RNA–Protein interactions for RNA: ENSMUST00000077569.10

Smarca1-201, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Smarca1, Length 4,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-201ENSMUST00000077569 Rtn4Q99P72 1162 aaKnown RBP12.32□□□□□ -0.44
Smarca1-201ENSMUST00000077569 Rb1cc1Q9ESK9 1588 aa12.3□□□□□ -0.44
Smarca1-201ENSMUST00000077569 Kdm5dQ62240 1548 aa12.3□□□□□ -0.44
Smarca1-201ENSMUST00000077569 Lmod2Q3UHZ5 550 aa12.29□□□□□ -0.44
Smarca1-201ENSMUST00000077569 Spryd3E9Q9B3 442 aa12.28□□□□□ -0.44
Smarca1-201ENSMUST00000077569 Vsig10D3YX43 558 aa12.25□□□□□ -0.45
Smarca1-201ENSMUST00000077569 Baz1aO88379 1555 aa12.22□□□□□ -0.45
Smarca1-201ENSMUST00000077569 Rad21Q61550 635 aaKnown RBP12.21□□□□□ -0.45
Smarca1-201ENSMUST00000077569 IbspQ61711 324 aa12.2□□□□□ -0.46
Smarca1-201ENSMUST00000077569 ChgaP26339 463 aaKnown RBP12.16□□□□□ -0.46
Smarca1-201ENSMUST00000077569 Znf692Q3U381 531 aa12.14□□□□□ -0.47
Smarca1-201ENSMUST00000077569 Arid4bA2CG63 1314 aaKnown RBP12.14□□□□□ -0.47
Smarca1-201ENSMUST00000077569 B4galnt3Q6L8S8 986 aa12.13□□□□□ -0.47
Smarca1-201ENSMUST00000077569 Dbr1Q923B1 550 aa12.13□□□□□ -0.47
Smarca1-201ENSMUST00000077569 Pak3Q61036 559 aa12.12□□□□□ -0.47
Smarca1-201ENSMUST00000077569 Clip1Q922J3 1391 aa12.12□□□□□ -0.47
Smarca1-201ENSMUST00000077569 Crybg2B7ZCC2 1516 aa12.1□□□□□ -0.47
Smarca1-201ENSMUST00000077569 Trim30dE9PWL0 497 aa12.1□□□□□ -0.47
Smarca1-201ENSMUST00000077569 AU015836B2RUM3 263 aa12.09□□□□□ -0.47
Smarca1-201ENSMUST00000077569 DekQ7TNV0 380 aaKnown RBP12.09□□□□□ -0.47
Smarca1-201ENSMUST00000077569 Ofd1Q80Z25 1017 aa12.09□□□□□ -0.47
Smarca1-201ENSMUST00000077569 Polr3glQ8R0C0 218 aa12.08□□□□□ -0.47
Smarca1-201ENSMUST00000077569 Prdm10Q3UTQ7 1184 aa12.08□□□□□ -0.48
Smarca1-201ENSMUST00000077569 NacadQ5SWP3 1504 aa12.08□□□□□ -0.48
Smarca1-201ENSMUST00000077569 Smarca2Q6DIC0 1577 aa12.08□□□□□ -0.48
Smarca1-201ENSMUST00000077569 Ipo9Q91YE6 1041 aa12.08□□□□□ -0.48
Smarca1-201ENSMUST00000077569 Trim44Q9QXA7 346 aa12.08□□□□□ -0.48
Smarca1-201ENSMUST00000077569 Dnttip2Q8R2M2 758 aaKnown RBP12.07□□□□□ -0.48
Smarca1-201ENSMUST00000077569 Rangap1P46061 589 aaKnown RBP12.06□□□□□ -0.48
Smarca1-201ENSMUST00000077569 Wwc2Q6NXJ0 1187 aa12.06□□□□□ -0.48
Smarca1-201ENSMUST00000077569 Ccer2J3QPU5 274 aa12.05□□□□□ -0.48
Smarca1-201ENSMUST00000077569 Fgd1P52734 960 aa12.04□□□□□ -0.48
Smarca1-201ENSMUST00000077569 Hsp90ab1P11499 724 aaKnown RBP12.04□□□□□ -0.48
Smarca1-201ENSMUST00000077569 Apbb1Q9QXJ1 710 aa12.02□□□□□ -0.49
Smarca1-201ENSMUST00000077569 Sin3aQ60520 1274 aaKnown RBP12.02□□□□□ -0.49
Smarca1-201ENSMUST00000077569 Tcerg1Q8CGF7 1100 aaKnown RBP12.01□□□□□ -0.49
Smarca1-201ENSMUST00000077569 Znf710Q3U288 666 aa11.98□□□□□ -0.49
Smarca1-201ENSMUST00000077569 Ipo4Q8VI75 1082 aa11.98□□□□□ -0.49
Smarca1-201ENSMUST00000077569 Plcb2A3KGF7 1181 aa11.97□□□□□ -0.49
Smarca1-201ENSMUST00000077569 Chic2Q9D9G3 165 aa11.94□□□□□ -0.5
Smarca1-201ENSMUST00000077569 Os9Q8K2C7 672 aa11.94□□□□□ -0.5
Smarca1-201ENSMUST00000077569 Rsf1E9PWW9 1441 aaKnown RBP11.94□□□□□ -0.5
Smarca1-201ENSMUST00000077569 CatipB9EKE5 520 aa11.92□□□□□ -0.5
Smarca1-201ENSMUST00000077569 Hspa5P20029 655 aaKnown RBP11.92□□□□□ -0.5
Smarca1-201ENSMUST00000077569 Tnnt2P50752 301 aa11.92□□□□□ -0.5
Smarca1-201ENSMUST00000077569 Sycp2Q9CUU3 1500 aa11.92□□□□□ -0.5
Smarca1-201ENSMUST00000077569 Dnai1Q8C0M8 701 aa11.91□□□□□ -0.5
Smarca1-201ENSMUST00000077569 Htatsf1Q8BGC0 757 aa11.89□□□□□ -0.51
Smarca1-201ENSMUST00000077569 Ppm1gQ61074 542 aa11.89□□□□□ -0.51
Smarca1-201ENSMUST00000077569 Armcx1Q9CX83 456 aa11.88□□□□□ -0.51
Smarca1-201ENSMUST00000077569 Sart3Q9JLI8 962 aaKnown RBP11.88□□□□□ -0.51
Smarca1-201ENSMUST00000077569 Exoc6Q8R313 802 aa11.87□□□□□ -0.51
Smarca1-201ENSMUST00000077569 Znf316Q6PGE4 1016 aa11.85□□□□□ -0.51
Smarca1-201ENSMUST00000077569 Trim26Q99PN3 545 aa11.85□□□□□ -0.51
Smarca1-201ENSMUST00000077569 BicraF8VPZ9 1578 aa11.84□□□□□ -0.51
Smarca1-201ENSMUST00000077569 PtmaP26350 111 aa11.84□□□□□ -0.51
Smarca1-201ENSMUST00000077569 Erich6bQ9D4S6 220 aa11.84□□□□□ -0.51
Smarca1-201ENSMUST00000077569 Nlrp6Q91WS2 869 aa11.83□□□□□ -0.52
Smarca1-201ENSMUST00000077569 Pdcl3Q8BVF2 240 aa11.83□□□□□ -0.52
Smarca1-201ENSMUST00000077569 Chmp5Q9D7S9 219 aa11.83□□□□□ -0.52
Smarca1-201ENSMUST00000077569 SlkO54988 1233 aa11.81□□□□□ -0.52
Smarca1-201ENSMUST00000077569 Gm6268A2A3U9 297 aa11.81□□□□□ -0.52
Smarca1-201ENSMUST00000077569 Gm13697A2AK42 830 aa11.8□□□□□ -0.52
Smarca1-201ENSMUST00000077569 Zfp777B9EKF4 885 aa11.79□□□□□ -0.52
Smarca1-201ENSMUST00000077569 Iqcf3Q9D498 203 aa11.79□□□□□ -0.52
Smarca1-201ENSMUST00000077569 BlmO88700 1416 aa11.78□□□□□ -0.52
Smarca1-201ENSMUST00000077569 Kcnh8P59111 1102 aa11.78□□□□□ -0.52
Smarca1-201ENSMUST00000077569 Neurod2Q62414 383 aa11.77□□□□□ -0.53
Smarca1-201ENSMUST00000077569 Rrp12Q6P5B0 1295 aaKnown RBP11.75□□□□□ -0.53
Smarca1-201ENSMUST00000077569 Fbxo2Q80UW2 297 aa11.75□□□□□ -0.53
Smarca1-201ENSMUST00000077569 Rgl3Q3UYI5 709 aa11.74□□□□□ -0.53
Smarca1-201ENSMUST00000077569 TimelessQ9R1X4 1197 aa11.72□□□□□ -0.53
Smarca1-201ENSMUST00000077569 AampJ3QN89 436 aa11.72□□□□□ -0.53
Smarca1-201ENSMUST00000077569 Ccdc88bQ4QRL3 1481 aa11.71□□□□□ -0.53
Smarca1-201ENSMUST00000077569 Eif2s2Q99L45 331 aaKnown RBP11.71□□□□□ -0.53
Smarca1-201ENSMUST00000077569 Rbm10Q99KG3 930 aaKnown RBP11.69□□□□□ -0.54
Smarca1-201ENSMUST00000077569 DmtnQ9WV69 405 aa11.69□□□□□ -0.54
Smarca1-201ENSMUST00000077569 Arhgap27A2AB59 869 aa11.69□□□□□ -0.54
Smarca1-201ENSMUST00000077569 Grwd1Q810D6 446 aaKnown RBP11.69□□□□□ -0.54
Smarca1-201ENSMUST00000077569 EspnQ9ET47 871 aa11.68□□□□□ -0.54
Smarca1-201ENSMUST00000077569 Gtf2a1Q99PM3 378 aa11.68□□□□□ -0.54
Smarca1-201ENSMUST00000077569 Podxl2Q8CAE9 603 aa11.67□□□□□ -0.54
Smarca1-201ENSMUST00000077569 Rrp9Q91WM3 475 aaKnown RBP11.66□□□□□ -0.54
Smarca1-201ENSMUST00000077569 Vgll3P85442 326 aa11.66□□□□□ -0.54
Smarca1-201ENSMUST00000077569 Smg6P61406 1418 aaKnown RBP11.65□□□□□ -0.54
Smarca1-201ENSMUST00000077569 Setd5Q5XJV7 1441 aa11.65□□□□□ -0.54
Smarca1-201ENSMUST00000077569 Gtf3c5Q8R2T8 520 aa11.65□□□□□ -0.54
Smarca1-201ENSMUST00000077569 Washc2Q6PGL7 1334 aa11.65□□□□□ -0.54
Smarca1-201ENSMUST00000077569 MsnP26041 577 aaKnown RBP11.65□□□□□ -0.54
Smarca1-201ENSMUST00000077569 Stard8Q8K031 1019 aa11.65□□□□□ -0.54
Smarca1-201ENSMUST00000077569 Erich6D3Z6S9 713 aa11.64□□□□□ -0.55
Smarca1-201ENSMUST00000077569 Samd1D3YXK1 519 aa11.64□□□□□ -0.55
Smarca1-201ENSMUST00000077569 Mre11Q61216 706 aa11.63□□□□□ -0.55
Smarca1-201ENSMUST00000077569 Paxip1Q6NZQ4 1056 aa11.63□□□□□ -0.55
Smarca1-201ENSMUST00000077569 Ipo8Q7TMY7 1010 aa11.63□□□□□ -0.55
Smarca1-201ENSMUST00000077569 Liat1Q810M6 228 aa11.63□□□□□ -0.55
Smarca1-201ENSMUST00000077569 Znf326O88291 580 aa11.62□□□□□ -0.55
Smarca1-201ENSMUST00000077569 VgfQ0VGU4 617 aa11.62□□□□□ -0.55
Smarca1-201ENSMUST00000077569 Gpatch11Q3UFS4 262 aa11.62□□□□□ -0.55
Smarca1-201ENSMUST00000077569 Ubap1lG3UW59 384 aa11.61□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 58.3 ms