RNA–Protein interactions for RNA: ENSMUST00000054990.10

Trim2-201, Transcript of Tripartite motif-containing protein 2, mousemouse

TSL 1 (best) BASIC

Gene Trim2, Length 3,816 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim2-201ENSMUST00000054990 Smarca4Q3TKT4 1613 aaKnown RBP12.72□□□□□ -0.37
Trim2-201ENSMUST00000054990 Cc2d2aQ8CFW7 1633 aa12.72□□□□□ -0.37
Trim2-201ENSMUST00000054990 Sin3aQ60520 1274 aaKnown RBP12.72□□□□□ -0.37
Trim2-201ENSMUST00000054990 Cep162Q6ZQ06 1403 aa12.71□□□□□ -0.37
Trim2-201ENSMUST00000054990 Rapgef2Q8CHG7 1496 aa12.68□□□□□ -0.38
Trim2-201ENSMUST00000054990 Prdm10Q3UTQ7 1184 aa12.65□□□□□ -0.38
Trim2-201ENSMUST00000054990 Kif15Q6P9L6 1387 aa12.65□□□□□ -0.38
Trim2-201ENSMUST00000054990 Slc4a3P16283 1227 aa12.65□□□□□ -0.38
Trim2-201ENSMUST00000054990 Wdr43Q6ZQL4 677 aaKnown RBP12.63□□□□□ -0.39
Trim2-201ENSMUST00000054990 Ubl4bQ9CQ84 188 aa12.62□□□□□ -0.39
Trim2-201ENSMUST00000054990 Bcl11aQ9QYE3 773 aa12.61□□□□□ -0.39
Trim2-201ENSMUST00000054990 NeflP08551 543 aa12.6□□□□□ -0.39
Trim2-201ENSMUST00000054990 Fkbp15Q6P9Q6 1216 aaKnown RBP12.6□□□□□ -0.39
Trim2-201ENSMUST00000054990 Eea1Q8BL66 1411 aa12.6□□□□□ -0.39
Trim2-201ENSMUST00000054990 ArxO35085 564 aa12.6□□□□□ -0.39
Trim2-201ENSMUST00000054990 Rad21Q61550 635 aaKnown RBP12.59□□□□□ -0.39
Trim2-201ENSMUST00000054990 Wwc2Q6NXJ0 1187 aa12.58□□□□□ -0.4
Trim2-201ENSMUST00000054990 DaxxO35613 739 aa12.58□□□□□ -0.4
Trim2-201ENSMUST00000054990 Nolc1E9Q5C9 702 aaKnown RBP12.56□□□□□ -0.4
Trim2-201ENSMUST00000054990 Iqgap2Q3UQ44 1575 aa12.56□□□□□ -0.4
Trim2-201ENSMUST00000054990 Os9Q8K2C7 672 aa12.54□□□□□ -0.4
Trim2-201ENSMUST00000054990 Fmn1Q05860 1466 aa12.54□□□□□ -0.4
Trim2-201ENSMUST00000054990 Top2aQ01320 1528 aaKnown RBP12.54□□□□□ -0.4
Trim2-201ENSMUST00000054990 Rtl5Q5DTT4 599 aa12.51□□□□□ -0.41
Trim2-201ENSMUST00000054990 Anp32bQ9EST5 272 aaKnown RBP12.51□□□□□ -0.41
Trim2-201ENSMUST00000054990 Rgl3Q3UYI5 709 aa12.51□□□□□ -0.41
Trim2-201ENSMUST00000054990 Ifnlr1Q8CGK5 535 aa12.51□□□□□ -0.41
Trim2-201ENSMUST00000054990 Atad2bE9Q166 1460 aaKnown RBP12.51□□□□□ -0.41
Trim2-201ENSMUST00000054990 Wdr62Q3U3T8 1523 aa12.5□□□□□ -0.41
Trim2-201ENSMUST00000054990 Grwd1Q810D6 446 aaKnown RBP12.47□□□□□ -0.41
Trim2-201ENSMUST00000054990 Ccer2J3QPU5 274 aa12.46□□□□□ -0.41
Trim2-201ENSMUST00000054990 Supt16hQ920B9 1047 aa12.46□□□□□ -0.41
Trim2-201ENSMUST00000054990 Erich6D3Z6S9 713 aa12.45□□□□□ -0.42
Trim2-201ENSMUST00000054990 Ofd1Q80Z25 1017 aa12.44□□□□□ -0.42
Trim2-201ENSMUST00000054990 Rangap1P46061 589 aaKnown RBP12.43□□□□□ -0.42
Trim2-201ENSMUST00000054990 Fam135aQ6NS59 1506 aa12.42□□□□□ -0.42
Trim2-201ENSMUST00000054990 Eif4g1Q6NZJ6 1600 aaKnown RBP12.41□□□□□ -0.42
Trim2-201ENSMUST00000054990 Gm13697A2AK42 830 aa12.41□□□□□ -0.42
Trim2-201ENSMUST00000054990 TnnQ80Z71 1560 aa12.41□□□□□ -0.42
Trim2-201ENSMUST00000054990 Pds5bQ4VA53 1446 aaKnown RBP12.41□□□□□ -0.42
Trim2-201ENSMUST00000054990 Exoc6Q8R313 802 aa12.41□□□□□ -0.42
Trim2-201ENSMUST00000054990 Polr3glQ8R0C0 218 aa12.4□□□□□ -0.42
Trim2-201ENSMUST00000054990 Frmpd1A2AKB4 1549 aa12.39□□□□□ -0.43
Trim2-201ENSMUST00000054990 Znf710Q3U288 666 aa12.39□□□□□ -0.43
Trim2-201ENSMUST00000054990 Baz1bQ9Z277 1479 aa12.39□□□□□ -0.43
Trim2-201ENSMUST00000054990 Apbb1Q9QXJ1 710 aa12.38□□□□□ -0.43
Trim2-201ENSMUST00000054990 PtprkP35822 1457 aa12.35□□□□□ -0.43
Trim2-201ENSMUST00000054990 PrkcshO08795 521 aa12.34□□□□□ -0.43
Trim2-201ENSMUST00000054990 Dbr1Q923B1 550 aa12.34□□□□□ -0.43
Trim2-201ENSMUST00000054990 B4galnt3Q6L8S8 986 aa12.32□□□□□ -0.44
Trim2-201ENSMUST00000054990 Ccdc18Q640L5 1455 aa12.31□□□□□ -0.44
Trim2-201ENSMUST00000054990 Aebp1Q640N1 1128 aa12.31□□□□□ -0.44
Trim2-201ENSMUST00000054990 Pkd2O35245 966 aa12.3□□□□□ -0.44
Trim2-201ENSMUST00000054990 Cabp1Q9JLK7 227 aa12.29□□□□□ -0.44
Trim2-201ENSMUST00000054990 Ncapd3Q6ZQK0 1506 aa12.29□□□□□ -0.44
Trim2-201ENSMUST00000054990 Ercc6F8VPZ5 1481 aa12.28□□□□□ -0.44
Trim2-201ENSMUST00000054990 Pak3Q61036 559 aa12.28□□□□□ -0.44
Trim2-201ENSMUST00000054990 Nlrp6Q91WS2 869 aa12.28□□□□□ -0.44
Trim2-201ENSMUST00000054990 Card11Q8CIS0 1159 aa12.27□□□□□ -0.45
Trim2-201ENSMUST00000054990 CanxP35564 591 aaKnown RBP12.27□□□□□ -0.45
Trim2-201ENSMUST00000054990 Mphosph9A6H5Y1 991 aa12.26□□□□□ -0.45
Trim2-201ENSMUST00000054990 Arap1Q4LDD4 1452 aa12.26□□□□□ -0.45
Trim2-201ENSMUST00000054990 Trim26Q99PN3 545 aa12.26□□□□□ -0.45
Trim2-201ENSMUST00000054990 Lamc3Q9R0B6 1581 aa12.25□□□□□ -0.45
Trim2-201ENSMUST00000054990 Arhgap35Q91YM2 1499 aa12.25□□□□□ -0.45
Trim2-201ENSMUST00000054990 Ecm2Q5FW85 670 aa12.25□□□□□ -0.45
Trim2-201ENSMUST00000054990 Cux2P70298 1426 aa12.24□□□□□ -0.45
Trim2-201ENSMUST00000054990 Neurod2Q62414 383 aa12.23□□□□□ -0.45
Trim2-201ENSMUST00000054990 Smg6P61406 1418 aaKnown RBP12.23□□□□□ -0.45
Trim2-201ENSMUST00000054990 Mia2Q91ZV0 1396 aa12.23□□□□□ -0.45
Trim2-201ENSMUST00000054990 ChgaP26339 463 aaKnown RBP12.23□□□□□ -0.45
Trim2-201ENSMUST00000054990 Arhgap27A2AB59 869 aa12.22□□□□□ -0.45
Trim2-201ENSMUST00000054990 Rundc1Q0VDN7 615 aa12.22□□□□□ -0.45
Trim2-201ENSMUST00000054990 Hsp90aa1P07901 733 aaKnown RBP12.22□□□□□ -0.45
Trim2-201ENSMUST00000054990 Kcnh8P59111 1102 aa12.22□□□□□ -0.45
Trim2-201ENSMUST00000054990 Rpap1Q80TE0 1409 aa12.22□□□□□ -0.45
Trim2-201ENSMUST00000054990 Kdm2aP59997 1161 aa12.21□□□□□ -0.45
Trim2-201ENSMUST00000054990 Ccdc27Q3V036 639 aa12.2□□□□□ -0.46
Trim2-201ENSMUST00000054990 NrkQ9R0G8 1455 aa12.2□□□□□ -0.46
Trim2-201ENSMUST00000054990 Zfp644E9QA22 1323 aa12.2□□□□□ -0.46
Trim2-201ENSMUST00000054990 Arid4bA2CG63 1314 aaKnown RBP12.2□□□□□ -0.46
Trim2-201ENSMUST00000054990 Trim30dE9PWL0 497 aa12.19□□□□□ -0.46
Trim2-201ENSMUST00000054990 Trak1Q6PD31 939 aa12.19□□□□□ -0.46
Trim2-201ENSMUST00000054990 Armcx1Q9CX83 456 aa12.18□□□□□ -0.46
Trim2-201ENSMUST00000054990 Spryd3E9Q9B3 442 aa12.17□□□□□ -0.46
Trim2-201ENSMUST00000054990 Slc4a2P13808 1237 aaKnown RBP12.16□□□□□ -0.46
Trim2-201ENSMUST00000054990 4930567H17RikQ3V0K5 233 aa12.16□□□□□ -0.46
Trim2-201ENSMUST00000054990 Fyco1Q8VDC1 1437 aa12.16□□□□□ -0.46
Trim2-201ENSMUST00000054990 Camsap1A2AHC3 1581 aa12.16□□□□□ -0.46
Trim2-201ENSMUST00000054990 AqrQ8CFQ3 1481 aaKnown RBP12.15□□□□□ -0.46
Trim2-201ENSMUST00000054990 Vsig10D3YX43 558 aa12.14□□□□□ -0.47
Trim2-201ENSMUST00000054990 Ccnb3Q810T2 1396 aa12.14□□□□□ -0.47
Trim2-201ENSMUST00000054990 Kif27Q7M6Z4 1394 aa12.13□□□□□ -0.47
Trim2-201ENSMUST00000054990 Atp1b4Q99ME6 356 aa12.13□□□□□ -0.47
Trim2-201ENSMUST00000054990 Naip1Q9QWK5 1403 aa12.13□□□□□ -0.47
Trim2-201ENSMUST00000054990 Tcerg1Q8CGF7 1100 aaKnown RBP12.13□□□□□ -0.47
Trim2-201ENSMUST00000054990 CntlnA2AM05 1397 aa12.12□□□□□ -0.47
Trim2-201ENSMUST00000054990 Gpatch8A2A6A1 1505 aa12.12□□□□□ -0.47
Trim2-201ENSMUST00000054990 Shroom4Q1W617 1475 aa12.12□□□□□ -0.47
Trim2-201ENSMUST00000054990 Gm13695A2AK44 830 aa12.11□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms