RNA–Protein interactions for RNA: ENSMUST00000047349.7

Usp28-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Usp28, Length 4,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28-201ENSMUST00000047349 BlmO88700 1416 aa13.59□□□□□ -0.23
Usp28-201ENSMUST00000047349 Neurod1Q60867 357 aa13.58□□□□□ -0.23
Usp28-201ENSMUST00000047349 PogzQ8BZH4 1409 aaKnown RBP13.58□□□□□ -0.24
Usp28-201ENSMUST00000047349 CntlnA2AM05 1397 aa13.57□□□□□ -0.24
Usp28-201ENSMUST00000047349 Naip1Q9QWK5 1403 aa13.57□□□□□ -0.24
Usp28-201ENSMUST00000047349 Aebp2Q9Z248 504 aaKnown RBP13.56□□□□□ -0.24
Usp28-201ENSMUST00000047349 TchhA0A0B4J1F9 1599 aa13.55□□□□□ -0.24
Usp28-201ENSMUST00000047349 Duox2A2AQ99 1517 aa13.55□□□□□ -0.24
Usp28-201ENSMUST00000047349 Pcf11G3X9Z4 1553 aa13.54□□□□□ -0.24
Usp28-201ENSMUST00000047349 Polr1aO35134 1717 aaKnown RBP13.53□□□□□ -0.24
Usp28-201ENSMUST00000047349 Rpap1Q80TE0 1409 aa13.52□□□□□ -0.24
Usp28-201ENSMUST00000047349 Fyco1Q8VDC1 1437 aa13.52□□□□□ -0.25
Usp28-201ENSMUST00000047349 Lmo7E9PYF4 1699 aaKnown RBP13.5□□□□□ -0.25
Usp28-201ENSMUST00000047349 Peg3Q3URU2 1571 aa13.49□□□□□ -0.25
Usp28-201ENSMUST00000047349 SynmQ70IV5 1561 aa13.49□□□□□ -0.25
Usp28-201ENSMUST00000047349 Cdk11bP24788 784 aaKnown RBP13.49□□□□□ -0.25
Usp28-201ENSMUST00000047349 Slx4Q6P1D7 1565 aa13.47□□□□□ -0.25
Usp28-201ENSMUST00000047349 Kdm5bQ80Y84 1544 aa13.47□□□□□ -0.25
Usp28-201ENSMUST00000047349 Ccer2J3QPU5 274 aa13.47□□□□□ -0.25
Usp28-201ENSMUST00000047349 Nop58Q6DFW4 536 aaKnown RBP13.47□□□□□ -0.25
Usp28-201ENSMUST00000047349 Cux1P53564 1515 aa13.47□□□□□ -0.25
Usp28-201ENSMUST00000047349 Anks4bQ8K3X6 423 aa13.46□□□□□ -0.25
Usp28-201ENSMUST00000047349 Dhx29Q6PGC1 1365 aaKnown RBP13.46□□□□□ -0.25
Usp28-201ENSMUST00000047349 Urb2E9Q7L1 1524 aaKnown RBP13.46□□□□□ -0.26
Usp28-201ENSMUST00000047349 Mia2Q91ZV0 1396 aa13.45□□□□□ -0.26
Usp28-201ENSMUST00000047349 Fam50aQ9WV03 339 aaKnown RBP13.42□□□□□ -0.26
Usp28-201ENSMUST00000047349 Lmod2Q3UHZ5 550 aa13.41□□□□□ -0.26
Usp28-201ENSMUST00000047349 Samd9lQ69Z37 1561 aa13.41□□□□□ -0.26
Usp28-201ENSMUST00000047349 Aebp1Q640N1 1128 aa13.4□□□□□ -0.26
Usp28-201ENSMUST00000047349 Crocc2F6XLV1 1638 aa13.39□□□□□ -0.27
Usp28-201ENSMUST00000047349 Fhad1A6PWD2 1420 aa13.39□□□□□ -0.27
Usp28-201ENSMUST00000047349 Eid3Q3V124 375 aa13.37□□□□□ -0.27
Usp28-201ENSMUST00000047349 Ankrd36D3Z4K0 1415 aa13.36□□□□□ -0.27
Usp28-201ENSMUST00000047349 Mrc2Q64449 1479 aa13.35□□□□□ -0.27
Usp28-201ENSMUST00000047349 Vps8Q0P5W1 1427 aa13.35□□□□□ -0.27
Usp28-201ENSMUST00000047349 Rad54l2Q99NG0 1466 aa13.34□□□□□ -0.27
Usp28-201ENSMUST00000047349 EprsQ8CGC7 1512 aaKnown RBP13.32□□□□□ -0.28
Usp28-201ENSMUST00000047349 Gm1043A0A140LJC2 1431 aa13.32□□□□□ -0.28
Usp28-201ENSMUST00000047349 3425401B19RikD3Z1D3 1412 aa13.31□□□□□ -0.28
Usp28-201ENSMUST00000047349 Kif21aQ9QXL2 1672 aa13.3□□□□□ -0.28
Usp28-201ENSMUST00000047349 Ppargc1bQ8VHJ7 1014 aa13.29□□□□□ -0.28
Usp28-201ENSMUST00000047349 UacaQ8CGB3 1411 aa13.29□□□□□ -0.28
Usp28-201ENSMUST00000047349 Gm7298A0A0N4SVU1 1476 aa13.29□□□□□ -0.28
Usp28-201ENSMUST00000047349 Pla2r1Q62028 1487 aa13.28□□□□□ -0.28
Usp28-201ENSMUST00000047349 NclP09405 707 aaKnown RBP13.28□□□□□ -0.28
Usp28-201ENSMUST00000047349 Naip2Q9QUK4 1447 aa13.27□□□□□ -0.28
Usp28-201ENSMUST00000047349 Abca5Q8K448 1642 aa13.27□□□□□ -0.29
Usp28-201ENSMUST00000047349 Kif27Q7M6Z4 1394 aa13.27□□□□□ -0.29
Usp28-201ENSMUST00000047349 CadpsQ80TJ1 1355 aa13.26□□□□□ -0.29
Usp28-201ENSMUST00000047349 Lmtk2Q3TYD6 1471 aa13.24□□□□□ -0.29
Usp28-201ENSMUST00000047349 Ccnb3Q810T2 1396 aa13.24□□□□□ -0.29
Usp28-201ENSMUST00000047349 Ube2uB1AUC4 352 aa13.24□□□□□ -0.29
Usp28-201ENSMUST00000047349 Grin2aP35436 1464 aa13.24□□□□□ -0.29
Usp28-201ENSMUST00000047349 Magi3Q9EQJ9 1476 aa13.23□□□□□ -0.29
Usp28-201ENSMUST00000047349 Gpatch8A2A6A1 1505 aa13.22□□□□□ -0.29
Usp28-201ENSMUST00000047349 Stra8P70278 393 aa13.21□□□□□ -0.29
Usp28-201ENSMUST00000047349 A2mQ6GQT1 1474 aa13.21□□□□□ -0.29
Usp28-201ENSMUST00000047349 Soga1E1U8D0 1418 aa13.2□□□□□ -0.3
Usp28-201ENSMUST00000047349 Plb1Q3TTY0 1478 aa13.2□□□□□ -0.3
Usp28-201ENSMUST00000047349 Adamts12Q811B3 1600 aa13.19□□□□□ -0.3
Usp28-201ENSMUST00000047349 Gm13697A2AK42 830 aa13.19□□□□□ -0.3
Usp28-201ENSMUST00000047349 Camsap2Q8C1B1 1461 aa13.19□□□□□ -0.3
Usp28-201ENSMUST00000047349 Gcc2Q8CHG3 1679 aa13.19□□□□□ -0.3
Usp28-201ENSMUST00000047349 Pbrm1Q8BSQ9 1634 aaKnown RBP13.18□□□□□ -0.3
Usp28-201ENSMUST00000047349 Ift140E9PY46 1464 aa13.18□□□□□ -0.3
Usp28-201ENSMUST00000047349 Tnnt3Q9QZ47 272 aa13.17□□□□□ -0.3
Usp28-201ENSMUST00000047349 Disp1Q3TDN0 1521 aa13.17□□□□□ -0.3
Usp28-201ENSMUST00000047349 WizO88286 1684 aaKnown RBP13.16□□□□□ -0.3
Usp28-201ENSMUST00000047349 Rfx7F8VPJ6 1459 aa13.15□□□□□ -0.3
Usp28-201ENSMUST00000047349 NexmifQ5DTT1 1515 aa13.15□□□□□ -0.3
Usp28-201ENSMUST00000047349 Fhod3Q76LL6 1578 aa13.15□□□□□ -0.3
Usp28-201ENSMUST00000047349 Hspa5P20029 655 aaKnown RBP13.15□□□□□ -0.3
Usp28-201ENSMUST00000047349 Csrnp3P59055 597 aa13.12□□□□□ -0.31
Usp28-201ENSMUST00000047349 Chic2Q9D9G3 165 aa13.12□□□□□ -0.31
Usp28-201ENSMUST00000047349 Aplp2Q06335 707 aa13.11□□□□□ -0.31
Usp28-201ENSMUST00000047349 BC005561E9Q5E2 1589 aa13.11□□□□□ -0.31
Usp28-201ENSMUST00000047349 Cul7Q8VE73 1689 aa13.11□□□□□ -0.31
Usp28-201ENSMUST00000047349 WrnO09053 1401 aa13.09□□□□□ -0.31
Usp28-201ENSMUST00000047349 Nup160Q9Z0W3 1402 aaKnown RBP13.09□□□□□ -0.31
Usp28-201ENSMUST00000047349 Plekhh2Q8C115 1491 aa13.09□□□□□ -0.31
Usp28-201ENSMUST00000047349 Mug1P28665 1476 aa13.08□□□□□ -0.32
Usp28-201ENSMUST00000047349 Rapgef6Q5NCJ1 1609 aa13.07□□□□□ -0.32
Usp28-201ENSMUST00000047349 PxdnQ3UQ28 1475 aa13.07□□□□□ -0.32
Usp28-201ENSMUST00000047349 Cc2d2bA0A286YDU8 1405 aa13.07□□□□□ -0.32
Usp28-201ENSMUST00000047349 Dhx57Q6P5D3 1388 aaKnown RBP13.07□□□□□ -0.32
Usp28-201ENSMUST00000047349 Abca16E9PWJ7 1678 aa13.06□□□□□ -0.32
Usp28-201ENSMUST00000047349 Ncoa2Q61026 1462 aa13.06□□□□□ -0.32
Usp28-201ENSMUST00000047349 Naip5Q9R016 1403 aa13.06□□□□□ -0.32
Usp28-201ENSMUST00000047349 Mphosph9A6H5Y1 991 aa13.06□□□□□ -0.32
Usp28-201ENSMUST00000047349 Mtus2Q3UHD3 1353 aa13.05□□□□□ -0.32
Usp28-201ENSMUST00000047349 CenpbP27790 599 aa13.04□□□□□ -0.32
Usp28-201ENSMUST00000047349 Dennd4bQ3U1Y4 1499 aa13.04□□□□□ -0.32
Usp28-201ENSMUST00000047349 Arhgap27A2AB59 869 aa13.04□□□□□ -0.32
Usp28-201ENSMUST00000047349 1700123L14RikQ3V2K7 440 aa13.03□□□□□ -0.32
Usp28-201ENSMUST00000047349 Cabp1Q9JLK7 227 aa13.02□□□□□ -0.33
Usp28-201ENSMUST00000047349 Abcc5Q9R1X5 1436 aa13.01□□□□□ -0.33
Usp28-201ENSMUST00000047349 Ncoa3O09000 1398 aa13□□□□□ -0.33
Usp28-201ENSMUST00000047349 Il16O54824 1322 aa13□□□□□ -0.33
Usp28-201ENSMUST00000047349 Setbp1Q9Z180 1582 aa13□□□□□ -0.33
Usp28-201ENSMUST00000047349 Shroom2A2ALU4 1481 aa12.99□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 80.3 ms