RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Kif15Q6P9L6 1387 aa23.46■■□□□ 1.35
Ttc39b-202ENSMUST00000048274 Ankrd26Q811D2 1581 aa23.45■■□□□ 1.34
Ttc39b-202ENSMUST00000048274 Baz1bQ9Z277 1479 aa23.43■■□□□ 1.34
Ttc39b-202ENSMUST00000048274 Naip1Q9QWK5 1403 aa23.41■■□□□ 1.34
Ttc39b-202ENSMUST00000048274 Lmo7E9PYF4 1699 aaKnown RBP23.36■■□□□ 1.33
Ttc39b-202ENSMUST00000048274 Pcf11G3X9Z4 1553 aa23.33■■□□□ 1.33
Ttc39b-202ENSMUST00000048274 Peg3Q3URU2 1571 aa23.32■■□□□ 1.32
Ttc39b-202ENSMUST00000048274 Phldb1Q6PDH0 1371 aaKnown RBP23.32■■□□□ 1.32
Ttc39b-202ENSMUST00000048274 Slx4Q6P1D7 1565 aa23.28■■□□□ 1.32
Ttc39b-202ENSMUST00000048274 CntlnA2AM05 1397 aa23.25■■□□□ 1.31
Ttc39b-202ENSMUST00000048274 Efcab5A0JP43 1406 aa23.22■■□□□ 1.31
Ttc39b-202ENSMUST00000048274 Carmil1Q6EDY6 1374 aa23.21■■□□□ 1.31
Ttc39b-202ENSMUST00000048274 BlmO88700 1416 aa23.21■■□□□ 1.31
Ttc39b-202ENSMUST00000048274 UacaQ8CGB3 1411 aa23.2■■□□□ 1.31
Ttc39b-202ENSMUST00000048274 Ppargc1bQ8VHJ7 1014 aa23.18■■□□□ 1.3
Ttc39b-202ENSMUST00000048274 Ankrd36D3Z4K0 1415 aa23.17■■□□□ 1.3
Ttc39b-202ENSMUST00000048274 Myt1Q8CFC2 1127 aa23.17■■□□□ 1.3
Ttc39b-202ENSMUST00000048274 Fhad1A6PWD2 1420 aa23.16■■□□□ 1.3
Ttc39b-202ENSMUST00000048274 Il27Q8K3I6 234 aa23.15■■□□□ 1.3
Ttc39b-202ENSMUST00000048274 Ap3b1Q9Z1T1 1105 aa23.15■■□□□ 1.3
Ttc39b-202ENSMUST00000048274 CenpbP27790 599 aa23.14■■□□□ 1.29
Ttc39b-202ENSMUST00000048274 Ccer2J3QPU5 274 aa23.13■■□□□ 1.29
Ttc39b-202ENSMUST00000048274 Urb2E9Q7L1 1524 aaKnown RBP23.12■■□□□ 1.29
Ttc39b-202ENSMUST00000048274 Cux1P53564 1515 aa23.12■■□□□ 1.29
Ttc39b-202ENSMUST00000048274 Fyco1Q8VDC1 1437 aa23.11■■□□□ 1.29
Ttc39b-202ENSMUST00000048274 Mia2Q91ZV0 1396 aa23.11■■□□□ 1.29
Ttc39b-202ENSMUST00000048274 Mrc2Q64449 1479 aa23.11■■□□□ 1.29
Ttc39b-202ENSMUST00000048274 Tnnt3Q9QZ47 272 aa23.1■■□□□ 1.29
Ttc39b-202ENSMUST00000048274 Camsap2Q8C1B1 1461 aa23.09■■□□□ 1.29
Ttc39b-202ENSMUST00000048274 3425401B19RikD3Z1D3 1412 aa23.09■■□□□ 1.29
Ttc39b-202ENSMUST00000048274 Ubl4bQ9CQ84 188 aa23.09■■□□□ 1.29
Ttc39b-202ENSMUST00000048274 Eid3Q3V124 375 aa23.08■■□□□ 1.28
Ttc39b-202ENSMUST00000048274 Vps8Q0P5W1 1427 aa23.07■■□□□ 1.28
Ttc39b-202ENSMUST00000048274 Crocc2F6XLV1 1638 aa23.06■■□□□ 1.28
Ttc39b-202ENSMUST00000048274 Polr1aO35134 1717 aaKnown RBP23.04■■□□□ 1.28
Ttc39b-202ENSMUST00000048274 PogzQ8BZH4 1409 aaKnown RBP23.04■■□□□ 1.28
Ttc39b-202ENSMUST00000048274 Rpap1Q80TE0 1409 aa23.03■■□□□ 1.28
Ttc39b-202ENSMUST00000048274 Cux2P70298 1426 aa23.02■■□□□ 1.28
Ttc39b-202ENSMUST00000048274 LrpprcQ6PB66 1392 aaKnown RBP23■■□□□ 1.27
Ttc39b-202ENSMUST00000048274 SynmQ70IV5 1561 aa22.99■■□□□ 1.27
Ttc39b-202ENSMUST00000048274 Duox2A2AQ99 1517 aa22.98■■□□□ 1.27
Ttc39b-202ENSMUST00000048274 Gm1043A0A140LJC2 1431 aa22.98■■□□□ 1.27
Ttc39b-202ENSMUST00000048274 Naip2Q9QUK4 1447 aa22.97■■□□□ 1.27
Ttc39b-202ENSMUST00000048274 Dhx29Q6PGC1 1365 aaKnown RBP22.97■■□□□ 1.27
Ttc39b-202ENSMUST00000048274 Fhod3Q76LL6 1578 aa22.95■■□□□ 1.26
Ttc39b-202ENSMUST00000048274 Gm13697A2AK42 830 aa22.94■■□□□ 1.26
Ttc39b-202ENSMUST00000048274 Gm7298A0A0N4SVU1 1476 aa22.92■■□□□ 1.26
Ttc39b-202ENSMUST00000048274 Cul7Q8VE73 1689 aa22.91■■□□□ 1.26
Ttc39b-202ENSMUST00000048274 Stra8P70278 393 aa22.87■■□□□ 1.25
Ttc39b-202ENSMUST00000048274 Kif21aQ9QXL2 1672 aa22.87■■□□□ 1.25
Ttc39b-202ENSMUST00000048274 Lmtk2Q3TYD6 1471 aa22.86■■□□□ 1.25
Ttc39b-202ENSMUST00000048274 Npm1Q61937 292 aaKnown RBP22.85■■□□□ 1.25
Ttc39b-202ENSMUST00000048274 Samd9lQ69Z37 1561 aa22.85■■□□□ 1.25
Ttc39b-202ENSMUST00000048274 Aebp1Q640N1 1128 aa22.83■■□□□ 1.25
Ttc39b-202ENSMUST00000048274 Fam50aQ9WV03 339 aaKnown RBP22.83■■□□□ 1.25
Ttc39b-202ENSMUST00000048274 Ncoa2Q61026 1462 aa22.81■■□□□ 1.24
Ttc39b-202ENSMUST00000048274 A2mQ6GQT1 1474 aa22.81■■□□□ 1.24
Ttc39b-202ENSMUST00000048274 NclP09405 707 aaKnown RBP22.8■■□□□ 1.24
Ttc39b-202ENSMUST00000048274 Hnrnpul2Q00PI9 745 aaKnown RBP22.8■■□□□ 1.24
Ttc39b-202ENSMUST00000048274 Dennd4bQ3U1Y4 1499 aa22.79■■□□□ 1.24
Ttc39b-202ENSMUST00000048274 Znf710Q3U288 666 aa22.79■■□□□ 1.24
Ttc39b-202ENSMUST00000048274 Naip5Q9R016 1403 aa22.78■■□□□ 1.24
Ttc39b-202ENSMUST00000048274 Lmod2Q3UHZ5 550 aa22.75■■□□□ 1.23
Ttc39b-202ENSMUST00000048274 Hspa5P20029 655 aaKnown RBP22.74■■□□□ 1.23
Ttc39b-202ENSMUST00000048274 Setbp1Q9Z180 1582 aa22.73■■□□□ 1.23
Ttc39b-202ENSMUST00000048274 Gcc2Q8CHG3 1679 aa22.73■■□□□ 1.23
Ttc39b-202ENSMUST00000048274 Abca5Q8K448 1642 aa22.73■■□□□ 1.23
Ttc39b-202ENSMUST00000048274 Lrriq1Q0P5X1 1673 aa22.69■■□□□ 1.22
Ttc39b-202ENSMUST00000048274 Rfx7F8VPJ6 1459 aa22.68■■□□□ 1.22
Ttc39b-202ENSMUST00000048274 EprsQ8CGC7 1512 aaKnown RBP22.67■■□□□ 1.22
Ttc39b-202ENSMUST00000048274 Pprc1Q6NZN1 1644 aa22.65■■□□□ 1.22
Ttc39b-202ENSMUST00000048274 Ccnb3Q810T2 1396 aa22.65■■□□□ 1.22
Ttc39b-202ENSMUST00000048274 Gpatch8A2A6A1 1505 aa22.64■■□□□ 1.21
Ttc39b-202ENSMUST00000048274 Smg6P61406 1418 aaKnown RBP22.63■■□□□ 1.21
Ttc39b-202ENSMUST00000048274 Pla2r1Q62028 1487 aa22.63■■□□□ 1.21
Ttc39b-202ENSMUST00000048274 Rad54l2Q99NG0 1466 aa22.62■■□□□ 1.21
Ttc39b-202ENSMUST00000048274 Gm38655A0A286YDK6 273 aa22.61■■□□□ 1.21
Ttc39b-202ENSMUST00000048274 CadpsQ80TJ1 1355 aa22.6■■□□□ 1.21
Ttc39b-202ENSMUST00000048274 Magi3Q9EQJ9 1476 aa22.55■■□□□ 1.2
Ttc39b-202ENSMUST00000048274 SafbD3YXK2 937 aaKnown RBP22.54■■□□□ 1.2
Ttc39b-202ENSMUST00000048274 Adamts12Q811B3 1600 aa22.53■■□□□ 1.2
Ttc39b-202ENSMUST00000048274 NexmifQ5DTT1 1515 aa22.52■■□□□ 1.2
Ttc39b-202ENSMUST00000048274 Mapk8ip2Q9ERE9 830 aa22.51■■□□□ 1.19
Ttc39b-202ENSMUST00000048274 Kif27Q7M6Z4 1394 aa22.51■■□□□ 1.19
Ttc39b-202ENSMUST00000048274 Soga1E1U8D0 1418 aa22.49■■□□□ 1.19
Ttc39b-202ENSMUST00000048274 Shroom2A2ALU4 1481 aa22.48■■□□□ 1.19
Ttc39b-202ENSMUST00000048274 BC005561E9Q5E2 1589 aa22.48■■□□□ 1.19
Ttc39b-202ENSMUST00000048274 Lamc1P02468 1607 aaKnown RBP22.47■■□□□ 1.19
Ttc39b-202ENSMUST00000048274 Mug1P28665 1476 aa22.47■■□□□ 1.19
Ttc39b-202ENSMUST00000048274 Anp32aO35381 247 aa22.46■■□□□ 1.19
Ttc39b-202ENSMUST00000048274 Ift140E9PY46 1464 aa22.46■■□□□ 1.19
Ttc39b-202ENSMUST00000048274 Ncoa1P70365 1447 aa22.45■■□□□ 1.18
Ttc39b-202ENSMUST00000048274 Rprd2Q6NXI6 1469 aaKnown RBP22.44■■□□□ 1.18
Ttc39b-202ENSMUST00000048274 Fam71e1A1L3C1 212 aa22.44■■□□□ 1.18
Ttc39b-202ENSMUST00000048274 Mphosph9A6H5Y1 991 aa22.43■■□□□ 1.18
Ttc39b-202ENSMUST00000048274 Grin2aP35436 1464 aa22.43■■□□□ 1.18
Ttc39b-202ENSMUST00000048274 Kif21bQ9QXL1 1668 aa22.43■■□□□ 1.18
Ttc39b-202ENSMUST00000048274 WizO88286 1684 aaKnown RBP22.41■■□□□ 1.18
Ttc39b-202ENSMUST00000048274 Sin3aQ60520 1274 aaKnown RBP22.38■■□□□ 1.17
Ttc39b-202ENSMUST00000048274 Calr4Q3TQS0 420 aa22.37■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms