RNA–Protein interactions for RNA: ENSMUST00000039559.8

Thbs1-201, Transcript of Thrombospondin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Thbs1, Length 5,848 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1-201ENSMUST00000039559 Setd5Q5XJV7 1441 aa12.36□□□□□ -0.43
Thbs1-201ENSMUST00000039559 Rangap1P46061 589 aaKnown RBP12.35□□□□□ -0.43
Thbs1-201ENSMUST00000039559 DekQ7TNV0 380 aaKnown RBP12.31□□□□□ -0.44
Thbs1-201ENSMUST00000039559 CatipB9EKE5 520 aa12.3□□□□□ -0.44
Thbs1-201ENSMUST00000039559 Golga3P55937 1487 aa12.29□□□□□ -0.44
Thbs1-201ENSMUST00000039559 Aebp2Q9Z248 504 aaKnown RBP12.28□□□□□ -0.44
Thbs1-201ENSMUST00000039559 NacadQ5SWP3 1504 aa12.28□□□□□ -0.44
Thbs1-201ENSMUST00000039559 Hsp90ab1P11499 724 aaKnown RBP12.28□□□□□ -0.44
Thbs1-201ENSMUST00000039559 Fgd1P52734 960 aa12.28□□□□□ -0.44
Thbs1-201ENSMUST00000039559 Baz1aO88379 1555 aa12.27□□□□□ -0.44
Thbs1-201ENSMUST00000039559 CanxP35564 591 aaKnown RBP12.27□□□□□ -0.45
Thbs1-201ENSMUST00000039559 1700123L14RikQ3V2K7 440 aa12.26□□□□□ -0.45
Thbs1-201ENSMUST00000039559 Ofd1Q80Z25 1017 aa12.26□□□□□ -0.45
Thbs1-201ENSMUST00000039559 Rgl3Q3UYI5 709 aa12.25□□□□□ -0.45
Thbs1-201ENSMUST00000039559 Fam71e1A1L3C1 212 aa12.25□□□□□ -0.45
Thbs1-201ENSMUST00000039559 Trim44Q9QXA7 346 aa12.24□□□□□ -0.45
Thbs1-201ENSMUST00000039559 Eea1Q8BL66 1411 aa12.23□□□□□ -0.45
Thbs1-201ENSMUST00000039559 Trim30dE9PWL0 497 aa12.22□□□□□ -0.45
Thbs1-201ENSMUST00000039559 Trim26Q99PN3 545 aa12.22□□□□□ -0.45
Thbs1-201ENSMUST00000039559 Vsig10D3YX43 558 aa12.21□□□□□ -0.45
Thbs1-201ENSMUST00000039559 Rsf1E9PWW9 1441 aaKnown RBP12.19□□□□□ -0.46
Thbs1-201ENSMUST00000039559 Cwc22Q8C5N3 908 aaKnown RBP12.19□□□□□ -0.46
Thbs1-201ENSMUST00000039559 Ccdc27Q3V036 639 aa12.17□□□□□ -0.46
Thbs1-201ENSMUST00000039559 Lmod3E9QA62 571 aa12.17□□□□□ -0.46
Thbs1-201ENSMUST00000039559 Card11Q8CIS0 1159 aa12.17□□□□□ -0.46
Thbs1-201ENSMUST00000039559 P3h3Q8CG70 732 aa12.16□□□□□ -0.46
Thbs1-201ENSMUST00000039559 Kif15Q6P9L6 1387 aa12.16□□□□□ -0.46
Thbs1-201ENSMUST00000039559 Htatsf1Q8BGC0 757 aa12.16□□□□□ -0.46
Thbs1-201ENSMUST00000039559 Ythdc1E9Q5K9 736 aaKnown RBP12.15□□□□□ -0.46
Thbs1-201ENSMUST00000039559 Ccdc18Q640L5 1455 aa12.15□□□□□ -0.46
Thbs1-201ENSMUST00000039559 Plppr3Q7TPB0 716 aa12.15□□□□□ -0.47
Thbs1-201ENSMUST00000039559 PtmaP26350 111 aa12.14□□□□□ -0.47
Thbs1-201ENSMUST00000039559 IqubQ8CDK3 788 aa12.14□□□□□ -0.47
Thbs1-201ENSMUST00000039559 Mia2Q91ZV0 1396 aa12.13□□□□□ -0.47
Thbs1-201ENSMUST00000039559 Ppm1gQ61074 542 aa12.12□□□□□ -0.47
Thbs1-201ENSMUST00000039559 Grwd1Q810D6 446 aaKnown RBP12.12□□□□□ -0.47
Thbs1-201ENSMUST00000039559 Safb2Q80YR5 991 aaKnown RBP12.11□□□□□ -0.47
Thbs1-201ENSMUST00000039559 Srpk2O54781 681 aaKnown RBP12.11□□□□□ -0.47
Thbs1-201ENSMUST00000039559 Ercc6F8VPZ5 1481 aa12.09□□□□□ -0.47
Thbs1-201ENSMUST00000039559 Plcb2A3KGF7 1181 aa12.09□□□□□ -0.47
Thbs1-201ENSMUST00000039559 Apbb1Q9QXJ1 710 aa12.08□□□□□ -0.47
Thbs1-201ENSMUST00000039559 Kdm2aP59997 1161 aa12.08□□□□□ -0.48
Thbs1-201ENSMUST00000039559 Mroh3A0A1D5RM54 893 aa12.08□□□□□ -0.48
Thbs1-201ENSMUST00000039559 Mtus2Q3UHD3 1353 aa12.08□□□□□ -0.48
Thbs1-201ENSMUST00000039559 Mapk8ip3Q9ESN9 1337 aa12.07□□□□□ -0.48
Thbs1-201ENSMUST00000039559 Arid4bA2CG63 1314 aaKnown RBP12.07□□□□□ -0.48
Thbs1-201ENSMUST00000039559 Gm20521D3Z5F7 333 aa12.06□□□□□ -0.48
Thbs1-201ENSMUST00000039559 Map7O88735 730 aa12.06□□□□□ -0.48
Thbs1-201ENSMUST00000039559 Chmp4bQ9D8B3 224 aaKnown RBP12.06□□□□□ -0.48
Thbs1-201ENSMUST00000039559 Neurod2Q62414 383 aa12.06□□□□□ -0.48
Thbs1-201ENSMUST00000039559 Mbd3Q9Z2D8 285 aaKnown RBP12.05□□□□□ -0.48
Thbs1-201ENSMUST00000039559 Exosc9Q9JHI7 438 aaKnown RBP12.04□□□□□ -0.48
Thbs1-201ENSMUST00000039559 Arhgap27A2AB59 869 aa12.04□□□□□ -0.48
Thbs1-201ENSMUST00000039559 Dbr1Q923B1 550 aa12.01□□□□□ -0.49
Thbs1-201ENSMUST00000039559 NudcO35685 332 aaKnown RBP12□□□□□ -0.49
Thbs1-201ENSMUST00000039559 Irx6Q9ER75 438 aa12□□□□□ -0.49
Thbs1-201ENSMUST00000039559 Rrp7aQ9D1C9 280 aaKnown RBP11.99□□□□□ -0.49
Thbs1-201ENSMUST00000039559 SafbD3YXK2 937 aaKnown RBP11.98□□□□□ -0.49
Thbs1-201ENSMUST00000039559 Stag3O70576 1240 aa11.97□□□□□ -0.49
Thbs1-201ENSMUST00000039559 B4galnt3Q6L8S8 986 aa11.97□□□□□ -0.49
Thbs1-201ENSMUST00000039559 Gm6268A2A3U9 297 aa11.96□□□□□ -0.49
Thbs1-201ENSMUST00000039559 Iqcf3Q9D498 203 aa11.96□□□□□ -0.49
Thbs1-201ENSMUST00000039559 Rwdd1Q9CQK7 243 aa11.96□□□□□ -0.49
Thbs1-201ENSMUST00000039559 Hspa5P20029 655 aaKnown RBP11.96□□□□□ -0.5
Thbs1-201ENSMUST00000039559 Armcx1Q9CX83 456 aa11.96□□□□□ -0.5
Thbs1-201ENSMUST00000039559 KnstrnQ9D9Z1 312 aaKnown RBP11.95□□□□□ -0.5
Thbs1-201ENSMUST00000039559 Adam1bQ8R534 806 aa11.95□□□□□ -0.5
Thbs1-201ENSMUST00000039559 Tcerg1Q8CGF7 1100 aaKnown RBP11.94□□□□□ -0.5
Thbs1-201ENSMUST00000039559 Irx3P81067 507 aa11.94□□□□□ -0.5
Thbs1-201ENSMUST00000039559 Zfp777B9EKF4 885 aa11.94□□□□□ -0.5
Thbs1-201ENSMUST00000039559 Kdm5dQ62240 1548 aa11.94□□□□□ -0.5
Thbs1-201ENSMUST00000039559 Casc1Q6TDU8 730 aa11.94□□□□□ -0.5
Thbs1-201ENSMUST00000039559 Stk24Q99KH8 431 aa11.93□□□□□ -0.5
Thbs1-201ENSMUST00000039559 Fhad1A6PWD2 1420 aa11.92□□□□□ -0.5
Thbs1-201ENSMUST00000039559 Wwc2Q6NXJ0 1187 aa11.92□□□□□ -0.5
Thbs1-201ENSMUST00000039559 Bcl11aQ9QYE3 773 aa11.92□□□□□ -0.5
Thbs1-201ENSMUST00000039559 Cep162Q6ZQ06 1403 aa11.91□□□□□ -0.5
Thbs1-201ENSMUST00000039559 Znf326O88291 580 aa11.91□□□□□ -0.5
Thbs1-201ENSMUST00000039559 Supt16hQ920B9 1047 aa11.9□□□□□ -0.5
Thbs1-201ENSMUST00000039559 Fmn1Q05860 1466 aa11.9□□□□□ -0.51
Thbs1-201ENSMUST00000039559 MccE9PWI3 1003 aa11.89□□□□□ -0.51
Thbs1-201ENSMUST00000039559 Rundc1Q0VDN7 615 aa11.89□□□□□ -0.51
Thbs1-201ENSMUST00000039559 Spryd3E9Q9B3 442 aa11.89□□□□□ -0.51
Thbs1-201ENSMUST00000039559 PnnO35691 725 aaKnown RBP11.89□□□□□ -0.51
Thbs1-201ENSMUST00000039559 Hsp90b1P08113 802 aaKnown RBP11.89□□□□□ -0.51
Thbs1-201ENSMUST00000039559 Slc4a3P16283 1227 aa11.89□□□□□ -0.51
Thbs1-201ENSMUST00000039559 HnrnpuQ8VEK3 800 aaKnown RBP11.88□□□□□ -0.51
Thbs1-201ENSMUST00000039559 Arhgap35Q91YM2 1499 aa11.88□□□□□ -0.51
Thbs1-201ENSMUST00000039559 Pkd2O35245 966 aa11.88□□□□□ -0.51
Thbs1-201ENSMUST00000039559 Kif27Q7M6Z4 1394 aa11.88□□□□□ -0.51
Thbs1-201ENSMUST00000039559 Fyco1Q8VDC1 1437 aa11.87□□□□□ -0.51
Thbs1-201ENSMUST00000039559 Cnga1P29974 684 aa11.87□□□□□ -0.51
Thbs1-201ENSMUST00000039559 Exoc6Q8R313 802 aa11.87□□□□□ -0.51
Thbs1-201ENSMUST00000039559 Ipo9Q91YE6 1041 aa11.87□□□□□ -0.51
Thbs1-201ENSMUST00000039559 Pes1Q9EQ61 584 aaKnown RBP11.87□□□□□ -0.51
Thbs1-201ENSMUST00000039559 EspnQ9ET47 871 aa11.87□□□□□ -0.51
Thbs1-201ENSMUST00000039559 AU015836B2RUM3 263 aa11.86□□□□□ -0.51
Thbs1-201ENSMUST00000039559 Ccdc88bQ4QRL3 1481 aa11.86□□□□□ -0.51
Thbs1-201ENSMUST00000039559 Dnai1Q8C0M8 701 aa11.86□□□□□ -0.51
Thbs1-201ENSMUST00000039559 Map4P27546 1125 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 59.9 ms