0.29
Trim61-201ENSMUST00000078409 Rad54l2Q99NG0 1466 aa16.87■□□□□ 0.29
Trim61-201ENSMUST00000078409 PrkcshO08795 521 aa16.86■□□□□ 0.29
Trim61-201ENSMUST00000078409 Setbp1Q9Z180 1582 aa16.85■□□□□ 0.29
Trim61-201ENSMUST00000078409 AknaQ80VW7 1404 aa16.85■□□□□ 0.29
Trim61-201ENSMUST00000078409 Cngb1E1AZ71 1325 aa16.82■□□□□ 0.28
Trim61-201ENSMUST00000078409 CadpsQ80TJ1 1355 aa16.82■□□□□ 0.28
Trim61-201ENSMUST00000078409 Top2aQ01320 1528 aaKnown RBP16.78■□□□□ 0.28
Trim61-201ENSMUST00000078409 Plekhg3Q4VAC9 1341 aa16.75■□□□□ 0.27
Trim61-201ENSMUST00000078409 Ak9G3UYQ4 1894 aa16.74■□□□□ 0.27
Trim61-201ENSMUST00000078409 Dnmt1P13864 1620 aaKnown RBP16.74■□□□□ 0.27
Trim61-201ENSMUST00000078409 Pla2r1Q62028 1487 aa16.74■□□□□ 0.27
Trim61-201ENSMUST00000078409 Soga1E1U8D0 1418 aa16.72■□□□□ 0.27
Trim61-201ENSMUST00000078409 Ppp1r18Q8BQ30 594 aa16.69■□□□□ 0.26
Trim61-201ENSMUST00000078409 EprsQ8CGC7 1512 aaKnown RBP16.68■□□□□ 0.26
Trim61-201ENSMUST00000078409 AI481877A2ALV5 1481 aa16.68■□□□□ 0.26
Trim61-201ENSMUST00000078409 Neo1P97798 1493 aa16.67■□□□□ 0.26
Trim61-201ENSMUST00000078409 NrkQ9R0G8 1455 aa16.66■□□□□ 0.26
Trim61-201ENSMUST00000078409 SynmQ70IV5 1561 aa16.66■□□□□ 0.26
Trim61-201ENSMUST00000078409 BC005561E9Q5E2 1589 aa16.65■□□□□ 0.26
Trim61-201ENSMUST00000078409 Map3k4O08648 1597 aa16.64■□□□□ 0.26
Trim61-201ENSMUST00000078409 AdgbG3UZ78 1657 aa16.64■□□□□ 0.25
Trim61-201ENSMUST00000078409 Gm14025A2AP89 1413 aa16.63■□□□□ 0.25
Trim61-201ENSMUST00000078409 Ccdc88bQ4QRL3 1481 aa16.63■□□□□ 0.25
Trim61-201ENSMUST00000078409 Abcc2Q8VI47 1543 aa16.62■□□□□ 0.25
Trim61-201ENSMUST00000078409 Abca16E9PWJ7 1678 aa16.61■□□□□ 0.25
Trim61-201ENSMUST00000078409 Arhgef12Q8R4H2 1543 aaKnown RBP16.61■□□□□ 0.25
Trim61-201ENSMUST00000078409 Clasp1Q80TV8 1535 aaKnown RBP16.6■□□□□ 0.25
Trim61-201ENSMUST00000078409 Arhgef11Q68FM7 1552 aa16.6■□□□□ 0.25
Trim61-201ENSMUST00000078409 Ttc37F8VPK0 1563 aa16.58■□□□□ 0.25
Trim61-201ENSMUST00000078409 TchhA0A0B4J1F9 1599 aa16.58■□□□□ 0.24
Trim61-201ENSMUST00000078409 Alpk3Q924C5 1678 aa16.58■□□□□ 0.24
Trim61-201ENSMUST00000078409 1700123L14RikQ3V2K7 440 aa16.57■□□□□ 0.24
Trim61-201ENSMUST00000078409 Mapkbp1Q6NS57 1503 aa16.56■□□□□ 0.24
Trim61-201ENSMUST00000078409 Shroom4Q1W617 1475 aa16.55■□□□□ 0.24
Trim61-201ENSMUST00000078409 WizO88286 1684 aaKnown RBP16.53■□□□□ 0.24
Trim61-201ENSMUST00000078409 Arhgap27A2AB59 869 aa16.52■□□□□ 0.24
Trim61-201ENSMUST00000078409 PxdnQ3UQ28 1475 aa16.52■□□□□ 0.23
Trim61-201ENSMUST00000078409 Adamts12Q811B3 1600 aa16.51■□□□□ 0.23
Trim61-201ENSMUST00000078409 Eif4g1Q6NZJ6 1600 aaKnown RBP16.49■□□□□ 0.23
Trim61-201ENSMUST00000078409 Slx4Q6P1D7 1565 aa16.48■□□□□ 0.23
Trim61-201ENSMUST00000078409 Aplp2Q06335 707 aa16.47■□□□□ 0.23
Trim61-201ENSMUST00000078409 Gtf3c5Q8R2T8 520 aa16.47■□□□□ 0.23
Trim61-201ENSMUST00000078409 BccipQ9CWI3 316 aa16.44■□□□□ 0.22
Trim61-201ENSMUST00000078409 Acin1Q9JIX8 1338 aaKnown RBP16.42■□□□□ 0.22
Trim61-201ENSMUST00000078409 Neurod1Q60867 357 aa16.41■□□□□ 0.22
Trim61-201ENSMUST00000078409 Pknox2Q8BG99 474 aa16.41■□□□□ 0.22
Trim61-201ENSMUST00000078409 Depdc5P61460 1591 aa16.41■□□□□ 0.22
Trim61-201ENSMUST00000078409 Ifnlr1Q8CGK5 535 aa16.4■□□□□ 0.22
Trim61-201ENSMUST00000078409 ArxO35085 564 aa16.4■□□□□ 0.22
Trim61-201ENSMUST00000078409 Zfyve16Q80U44 1528 aa16.4■□□□□ 0.22
Trim61-201ENSMUST00000078409 Jph4Q80WT0 628 aa16.37■□□□□ 0.21
Trim61-201ENSMUST00000078409 Fndc1E9Q043 1732 aa16.37■□□□□ 0.21
Trim61-201ENSMUST00000078409 Lrrc9Q8CDN9 1456 aa16.37■□□□□ 0.21
Trim61-201ENSMUST00000078409 Zeb1Q64318 1117 aa16.35■□□□□ 0.21
Trim61-201ENSMUST00000078409 Igf1rQ60751 1373 aa16.33■□□□□ 0.2
Trim61-201ENSMUST00000078409 Arid3cA6PWV5 409 aa16.31■□□□□ 0.2
Trim61-201ENSMUST00000078409 Rrbp1Q99PL5 1605 aaKnown RBP16.29■□□□□ 0.2
Trim61-201ENSMUST00000078409 Mroh2bQ7M6Y6 1581 aa16.29■□□□□ 0.2
Trim61-201ENSMUST00000078409 Kdm5bQ80Y84 1544 aa16.29■□□□□ 0.2
Trim61-201ENSMUST00000078409 NrdcQ8BHG1 1161 aa16.29■□□□□ 0.2
Trim61-201ENSMUST00000078409 Abca5Q8K448 1642 aa16.28■□□□□ 0.2
Trim61-201ENSMUST00000078409 Rpap1Q80TE0 1409 aa16.28■□□□□ 0.2
Trim61-201ENSMUST00000078409 Brwd3A2AHJ4 1799 aa16.26■□□□□ 0.19
Trim61-201ENSMUST00000078409 Wdr7Q920I9 1489 aa16.26■□□□□ 0.19
Trim61-201ENSMUST00000078409 Znf608Q56A10 1511 aa16.25■□□□□ 0.19
Trim61-201ENSMUST00000078409 Gm7298A0A0N4SVU1 1476 aa16.25■□□□□ 0.19
Trim61-201ENSMUST00000078409 Fgd1P52734 960 aa16.24■□□□□ 0.19
Trim61-201ENSMUST00000078409 AglF8VPN4 1532 aa16.24■□□□□ 0.19
Trim61-201ENSMUST00000078409 Cyb5rlB1AS42 316 aa16.24■□□□□ 0.19
Trim61-201ENSMUST00000078409 Dnajc5gQ8C632 165 aa16.23■□□□□ 0.19
Trim61-201ENSMUST00000078409 Fkbp15Q6P9Q6 1216 aaKnown RBP16.22■□□□□ 0.19
Trim61-201ENSMUST00000078409 MlecQ6ZQI3 291 aaKnown RBP16.21■□□□□ 0.19
Trim61-201ENSMUST00000078409 Ercc6l2Q9JIM3 1537 aa16.2■□□□□ 0.18
Trim61-201ENSMUST00000078409 Map3k1P53349 1493 aa16.2■□□□□ 0.18
Trim61-201ENSMUST00000078409 NhsB1AV60 1647 aa16.19■□□□□ 0.18
Trim61-201ENSMUST00000078409 Kdm6bQ5NCY0 1641 aa16.19■□□□□ 0.18
Trim61-201ENSMUST00000078409 Rnf17Q99MV7 1640 aa16.19■□□□□ 0.18
Trim61-201ENSMUST00000078409 Carmil1Q6EDY6 1374 aa16.19■□□□□ 0.18
Trim61-201ENSMUST00000078409 Anks4bQ8K3X6 423 aa16.18■□□□□ 0.18
Trim61-201ENSMUST00000078409 Cul7Q8VE73 1689 aa16.18■□□□□ 0.18
Trim61-201ENSMUST00000078409 Cdk11bP24788 784 aaKnown RBP16.17■□□□□ 0.18
Trim61-201ENSMUST00000078409 Hecw2Q6I6G8 1578 aa16.17■□□□□ 0.18
Trim61-201ENSMUST00000078409 WrnO09053 1401 aa16.15■□□□□ 0.18
Trim61-201ENSMUST00000078409 Polr1aO35134 1717 aaKnown RBP16.14■□□□□ 0.17
Trim61-201ENSMUST00000078409 TimelessQ9R1X4 1197 aa16.12■□□□□ 0.17
Trim61-201ENSMUST00000078409 Chic1Q8CBW7 227 aa16.11■□□□□ 0.17
Trim61-201ENSMUST00000078409 Atp10dQ8K2X1 1416 aa16.09■□□□□ 0.17
Trim61-201ENSMUST00000078409 Naip2Q9QUK4 1447 aa16.08■□□□□ 0.16
Trim61-201ENSMUST00000078409 Npm2Q80W85 207 aa16.04■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms