RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Gpatch8A2A6A1 1505 aa17.23■□□□□ 0.35
Vamp1-202ENSMUST00000063588 Pbrm1Q8BSQ9 1634 aaKnown RBP17.23■□□□□ 0.35
Vamp1-202ENSMUST00000063588 Setd1bQ8CFT2 1985 aa17.22■□□□□ 0.35
Vamp1-202ENSMUST00000063588 Cux1P53564 1515 aa17.21■□□□□ 0.35
Vamp1-202ENSMUST00000063588 Urb2E9Q7L1 1524 aaKnown RBP17.21■□□□□ 0.34
Vamp1-202ENSMUST00000063588 Pcf11G3X9Z4 1553 aa17.2■□□□□ 0.34
Vamp1-202ENSMUST00000063588 Fyco1Q8VDC1 1437 aa17.19■□□□□ 0.34
Vamp1-202ENSMUST00000063588 Rad54l2Q99NG0 1466 aa17.19■□□□□ 0.34
Vamp1-202ENSMUST00000063588 NefmP08553 848 aa17.18■□□□□ 0.34
Vamp1-202ENSMUST00000063588 Plb1Q3TTY0 1478 aa17.18■□□□□ 0.34
Vamp1-202ENSMUST00000063588 Peg3Q3URU2 1571 aa17.17■□□□□ 0.34
Vamp1-202ENSMUST00000063588 Pla2r1Q62028 1487 aa17.16■□□□□ 0.34
Vamp1-202ENSMUST00000063588 Magi3Q9EQJ9 1476 aa17.16■□□□□ 0.34
Vamp1-202ENSMUST00000063588 UbtfP25976 765 aaKnown RBP17.16■□□□□ 0.34
Vamp1-202ENSMUST00000063588 Ift140E9PY46 1464 aa17.15■□□□□ 0.34
Vamp1-202ENSMUST00000063588 Lrriq1Q0P5X1 1673 aa17.14■□□□□ 0.33
Vamp1-202ENSMUST00000063588 Plekhg3Q4VAC9 1341 aa17.13■□□□□ 0.33
Vamp1-202ENSMUST00000063588 CntlnA2AM05 1397 aa17.13■□□□□ 0.33
Vamp1-202ENSMUST00000063588 Disp1Q3TDN0 1521 aa17.13■□□□□ 0.33
Vamp1-202ENSMUST00000063588 Naip1Q9QWK5 1403 aa17.12■□□□□ 0.33
Vamp1-202ENSMUST00000063588 EprsQ8CGC7 1512 aaKnown RBP17.12■□□□□ 0.33
Vamp1-202ENSMUST00000063588 Grin2aP35436 1464 aa17.12■□□□□ 0.33
Vamp1-202ENSMUST00000063588 Abca5Q8K448 1642 aa17.1■□□□□ 0.33
Vamp1-202ENSMUST00000063588 Ncapd3Q6ZQK0 1506 aa17.1■□□□□ 0.33
Vamp1-202ENSMUST00000063588 Adamts12Q811B3 1600 aa17.09■□□□□ 0.33
Vamp1-202ENSMUST00000063588 Slx4Q6P1D7 1565 aa17.08■□□□□ 0.32
Vamp1-202ENSMUST00000063588 Nup160Q9Z0W3 1402 aaKnown RBP17.06■□□□□ 0.32
Vamp1-202ENSMUST00000063588 Ap3b1Q9Z1T1 1105 aa17.04■□□□□ 0.32
Vamp1-202ENSMUST00000063588 WizO88286 1684 aaKnown RBP17.03■□□□□ 0.32
Vamp1-202ENSMUST00000063588 BlmO88700 1416 aa17.03■□□□□ 0.32
Vamp1-202ENSMUST00000063588 CadpsQ80TJ1 1355 aa17.01■□□□□ 0.31
Vamp1-202ENSMUST00000063588 Gm7298A0A0N4SVU1 1476 aa17■□□□□ 0.31
Vamp1-202ENSMUST00000063588 TchhA0A0B4J1F9 1599 aa17■□□□□ 0.31
Vamp1-202ENSMUST00000063588 Abca16E9PWJ7 1678 aa16.99■□□□□ 0.31
Vamp1-202ENSMUST00000063588 Aebp1Q640N1 1128 aa16.98■□□□□ 0.31
Vamp1-202ENSMUST00000063588 Cc2d2bA0A286YDU8 1405 aa16.98■□□□□ 0.31
Vamp1-202ENSMUST00000063588 Soga1E1U8D0 1418 aa16.97■□□□□ 0.31
Vamp1-202ENSMUST00000063588 Gm1043A0A140LJC2 1431 aa16.93■□□□□ 0.3
Vamp1-202ENSMUST00000063588 Eif4g3Q80XI3 1579 aaKnown RBP16.91■□□□□ 0.3
Vamp1-202ENSMUST00000063588 Rusc2Q80U22 1514 aa16.89■□□□□ 0.29
Vamp1-202ENSMUST00000063588 PxdnQ3UQ28 1475 aa16.88■□□□□ 0.29
Vamp1-202ENSMUST00000063588 Kdm5bQ80Y84 1544 aa16.87■□□□□ 0.29
Vamp1-202ENSMUST00000063588 Gcc2Q8CHG3 1679 aa16.84■□□□□ 0.29
Vamp1-202ENSMUST00000063588 Abcc2Q8VI47 1543 aa16.84■□□□□ 0.29
Vamp1-202ENSMUST00000063588 Kif27Q7M6Z4 1394 aa16.83■□□□□ 0.29
Vamp1-202ENSMUST00000063588 Lmtk2Q3TYD6 1471 aa16.83■□□□□ 0.28
Vamp1-202ENSMUST00000063588 Rapgef6Q5NCJ1 1609 aa16.79■□□□□ 0.28
Vamp1-202ENSMUST00000063588 Lmod2Q3UHZ5 550 aa16.79■□□□□ 0.28
Vamp1-202ENSMUST00000063588 3425401B19RikD3Z1D3 1412 aa16.78■□□□□ 0.28
Vamp1-202ENSMUST00000063588 Shroom2A2ALU4 1481 aa16.78■□□□□ 0.28
Vamp1-202ENSMUST00000063588 Map3k4O08648 1597 aa16.77■□□□□ 0.27
Vamp1-202ENSMUST00000063588 WrnO09053 1401 aa16.76■□□□□ 0.27
Vamp1-202ENSMUST00000063588 Dnmt1P13864 1620 aaKnown RBP16.74■□□□□ 0.27
Vamp1-202ENSMUST00000063588 Mia2Q91ZV0 1396 aa16.73■□□□□ 0.27
Vamp1-202ENSMUST00000063588 BC005561E9Q5E2 1589 aa16.73■□□□□ 0.27
Vamp1-202ENSMUST00000063588 NexmifQ5DTT1 1515 aa16.72■□□□□ 0.27
Vamp1-202ENSMUST00000063588 Fhad1A6PWD2 1420 aa16.72■□□□□ 0.27
Vamp1-202ENSMUST00000063588 Cdc42bpaQ3UU96 1719 aa16.71■□□□□ 0.26
Vamp1-202ENSMUST00000063588 Arhgap27A2AB59 869 aa16.7■□□□□ 0.26
Vamp1-202ENSMUST00000063588 Ccnb3Q810T2 1396 aa16.7■□□□□ 0.26
Vamp1-202ENSMUST00000063588 Arhgef11Q68FM7 1552 aa16.7■□□□□ 0.26
Vamp1-202ENSMUST00000063588 Naip2Q9QUK4 1447 aa16.68■□□□□ 0.26
Vamp1-202ENSMUST00000063588 Mug1P28665 1476 aa16.68■□□□□ 0.26
Vamp1-202ENSMUST00000063588 Pcgf6Q99NA9 353 aa16.68■□□□□ 0.26
Vamp1-202ENSMUST00000063588 Vps8Q0P5W1 1427 aa16.68■□□□□ 0.26
Vamp1-202ENSMUST00000063588 Las1lA2BE28 776 aaKnown RBP16.67■□□□□ 0.26
Vamp1-202ENSMUST00000063588 Ncoa2Q61026 1462 aa16.67■□□□□ 0.26
Vamp1-202ENSMUST00000063588 Rrbp1Q99PL5 1605 aaKnown RBP16.67■□□□□ 0.26
Vamp1-202ENSMUST00000063588 A2mQ6GQT1 1474 aa16.66■□□□□ 0.26
Vamp1-202ENSMUST00000063588 Ccer2J3QPU5 274 aa16.65■□□□□ 0.26
Vamp1-202ENSMUST00000063588 Zcchc11B2RX14 1644 aaKnown RBP16.65■□□□□ 0.26
Vamp1-202ENSMUST00000063588 TonslQ6NZL6 1363 aa16.64■□□□□ 0.25
Vamp1-202ENSMUST00000063588 Kiaa1551Q5DTW7 1521 aa16.64■□□□□ 0.25
Vamp1-202ENSMUST00000063588 Dhx57Q6P5D3 1388 aaKnown RBP16.63■□□□□ 0.25
Vamp1-202ENSMUST00000063588 Dnajc5P60904 198 aa16.62■□□□□ 0.25
Vamp1-202ENSMUST00000063588 Ncoa3O09000 1398 aa16.62■□□□□ 0.25
Vamp1-202ENSMUST00000063588 Fgd6Q69ZL1 1399 aa16.62■□□□□ 0.25
Vamp1-202ENSMUST00000063588 Ccdc141E9Q8Q6 1531 aa16.61■□□□□ 0.25
Vamp1-202ENSMUST00000063588 UacaQ8CGB3 1411 aa16.61■□□□□ 0.25
Vamp1-202ENSMUST00000063588 Arhgap31A6X8Z5 1425 aa16.6■□□□□ 0.25
Vamp1-202ENSMUST00000063588 Fam50aQ9WV03 339 aaKnown RBP16.59■□□□□ 0.25
Vamp1-202ENSMUST00000063588 Fhod3Q76LL6 1578 aa16.59■□□□□ 0.25
Vamp1-202ENSMUST00000063588 Mroh2aD3Z750 1679 aa16.58■□□□□ 0.25
Vamp1-202ENSMUST00000063588 Rfx7F8VPJ6 1459 aa16.57■□□□□ 0.24
Vamp1-202ENSMUST00000063588 Magi1Q6RHR9 1471 aa16.57■□□□□ 0.24
Vamp1-202ENSMUST00000063588 Ankrd36D3Z4K0 1415 aa16.57■□□□□ 0.24
Vamp1-202ENSMUST00000063588 Mapkbp1Q6NS57 1503 aa16.57■□□□□ 0.24
Vamp1-202ENSMUST00000063588 Arhgef12Q8R4H2 1543 aaKnown RBP16.57■□□□□ 0.24
Vamp1-202ENSMUST00000063588 Supt5hO55201 1082 aaKnown RBP16.56■□□□□ 0.24
Vamp1-202ENSMUST00000063588 Fam163aQ8CAA5 168 aa16.56■□□□□ 0.24
Vamp1-202ENSMUST00000063588 Neo1P97798 1493 aa16.55■□□□□ 0.24
Vamp1-202ENSMUST00000063588 Adcy10Q8C0T9 1614 aa16.55■□□□□ 0.24
Vamp1-202ENSMUST00000063588 Jph4Q80WT0 628 aa16.53■□□□□ 0.24
Vamp1-202ENSMUST00000063588 Cul7Q8VE73 1689 aa16.52■□□□□ 0.23
Vamp1-202ENSMUST00000063588 Chd1P40201 1711 aa16.51■□□□□ 0.23
Vamp1-202ENSMUST00000063588 Arhgef40Q3UPH7 1517 aa16.49■□□□□ 0.23
Vamp1-202ENSMUST00000063588 Plekhh2Q8C115 1491 aa16.49■□□□□ 0.23
Vamp1-202ENSMUST00000063588 Prex2Q3LAC4 1598 aa16.49■□□□□ 0.23
Vamp1-202ENSMUST00000063588 Kiaa1210E9Q0C6 1637 aa16.48■□□□□ 0.23
Vamp1-202ENSMUST00000063588 Dennd4bQ3U1Y4 1499 aa16.48■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms