RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Hsp90ab1P11499 724 aaKnown RBP14.11□□□□□ -0.15
Nipbl-201ENSMUST00000052965 Adam1bQ8R534 806 aa14.11□□□□□ -0.15
Nipbl-201ENSMUST00000052965 Chic1Q8CBW7 227 aa14.1□□□□□ -0.15
Nipbl-201ENSMUST00000052965 Mrs2Q5NCE8 434 aa14.09□□□□□ -0.15
Nipbl-201ENSMUST00000052965 Zbtb7cQ8VCZ7 619 aa14.07□□□□□ -0.16
Nipbl-201ENSMUST00000052965 Aebp2Q9Z248 504 aaKnown RBP14.06□□□□□ -0.16
Nipbl-201ENSMUST00000052965 Pknox2Q8BG99 474 aa14.05□□□□□ -0.16
Nipbl-201ENSMUST00000052965 Gtf3c3Q3TMP1 882 aa14.04□□□□□ -0.16
Nipbl-201ENSMUST00000052965 Trim30dE9PWL0 497 aa14.03□□□□□ -0.16
Nipbl-201ENSMUST00000052965 Polr3glQ8R0C0 218 aa14.02□□□□□ -0.17
Nipbl-201ENSMUST00000052965 Golga3P55937 1487 aa14.01□□□□□ -0.17
Nipbl-201ENSMUST00000052965 PtmaP26350 111 aa14□□□□□ -0.17
Nipbl-201ENSMUST00000052965 BlmO88700 1416 aa14□□□□□ -0.17
Nipbl-201ENSMUST00000052965 Erich6D3Z6S9 713 aa13.98□□□□□ -0.17
Nipbl-201ENSMUST00000052965 Ipo9Q91YE6 1041 aa13.98□□□□□ -0.17
Nipbl-201ENSMUST00000052965 4933402E13RikQ9D4D2 429 aa13.98□□□□□ -0.17
Nipbl-201ENSMUST00000052965 SafbD3YXK2 937 aaKnown RBP13.96□□□□□ -0.18
Nipbl-201ENSMUST00000052965 Tcerg1Q8CGF7 1100 aaKnown RBP13.96□□□□□ -0.18
Nipbl-201ENSMUST00000052965 Gm13697A2AK42 830 aa13.95□□□□□ -0.18
Nipbl-201ENSMUST00000052965 Ofd1Q80Z25 1017 aa13.94□□□□□ -0.18
Nipbl-201ENSMUST00000052965 Supt16hQ920B9 1047 aa13.94□□□□□ -0.18
Nipbl-201ENSMUST00000052965 Mbd3Q9Z2D8 285 aaKnown RBP13.93□□□□□ -0.18
Nipbl-201ENSMUST00000052965 Setd5Q5XJV7 1441 aa13.91□□□□□ -0.18
Nipbl-201ENSMUST00000052965 Zbtb4Q5F293 982 aa13.91□□□□□ -0.18
Nipbl-201ENSMUST00000052965 Dnttip2Q8R2M2 758 aaKnown RBP13.91□□□□□ -0.18
Nipbl-201ENSMUST00000052965 Plcb2A3KGF7 1181 aa13.9□□□□□ -0.18
Nipbl-201ENSMUST00000052965 Rrp12Q6P5B0 1295 aaKnown RBP13.9□□□□□ -0.18
Nipbl-201ENSMUST00000052965 Atp1b4Q99ME6 356 aa13.89□□□□□ -0.19
Nipbl-201ENSMUST00000052965 Eea1Q8BL66 1411 aa13.89□□□□□ -0.19
Nipbl-201ENSMUST00000052965 Clstn2Q9ER65 966 aa13.89□□□□□ -0.19
Nipbl-201ENSMUST00000052965 Rad21Q61550 635 aaKnown RBP13.88□□□□□ -0.19
Nipbl-201ENSMUST00000052965 Kdm5dQ62240 1548 aa13.87□□□□□ -0.19
Nipbl-201ENSMUST00000052965 Vsig10D3YX43 558 aa13.87□□□□□ -0.19
Nipbl-201ENSMUST00000052965 Ccdc18Q640L5 1455 aa13.85□□□□□ -0.19
Nipbl-201ENSMUST00000052965 MsnP26041 577 aaKnown RBP13.85□□□□□ -0.19
Nipbl-201ENSMUST00000052965 Dnai1Q8C0M8 701 aa13.84□□□□□ -0.19
Nipbl-201ENSMUST00000052965 Map7O88735 730 aa13.82□□□□□ -0.2
Nipbl-201ENSMUST00000052965 P3h3Q8CG70 732 aa13.8□□□□□ -0.2
Nipbl-201ENSMUST00000052965 Rsf1E9PWW9 1441 aaKnown RBP13.8□□□□□ -0.2
Nipbl-201ENSMUST00000052965 Ubl4bQ9CQ84 188 aa13.8□□□□□ -0.2
Nipbl-201ENSMUST00000052965 Ddrgk1Q80WW9 315 aa13.79□□□□□ -0.2
Nipbl-201ENSMUST00000052965 Chic2Q9D9G3 165 aa13.78□□□□□ -0.2
Nipbl-201ENSMUST00000052965 PrkcshO08795 521 aa13.78□□□□□ -0.2
Nipbl-201ENSMUST00000052965 Map7d2A2AG50 781 aa13.77□□□□□ -0.2
Nipbl-201ENSMUST00000052965 Calcoco2A2A6M5 331 aa13.77□□□□□ -0.2
Nipbl-201ENSMUST00000052965 Erich6bQ9D4S6 220 aa13.77□□□□□ -0.2
Nipbl-201ENSMUST00000052965 Gm13695A2AK44 830 aa13.77□□□□□ -0.2
Nipbl-201ENSMUST00000052965 Taok2Q6ZQ29 1240 aa13.77□□□□□ -0.2
Nipbl-201ENSMUST00000052965 PtmsQ9D0J8 101 aaKnown RBP13.77□□□□□ -0.21
Nipbl-201ENSMUST00000052965 Cwc22Q8C5N3 908 aaKnown RBP13.77□□□□□ -0.21
Nipbl-201ENSMUST00000052965 Pdcl3Q8BVF2 240 aa13.76□□□□□ -0.21
Nipbl-201ENSMUST00000052965 Mia2Q91ZV0 1396 aa13.76□□□□□ -0.21
Nipbl-201ENSMUST00000052965 Ercc6F8VPZ5 1481 aa13.76□□□□□ -0.21
Nipbl-201ENSMUST00000052965 Prdm10Q3UTQ7 1184 aa13.76□□□□□ -0.21
Nipbl-201ENSMUST00000052965 Ifnlr1Q8CGK5 535 aa13.75□□□□□ -0.21
Nipbl-201ENSMUST00000052965 Casc1Q6TDU8 730 aa13.72□□□□□ -0.21
Nipbl-201ENSMUST00000052965 Chmp4bQ9D8B3 224 aaKnown RBP13.71□□□□□ -0.22
Nipbl-201ENSMUST00000052965 Znf316Q6PGE4 1016 aa13.7□□□□□ -0.22
Nipbl-201ENSMUST00000052965 EspnQ9ET47 871 aa13.7□□□□□ -0.22
Nipbl-201ENSMUST00000052965 VgfQ0VGU4 617 aa13.69□□□□□ -0.22
Nipbl-201ENSMUST00000052965 Kif15Q6P9L6 1387 aa13.69□□□□□ -0.22
Nipbl-201ENSMUST00000052965 Fkbp15Q6P9Q6 1216 aaKnown RBP13.69□□□□□ -0.22
Nipbl-201ENSMUST00000052965 Spryd3E9Q9B3 442 aa13.68□□□□□ -0.22
Nipbl-201ENSMUST00000052965 Znf326O88291 580 aa13.66□□□□□ -0.22
Nipbl-201ENSMUST00000052965 Becn1O88597 448 aa13.66□□□□□ -0.22
Nipbl-201ENSMUST00000052965 KnstrnQ9D9Z1 312 aaKnown RBP13.66□□□□□ -0.22
Nipbl-201ENSMUST00000052965 Mapk8ip3Q9ESN9 1337 aa13.65□□□□□ -0.22
Nipbl-201ENSMUST00000052965 Fmn1Q05860 1466 aa13.65□□□□□ -0.22
Nipbl-201ENSMUST00000052965 Chmp5Q9D7S9 219 aa13.65□□□□□ -0.22
Nipbl-201ENSMUST00000052965 Arid4bA2CG63 1314 aaKnown RBP13.65□□□□□ -0.22
Nipbl-201ENSMUST00000052965 Ush1cQ9ES64 910 aa13.64□□□□□ -0.23
Nipbl-201ENSMUST00000052965 Mre11Q61216 706 aa13.64□□□□□ -0.23
Nipbl-201ENSMUST00000052965 Fgd1P52734 960 aa13.64□□□□□ -0.23
Nipbl-201ENSMUST00000052965 Rgl3Q3UYI5 709 aa13.63□□□□□ -0.23
Nipbl-201ENSMUST00000052965 Slc4a3P16283 1227 aa13.63□□□□□ -0.23
Nipbl-201ENSMUST00000052965 Rrp9Q91WM3 475 aaKnown RBP13.63□□□□□ -0.23
Nipbl-201ENSMUST00000052965 Rwdd1Q9CQK7 243 aa13.63□□□□□ -0.23
Nipbl-201ENSMUST00000052965 Gm973E9Q295 1059 aa13.63□□□□□ -0.23
Nipbl-201ENSMUST00000052965 B4galnt3Q6L8S8 986 aa13.62□□□□□ -0.23
Nipbl-201ENSMUST00000052965 Crybg2B7ZCC2 1516 aa13.61□□□□□ -0.23
Nipbl-201ENSMUST00000052965 Fbxo2Q80UW2 297 aa13.61□□□□□ -0.23
Nipbl-201ENSMUST00000052965 RdxP26043 583 aaKnown RBP13.6□□□□□ -0.23
Nipbl-201ENSMUST00000052965 Ipo8Q7TMY7 1010 aa13.6□□□□□ -0.23
Nipbl-201ENSMUST00000052965 Mtus2Q3UHD3 1353 aa13.59□□□□□ -0.23
Nipbl-201ENSMUST00000052965 Nolc1E9Q5C9 702 aaKnown RBP13.59□□□□□ -0.23
Nipbl-201ENSMUST00000052965 Fhad1A6PWD2 1420 aa13.59□□□□□ -0.23
Nipbl-201ENSMUST00000052965 SetQ9EQU5 289 aaKnown RBP13.59□□□□□ -0.23
Nipbl-201ENSMUST00000052965 BccipQ9CWI3 316 aa13.58□□□□□ -0.24
Nipbl-201ENSMUST00000052965 Card11Q8CIS0 1159 aa13.58□□□□□ -0.24
Nipbl-201ENSMUST00000052965 Rtn4Q99P72 1162 aaKnown RBP13.57□□□□□ -0.24
Nipbl-201ENSMUST00000052965 Mak16Q8BGS0 296 aaKnown RBP13.57□□□□□ -0.24
Nipbl-201ENSMUST00000052965 Cttnbp2B9EJA2 1648 aa13.56□□□□□ -0.24
Nipbl-201ENSMUST00000052965 Plcd4Q8K3R3 807 aa13.56□□□□□ -0.24
Nipbl-201ENSMUST00000052965 Dbr1Q923B1 550 aa13.56□□□□□ -0.24
Nipbl-201ENSMUST00000052965 Ipo4Q8VI75 1082 aa13.56□□□□□ -0.24
Nipbl-201ENSMUST00000052965 Smarca2Q6DIC0 1577 aa13.56□□□□□ -0.24
Nipbl-201ENSMUST00000052965 Cald1E9QA15 768 aaKnown RBP13.55□□□□□ -0.24
Nipbl-201ENSMUST00000052965 CntlnA2AM05 1397 aa13.54□□□□□ -0.24
Nipbl-201ENSMUST00000052965 Rangap1P46061 589 aaKnown RBP13.54□□□□□ -0.24
Nipbl-201ENSMUST00000052965 Trim26Q99PN3 545 aa13.53□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 87.6 ms