RNA–Protein interactions for RNA: ENSMUST00000047615.14

Smarcal1-201, Transcript of SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smarcal1, Length 3,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1-201ENSMUST00000047615 Dnajc5P60904 198 aa12.03□□□□□ -0.48
Smarcal1-201ENSMUST00000047615 Map3k1P53349 1493 aa12.02□□□□□ -0.48
Smarcal1-201ENSMUST00000047615 UbtfP25976 765 aaKnown RBP12.01□□□□□ -0.49
Smarcal1-201ENSMUST00000047615 Dnmt1P13864 1620 aaKnown RBP12□□□□□ -0.49
Smarcal1-201ENSMUST00000047615 Kiaa1210E9Q0C6 1637 aa12□□□□□ -0.49
Smarcal1-201ENSMUST00000047615 Arhgef12Q8R4H2 1543 aaKnown RBP12□□□□□ -0.49
Smarcal1-201ENSMUST00000047615 Myt1lP97500 1187 aa11.99□□□□□ -0.49
Smarcal1-201ENSMUST00000047615 Abca5Q8K448 1642 aa11.96□□□□□ -0.49
Smarcal1-201ENSMUST00000047615 Polr1aO35134 1717 aaKnown RBP11.95□□□□□ -0.5
Smarcal1-201ENSMUST00000047615 Chd1P40201 1711 aa11.95□□□□□ -0.5
Smarcal1-201ENSMUST00000047615 Grin2aP35436 1464 aa11.93□□□□□ -0.5
Smarcal1-201ENSMUST00000047615 Abca16E9PWJ7 1678 aa11.93□□□□□ -0.5
Smarcal1-201ENSMUST00000047615 Neo1P97798 1493 aa11.92□□□□□ -0.5
Smarcal1-201ENSMUST00000047615 Sall2Q9QX96 1004 aa11.92□□□□□ -0.5
Smarcal1-201ENSMUST00000047615 Pla2r1Q62028 1487 aa11.91□□□□□ -0.5
Smarcal1-201ENSMUST00000047615 Rapgef2Q8CHG7 1496 aa11.91□□□□□ -0.5
Smarcal1-201ENSMUST00000047615 Rrbp1Q99PL5 1605 aaKnown RBP11.91□□□□□ -0.5
Smarcal1-201ENSMUST00000047615 Neurod1Q60867 357 aa11.91□□□□□ -0.5
Smarcal1-201ENSMUST00000047615 Npm2Q80W85 207 aa11.9□□□□□ -0.5
Smarcal1-201ENSMUST00000047615 Npm1Q61937 292 aaKnown RBP11.9□□□□□ -0.51
Smarcal1-201ENSMUST00000047615 Rpap1Q80TE0 1409 aa11.88□□□□□ -0.51
Smarcal1-201ENSMUST00000047615 Abcc2Q8VI47 1543 aa11.88□□□□□ -0.51
Smarcal1-201ENSMUST00000047615 Setbp1Q9Z180 1582 aa11.87□□□□□ -0.51
Smarcal1-201ENSMUST00000047615 TchhA0A0B4J1F9 1599 aa11.87□□□□□ -0.51
Smarcal1-201ENSMUST00000047615 Cep162Q6ZQ06 1403 aa11.86□□□□□ -0.51
Smarcal1-201ENSMUST00000047615 Mroh2bQ7M6Y6 1581 aa11.86□□□□□ -0.51
Smarcal1-201ENSMUST00000047615 Wdr7Q920I9 1489 aa11.85□□□□□ -0.51
Smarcal1-201ENSMUST00000047615 Cep170Q6A065 1588 aa11.82□□□□□ -0.52
Smarcal1-201ENSMUST00000047615 Fgd6Q69ZL1 1399 aa11.82□□□□□ -0.52
Smarcal1-201ENSMUST00000047615 Arhgef5E9Q7D5 1581 aa11.81□□□□□ -0.52
Smarcal1-201ENSMUST00000047615 Slx4Q6P1D7 1565 aa11.81□□□□□ -0.52
Smarcal1-201ENSMUST00000047615 Wdr66E9Q743 1299 aa11.8□□□□□ -0.52
Smarcal1-201ENSMUST00000047615 Las1lA2BE28 776 aaKnown RBP11.79□□□□□ -0.52
Smarcal1-201ENSMUST00000047615 Plekhg3Q4VAC9 1341 aa11.79□□□□□ -0.52
Smarcal1-201ENSMUST00000047615 Aebp2Q9Z248 504 aaKnown RBP11.78□□□□□ -0.52
Smarcal1-201ENSMUST00000047615 Erich3F6QRE9 1637 aa11.78□□□□□ -0.52
Smarcal1-201ENSMUST00000047615 CadpsQ80TJ1 1355 aa11.77□□□□□ -0.52
Smarcal1-201ENSMUST00000047615 Pprc1Q6NZN1 1644 aa11.76□□□□□ -0.53
Smarcal1-201ENSMUST00000047615 Clip1Q922J3 1391 aa11.76□□□□□ -0.53
Smarcal1-201ENSMUST00000047615 BC005561E9Q5E2 1589 aa11.76□□□□□ -0.53
Smarcal1-201ENSMUST00000047615 Kiaa0556Q8C753 1610 aa11.75□□□□□ -0.53
Smarcal1-201ENSMUST00000047615 Clasp1Q80TV8 1535 aaKnown RBP11.75□□□□□ -0.53
Smarcal1-201ENSMUST00000047615 Soga1E1U8D0 1418 aa11.75□□□□□ -0.53
Smarcal1-201ENSMUST00000047615 Abcc1O35379 1528 aa11.74□□□□□ -0.53
Smarcal1-201ENSMUST00000047615 Ppargc1bQ8VHJ7 1014 aa11.74□□□□□ -0.53
Smarcal1-201ENSMUST00000047615 Adgrl3Q80TS3 1537 aa11.74□□□□□ -0.53
Smarcal1-201ENSMUST00000047615 Il27Q8K3I6 234 aa11.73□□□□□ -0.53
Smarcal1-201ENSMUST00000047615 AdgbG3UZ78 1657 aa11.71□□□□□ -0.53
Smarcal1-201ENSMUST00000047615 WizO88286 1684 aaKnown RBP11.71□□□□□ -0.53
Smarcal1-201ENSMUST00000047615 NhsB1AV60 1647 aa11.71□□□□□ -0.54
Smarcal1-201ENSMUST00000047615 Kdm5bQ80Y84 1544 aa11.71□□□□□ -0.54
Smarcal1-201ENSMUST00000047615 AI481877A2ALV5 1481 aa11.7□□□□□ -0.54
Smarcal1-201ENSMUST00000047615 Cul7Q8VE73 1689 aa11.69□□□□□ -0.54
Smarcal1-201ENSMUST00000047615 Carmil1Q6EDY6 1374 aa11.69□□□□□ -0.54
Smarcal1-201ENSMUST00000047615 PtprkP35822 1457 aa11.68□□□□□ -0.54
Smarcal1-201ENSMUST00000047615 Gapvd1Q6PAR5 1458 aa11.68□□□□□ -0.54
Smarcal1-201ENSMUST00000047615 Pabpn1Q8CCS6 302 aaKnown RBP11.68□□□□□ -0.54
Smarcal1-201ENSMUST00000047615 Peg3Q3URU2 1571 aa11.68□□□□□ -0.54
Smarcal1-201ENSMUST00000047615 Ap3b1Q9Z1T1 1105 aa11.67□□□□□ -0.54
Smarcal1-201ENSMUST00000047615 Ttc37F8VPK0 1563 aa11.67□□□□□ -0.54
Smarcal1-201ENSMUST00000047615 Arhgef11Q68FM7 1552 aa11.66□□□□□ -0.54
Smarcal1-201ENSMUST00000047615 TonslQ6NZL6 1363 aa11.66□□□□□ -0.54
Smarcal1-201ENSMUST00000047615 PtprtQ99M80 1454 aa11.64□□□□□ -0.55
Smarcal1-201ENSMUST00000047615 AglF8VPN4 1532 aa11.64□□□□□ -0.55
Smarcal1-201ENSMUST00000047615 Arhgap35Q91YM2 1499 aa11.64□□□□□ -0.55
Smarcal1-201ENSMUST00000047615 Gcc2Q8CHG3 1679 aa11.64□□□□□ -0.55
Smarcal1-201ENSMUST00000047615 ClspnQ80YR7 1315 aa11.63□□□□□ -0.55
Smarcal1-201ENSMUST00000047615 Lmo7E9PYF4 1699 aaKnown RBP11.62□□□□□ -0.55
Smarcal1-201ENSMUST00000047615 Rad54l2Q99NG0 1466 aa11.61□□□□□ -0.55
Smarcal1-201ENSMUST00000047615 BlmO88700 1416 aa11.61□□□□□ -0.55
Smarcal1-201ENSMUST00000047615 Anks4bQ8K3X6 423 aa11.59□□□□□ -0.55
Smarcal1-201ENSMUST00000047615 Ncapd3Q6ZQK0 1506 aa11.59□□□□□ -0.55
Smarcal1-201ENSMUST00000047615 Abca8bQ8K440 1620 aa11.59□□□□□ -0.55
Smarcal1-201ENSMUST00000047615 Igf1rQ60751 1373 aa11.58□□□□□ -0.56
Smarcal1-201ENSMUST00000047615 Nop58Q6DFW4 536 aaKnown RBP11.58□□□□□ -0.56
Smarcal1-201ENSMUST00000047615 Mapkbp1Q6NS57 1503 aa11.58□□□□□ -0.56
Smarcal1-201ENSMUST00000047615 Cdk11bP24788 784 aaKnown RBP11.57□□□□□ -0.56
Smarcal1-201ENSMUST00000047615 Eea1Q8BL66 1411 aa11.57□□□□□ -0.56
Smarcal1-201ENSMUST00000047615 Fyco1Q8VDC1 1437 aa11.56□□□□□ -0.56
Smarcal1-201ENSMUST00000047615 Ak9G3UYQ4 1894 aa11.56□□□□□ -0.56
Smarcal1-201ENSMUST00000047615 Setd5Q5XJV7 1441 aa11.56□□□□□ -0.56
Smarcal1-201ENSMUST00000047615 Eid3Q3V124 375 aa11.56□□□□□ -0.56
Smarcal1-201ENSMUST00000047615 PxdnQ3UQ28 1475 aa11.56□□□□□ -0.56
Smarcal1-201ENSMUST00000047615 Pdcd11Q6NS46 1862 aaKnown RBP11.55□□□□□ -0.56
Smarcal1-201ENSMUST00000047615 Gm7298A0A0N4SVU1 1476 aa11.55□□□□□ -0.56
Smarcal1-201ENSMUST00000047615 Arap1Q4LDD4 1452 aa11.55□□□□□ -0.56
Smarcal1-201ENSMUST00000047615 Gm14025A2AP89 1413 aa11.54□□□□□ -0.56
Smarcal1-201ENSMUST00000047615 Ankrd26Q811D2 1581 aa11.53□□□□□ -0.56
Smarcal1-201ENSMUST00000047615 Csrnp3P59055 597 aa11.53□□□□□ -0.56
Smarcal1-201ENSMUST00000047615 Fam208aQ69ZR9 1610 aaKnown RBP11.52□□□□□ -0.57
Smarcal1-201ENSMUST00000047615 Neurl4Q5NCX5 1563 aa11.52□□□□□ -0.57
Smarcal1-201ENSMUST00000047615 Rnf17Q99MV7 1640 aa11.51□□□□□ -0.57
Smarcal1-201ENSMUST00000047615 Rapgef6Q5NCJ1 1609 aa11.5□□□□□ -0.57
Smarcal1-201ENSMUST00000047615 Zfyve16Q80U44 1528 aa11.48□□□□□ -0.57
Smarcal1-201ENSMUST00000047615 Ythdc2B2RR83 1445 aaKnown RBP11.47□□□□□ -0.57
Smarcal1-201ENSMUST00000047615 Lrrc9Q8CDN9 1456 aa11.47□□□□□ -0.57
Smarcal1-201ENSMUST00000047615 Kiaa1551Q5DTW7 1521 aa11.46□□□□□ -0.57
Smarcal1-201ENSMUST00000047615 Ncoa2Q61026 1462 aa11.46□□□□□ -0.57
Smarcal1-201ENSMUST00000047615 1700123L14RikQ3V2K7 440 aa11.45□□□□□ -0.58
Smarcal1-201ENSMUST00000047615 Cux1P53564 1515 aa11.44□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms