RNA–Protein interactions for RNA: ENSMUST00000038844.6

Ubd-201, Transcript of Ubiquitin D, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubd, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubd-201ENSMUST00000038844 Zbtb7aO88939 569 aaKnown RBP14.34□□□□□ -0.11
Ubd-201ENSMUST00000038844 Crocc2F6XLV1 1638 aa14.3□□□□□ -0.12
Ubd-201ENSMUST00000038844 Pabpn1Q8CCS6 302 aaKnown RBP14.26□□□□□ -0.13
Ubd-201ENSMUST00000038844 Cacnb1Q8R3Z5 597 aa14.26□□□□□ -0.13
Ubd-201ENSMUST00000038844 Duox2A2AQ99 1517 aa14.25□□□□□ -0.13
Ubd-201ENSMUST00000038844 Efcab5A0JP43 1406 aa14.24□□□□□ -0.13
Ubd-201ENSMUST00000038844 Grin2bQ01097 1482 aa14.21□□□□□ -0.13
Ubd-201ENSMUST00000038844 Rusc2Q80U22 1514 aa14.2□□□□□ -0.14
Ubd-201ENSMUST00000038844 Cc2d2bA0A286YDU8 1405 aa14.19□□□□□ -0.14
Ubd-201ENSMUST00000038844 Rnf216P58283 853 aa14.19□□□□□ -0.14
Ubd-201ENSMUST00000038844 G430095P16RikE9Q913 147 aa14.16□□□□□ -0.14
Ubd-201ENSMUST00000038844 Disp1Q3TDN0 1521 aa14.15□□□□□ -0.14
Ubd-201ENSMUST00000038844 Nup160Q9Z0W3 1402 aaKnown RBP14.13□□□□□ -0.15
Ubd-201ENSMUST00000038844 Znf703P0CL69 594 aa14.12□□□□□ -0.15
Ubd-201ENSMUST00000038844 Col17a1Q07563 1470 aa14.12□□□□□ -0.15
Ubd-201ENSMUST00000038844 NrkQ9R0G8 1455 aa14.11□□□□□ -0.15
Ubd-201ENSMUST00000038844 Pbrm1Q8BSQ9 1634 aaKnown RBP14.09□□□□□ -0.15
Ubd-201ENSMUST00000038844 Pelp1Q9DBD5 1123 aaKnown RBP14.08□□□□□ -0.16
Ubd-201ENSMUST00000038844 Zbtb12Q9Z150 459 aa14.07□□□□□ -0.16
Ubd-201ENSMUST00000038844 Zcchc11B2RX14 1644 aaKnown RBP14.05□□□□□ -0.16
Ubd-201ENSMUST00000038844 Ildr2B5TVM2 661 aa14.05□□□□□ -0.16
Ubd-201ENSMUST00000038844 Top2aQ01320 1528 aaKnown RBP14.04□□□□□ -0.16
Ubd-201ENSMUST00000038844 Fgd6Q69ZL1 1399 aa14.03□□□□□ -0.16
Ubd-201ENSMUST00000038844 Samd9lQ69Z37 1561 aa14.02□□□□□ -0.16
Ubd-201ENSMUST00000038844 AqrQ8CFQ3 1481 aaKnown RBP14.01□□□□□ -0.17
Ubd-201ENSMUST00000038844 Abcb7Q61102 752 aaKnown RBP14.01□□□□□ -0.17
Ubd-201ENSMUST00000038844 Kcnn1Q9EQR3 537 aa14□□□□□ -0.17
Ubd-201ENSMUST00000038844 Grin2aP35436 1464 aa13.99□□□□□ -0.17
Ubd-201ENSMUST00000038844 Ccdc88bQ4QRL3 1481 aa13.99□□□□□ -0.17
Ubd-201ENSMUST00000038844 Shroom4Q1W617 1475 aa13.98□□□□□ -0.17
Ubd-201ENSMUST00000038844 Cdca7Q9D0M2 382 aa13.96□□□□□ -0.17
Ubd-201ENSMUST00000038844 Rad54l2Q99NG0 1466 aa13.95□□□□□ -0.18
Ubd-201ENSMUST00000038844 Magi3Q9EQJ9 1476 aa13.94□□□□□ -0.18
Ubd-201ENSMUST00000038844 C1qtnf12Q8R2Z0 308 aa13.94□□□□□ -0.18
Ubd-201ENSMUST00000038844 Prr29B1ARI9 187 aa13.93□□□□□ -0.18
Ubd-201ENSMUST00000038844 Gpatch8A2A6A1 1505 aa13.93□□□□□ -0.18
Ubd-201ENSMUST00000038844 CadpsQ80TJ1 1355 aa13.92□□□□□ -0.18
Ubd-201ENSMUST00000038844 Zeb1Q64318 1117 aa13.91□□□□□ -0.18
Ubd-201ENSMUST00000038844 SynmQ70IV5 1561 aa13.89□□□□□ -0.19
Ubd-201ENSMUST00000038844 PtprkP35822 1457 aa13.89□□□□□ -0.19
Ubd-201ENSMUST00000038844 Pla2r1Q62028 1487 aa13.86□□□□□ -0.19
Ubd-201ENSMUST00000038844 Adgrl3Q80TS3 1537 aa13.85□□□□□ -0.19
Ubd-201ENSMUST00000038844 Gapvd1Q6PAR5 1458 aa13.85□□□□□ -0.19
Ubd-201ENSMUST00000038844 Gtpbp6Q3U6U5 514 aa13.84□□□□□ -0.19
Ubd-201ENSMUST00000038844 Npm2Q80W85 207 aa13.83□□□□□ -0.2
Ubd-201ENSMUST00000038844 AknaQ80VW7 1404 aa13.82□□□□□ -0.2
Ubd-201ENSMUST00000038844 Gm156Q58A37 223 aa13.82□□□□□ -0.2
Ubd-201ENSMUST00000038844 Nkx1-1G3UXB3 402 aa13.8□□□□□ -0.2
Ubd-201ENSMUST00000038844 Mroh2bQ7M6Y6 1581 aa13.79□□□□□ -0.2
Ubd-201ENSMUST00000038844 HrcG5E8J6 738 aa13.79□□□□□ -0.2
Ubd-201ENSMUST00000038844 Abcc1O35379 1528 aa13.79□□□□□ -0.2
Ubd-201ENSMUST00000038844 Soga1E1U8D0 1418 aa13.78□□□□□ -0.2
Ubd-201ENSMUST00000038844 Cep170Q6A065 1588 aa13.78□□□□□ -0.2
Ubd-201ENSMUST00000038844 Carmil1Q6EDY6 1374 aa13.77□□□□□ -0.21
Ubd-201ENSMUST00000038844 Ttbk1Q6PCN3 1308 aa13.77□□□□□ -0.21
Ubd-201ENSMUST00000038844 Ythdc2B2RR83 1445 aaKnown RBP13.76□□□□□ -0.21
Ubd-201ENSMUST00000038844 Arhgef5E9Q7D5 1581 aa13.75□□□□□ -0.21
Ubd-201ENSMUST00000038844 Arhgap27A2AB59 869 aa13.75□□□□□ -0.21
Ubd-201ENSMUST00000038844 Gm14025A2AP89 1413 aa13.74□□□□□ -0.21
Ubd-201ENSMUST00000038844 TchhA0A0B4J1F9 1599 aa13.74□□□□□ -0.21
Ubd-201ENSMUST00000038844 EprsQ8CGC7 1512 aaKnown RBP13.74□□□□□ -0.21
Ubd-201ENSMUST00000038844 Setd1bQ8CFT2 1985 aa13.73□□□□□ -0.21
Ubd-201ENSMUST00000038844 Map3k1P53349 1493 aa13.73□□□□□ -0.21
Ubd-201ENSMUST00000038844 PtprtQ99M80 1454 aa13.73□□□□□ -0.21
Ubd-201ENSMUST00000038844 Neo1P97798 1493 aa13.72□□□□□ -0.21
Ubd-201ENSMUST00000038844 Rpap1Q80TE0 1409 aa13.72□□□□□ -0.21
Ubd-201ENSMUST00000038844 Adamts12Q811B3 1600 aa13.7□□□□□ -0.22
Ubd-201ENSMUST00000038844 Map3k4O08648 1597 aa13.7□□□□□ -0.22
Ubd-201ENSMUST00000038844 Dnmt1P13864 1620 aaKnown RBP13.68□□□□□ -0.22
Ubd-201ENSMUST00000038844 Clcn6O35454 870 aa13.68□□□□□ -0.22
Ubd-201ENSMUST00000038844 Rapgef2Q8CHG7 1496 aa13.67□□□□□ -0.22
Ubd-201ENSMUST00000038844 Polr1aO35134 1717 aaKnown RBP13.65□□□□□ -0.22
Ubd-201ENSMUST00000038844 PxdnQ3UQ28 1475 aa13.65□□□□□ -0.22
Ubd-201ENSMUST00000038844 Abcc2Q8VI47 1543 aa13.64□□□□□ -0.23
Ubd-201ENSMUST00000038844 Jph4Q80WT0 628 aa13.64□□□□□ -0.23
Ubd-201ENSMUST00000038844 AI481877A2ALV5 1481 aa13.63□□□□□ -0.23
Ubd-201ENSMUST00000038844 Gm7298A0A0N4SVU1 1476 aa13.62□□□□□ -0.23
Ubd-201ENSMUST00000038844 Igf1rQ60751 1373 aa13.62□□□□□ -0.23
Ubd-201ENSMUST00000038844 Clip1Q922J3 1391 aa13.62□□□□□ -0.23
Ubd-201ENSMUST00000038844 Arhgap35Q91YM2 1499 aa13.61□□□□□ -0.23
Ubd-201ENSMUST00000038844 WizO88286 1684 aaKnown RBP13.6□□□□□ -0.23
Ubd-201ENSMUST00000038844 Slx4Q6P1D7 1565 aa13.6□□□□□ -0.23
Ubd-201ENSMUST00000038844 Abca16E9PWJ7 1678 aa13.59□□□□□ -0.23
Ubd-201ENSMUST00000038844 Arhgef12Q8R4H2 1543 aaKnown RBP13.59□□□□□ -0.23
Ubd-201ENSMUST00000038844 Setbp1Q9Z180 1582 aa13.58□□□□□ -0.23
Ubd-201ENSMUST00000038844 Fyco1Q8VDC1 1437 aa13.56□□□□□ -0.24
Ubd-201ENSMUST00000038844 Pcdh10E9PXQ7 1057 aa13.56□□□□□ -0.24
Ubd-201ENSMUST00000038844 BC005561E9Q5E2 1589 aa13.55□□□□□ -0.24
Ubd-201ENSMUST00000038844 Ppp1r18Q8BQ30 594 aa13.55□□□□□ -0.24
Ubd-201ENSMUST00000038844 Chd1P40201 1711 aa13.55□□□□□ -0.24
Ubd-201ENSMUST00000038844 Pprc1Q6NZN1 1644 aa13.54□□□□□ -0.24
Ubd-201ENSMUST00000038844 Cep162Q6ZQ06 1403 aa13.54□□□□□ -0.24
Ubd-201ENSMUST00000038844 WrnO09053 1401 aa13.53□□□□□ -0.24
Ubd-201ENSMUST00000038844 Eif4g1Q6NZJ6 1600 aaKnown RBP13.52□□□□□ -0.25
Ubd-201ENSMUST00000038844 Abca5Q8K448 1642 aa13.51□□□□□ -0.25
Ubd-201ENSMUST00000038844 Kdm5bQ80Y84 1544 aa13.49□□□□□ -0.25
Ubd-201ENSMUST00000038844 Rrbp1Q99PL5 1605 aaKnown RBP13.49□□□□□ -0.25
Ubd-201ENSMUST00000038844 Pip4p2Q9CZX7 257 aa13.48□□□□□ -0.25
Ubd-201ENSMUST00000038844 Clasp1Q80TV8 1535 aaKnown RBP13.47□□□□□ -0.25
Ubd-201ENSMUST00000038844 Ms4a5Q810P8 197 aa13.46□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 57 ms