RNA–Protein interactions for RNA: ENSMUST00000062317.4

Shroom2-201, Transcript of Protein Shroom2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Shroom2, Length 6,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2-201ENSMUST00000062317 Ubl4bQ9CQ84 188 aa13.99□□□□□ -0.17
Shroom2-201ENSMUST00000062317 Vsig10D3YX43 558 aa13.98□□□□□ -0.17
Shroom2-201ENSMUST00000062317 Rgl3Q3UYI5 709 aa13.98□□□□□ -0.17
Shroom2-201ENSMUST00000062317 Setd5Q5XJV7 1441 aa13.97□□□□□ -0.17
Shroom2-201ENSMUST00000062317 Rsf1E9PWW9 1441 aaKnown RBP13.95□□□□□ -0.18
Shroom2-201ENSMUST00000062317 Apbb1Q9QXJ1 710 aa13.92□□□□□ -0.18
Shroom2-201ENSMUST00000062317 Ythdc1E9Q5K9 736 aaKnown RBP13.92□□□□□ -0.18
Shroom2-201ENSMUST00000062317 Gm13695A2AK44 830 aa13.91□□□□□ -0.18
Shroom2-201ENSMUST00000062317 Grwd1Q810D6 446 aaKnown RBP13.91□□□□□ -0.18
Shroom2-201ENSMUST00000062317 Arid4bA2CG63 1314 aaKnown RBP13.9□□□□□ -0.18
Shroom2-201ENSMUST00000062317 Slc4a3P16283 1227 aa13.88□□□□□ -0.19
Shroom2-201ENSMUST00000062317 Ccer2J3QPU5 274 aa13.88□□□□□ -0.19
Shroom2-201ENSMUST00000062317 Golga3P55937 1487 aa13.85□□□□□ -0.19
Shroom2-201ENSMUST00000062317 Ofd1Q80Z25 1017 aa13.85□□□□□ -0.19
Shroom2-201ENSMUST00000062317 Dbr1Q923B1 550 aa13.82□□□□□ -0.2
Shroom2-201ENSMUST00000062317 DekQ7TNV0 380 aaKnown RBP13.82□□□□□ -0.2
Shroom2-201ENSMUST00000062317 Baz1aO88379 1555 aa13.81□□□□□ -0.2
Shroom2-201ENSMUST00000062317 Hspa5P20029 655 aaKnown RBP13.81□□□□□ -0.2
Shroom2-201ENSMUST00000062317 CanxP35564 591 aaKnown RBP13.81□□□□□ -0.2
Shroom2-201ENSMUST00000062317 Kdm2aP59997 1161 aa13.79□□□□□ -0.2
Shroom2-201ENSMUST00000062317 Ecm2Q5FW85 670 aa13.79□□□□□ -0.2
Shroom2-201ENSMUST00000062317 Trim30dE9PWL0 497 aa13.79□□□□□ -0.2
Shroom2-201ENSMUST00000062317 Hsp90aa1P07901 733 aaKnown RBP13.79□□□□□ -0.2
Shroom2-201ENSMUST00000062317 Neurod2Q62414 383 aa13.78□□□□□ -0.2
Shroom2-201ENSMUST00000062317 Sin3aQ60520 1274 aaKnown RBP13.77□□□□□ -0.21
Shroom2-201ENSMUST00000062317 Ccdc88bQ4QRL3 1481 aa13.77□□□□□ -0.21
Shroom2-201ENSMUST00000062317 Wwc2Q6NXJ0 1187 aa13.77□□□□□ -0.21
Shroom2-201ENSMUST00000062317 Armcx1Q9CX83 456 aa13.76□□□□□ -0.21
Shroom2-201ENSMUST00000062317 Lmod3E9QA62 571 aa13.76□□□□□ -0.21
Shroom2-201ENSMUST00000062317 Irx6Q9ER75 438 aa13.76□□□□□ -0.21
Shroom2-201ENSMUST00000062317 Kif15Q6P9L6 1387 aa13.75□□□□□ -0.21
Shroom2-201ENSMUST00000062317 B4galnt3Q6L8S8 986 aa13.74□□□□□ -0.21
Shroom2-201ENSMUST00000062317 NacadQ5SWP3 1504 aa13.74□□□□□ -0.21
Shroom2-201ENSMUST00000062317 Hsp90ab1P11499 724 aaKnown RBP13.73□□□□□ -0.21
Shroom2-201ENSMUST00000062317 Spryd3E9Q9B3 442 aa13.71□□□□□ -0.21
Shroom2-201ENSMUST00000062317 Eea1Q8BL66 1411 aa13.71□□□□□ -0.22
Shroom2-201ENSMUST00000062317 Upf2A2AT37 1269 aaKnown RBP13.71□□□□□ -0.22
Shroom2-201ENSMUST00000062317 Card11Q8CIS0 1159 aa13.7□□□□□ -0.22
Shroom2-201ENSMUST00000062317 Arhgap27A2AB59 869 aa13.67□□□□□ -0.22
Shroom2-201ENSMUST00000062317 Bcl11aQ9QYE3 773 aa13.66□□□□□ -0.22
Shroom2-201ENSMUST00000062317 Cnga1P29974 684 aa13.64□□□□□ -0.23
Shroom2-201ENSMUST00000062317 Kdm5dQ62240 1548 aa13.63□□□□□ -0.23
Shroom2-201ENSMUST00000062317 Fgd1P52734 960 aa13.62□□□□□ -0.23
Shroom2-201ENSMUST00000062317 Rrp7aQ9D1C9 280 aaKnown RBP13.59□□□□□ -0.23
Shroom2-201ENSMUST00000062317 Mroh3A0A1D5RM54 893 aa13.59□□□□□ -0.23
Shroom2-201ENSMUST00000062317 Exoc6Q8R313 802 aa13.58□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Stk24Q99KH8 431 aa13.57□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Plcb2A3KGF7 1181 aa13.57□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Clstn2Q9ER65 966 aa13.56□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Hdac5Q9Z2V6 1113 aa13.56□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Ccdc27Q3V036 639 aa13.55□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Gm20521D3Z5F7 333 aa13.54□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Supt16hQ920B9 1047 aa13.54□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Gm6268A2A3U9 297 aa13.54□□□□□ -0.24
Shroom2-201ENSMUST00000062317 CatipB9EKE5 520 aa13.53□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Senp3Q9EP97 568 aaKnown RBP13.53□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Cep162Q6ZQ06 1403 aa13.52□□□□□ -0.24
Shroom2-201ENSMUST00000062317 Srpk2O54781 681 aaKnown RBP13.52□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Trim44Q9QXA7 346 aa13.52□□□□□ -0.25
Shroom2-201ENSMUST00000062317 1700019A02RikA0A087WPV9 146 aa13.51□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Nolc1E9Q5C9 702 aaKnown RBP13.51□□□□□ -0.25
Shroom2-201ENSMUST00000062317 NgefQ8CHT1 710 aa13.5□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Rundc1Q0VDN7 615 aa13.5□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Pkd2O35245 966 aa13.49□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Mtus2Q3UHD3 1353 aa13.49□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Exosc9Q9JHI7 438 aaKnown RBP13.48□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Ccdc18Q640L5 1455 aa13.48□□□□□ -0.25
Shroom2-201ENSMUST00000062317 PtmaP26350 111 aa13.48□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Safb2Q80YR5 991 aaKnown RBP13.46□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Plin1Q8CGN5 517 aa13.46□□□□□ -0.25
Shroom2-201ENSMUST00000062317 Cwc22Q8C5N3 908 aaKnown RBP13.45□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Stag3O70576 1240 aa13.44□□□□□ -0.26
Shroom2-201ENSMUST00000062317 IqubQ8CDK3 788 aa13.42□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Cabp1Q9JLK7 227 aa13.42□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Trak1Q6PD31 939 aa13.42□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Rtn4Q99P72 1162 aaKnown RBP13.41□□□□□ -0.26
Shroom2-201ENSMUST00000062317 ChgaP26339 463 aaKnown RBP13.41□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Speer4f1Q9D5Q6 258 aa13.41□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Mia2Q91ZV0 1396 aa13.41□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Ifit1bl1D3Z6F0 470 aa13.4□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Mapk8ip3Q9ESN9 1337 aa13.4□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Mphosph9A6H5Y1 991 aa13.4□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Aebp1Q640N1 1128 aa13.4□□□□□ -0.26
Shroom2-201ENSMUST00000062317 Map4P27546 1125 aaKnown RBP13.38□□□□□ -0.27
Shroom2-201ENSMUST00000062317 CrbnQ8C7D2 445 aa13.38□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Znf330Q922H9 316 aa13.38□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Cluap1Q8R3P7 413 aa13.37□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Ercc6F8VPZ5 1481 aa13.37□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Rapgef2Q8CHG7 1496 aa13.37□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Ppm1gQ61074 542 aa13.37□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Rwdd1Q9CQK7 243 aa13.36□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Cecr2E9Q2Z1 1453 aa13.36□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Tcerg1Q8CGF7 1100 aaKnown RBP13.36□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Ccdc9Q8VC31 543 aaKnown RBP13.36□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Chmp5Q9D7S9 219 aa13.36□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Kif27Q7M6Z4 1394 aa13.36□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Stk26Q99JT2 416 aa13.35□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Irx3P81067 507 aa13.34□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Htatsf1Q8BGC0 757 aa13.34□□□□□ -0.27
Shroom2-201ENSMUST00000062317 Baz1bQ9Z277 1479 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 124.8 ms