RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Synj1Q8CHC4 1574 aa15.57■□□□□ 0.08
Topbp1-201ENSMUST00000035164 Zbtb4Q5F293 982 aa15.55■□□□□ 0.08
Topbp1-201ENSMUST00000035164 CftrP26361 1476 aa15.54■□□□□ 0.08
Topbp1-201ENSMUST00000035164 Eea1Q8BL66 1411 aa15.53■□□□□ 0.08
Topbp1-201ENSMUST00000035164 Crybg2B7ZCC2 1516 aa15.53■□□□□ 0.08
Topbp1-201ENSMUST00000035164 DaxxO35613 739 aa15.53■□□□□ 0.08
Topbp1-201ENSMUST00000035164 Wwc2Q6NXJ0 1187 aa15.52■□□□□ 0.07
Topbp1-201ENSMUST00000035164 NeflP08551 543 aa15.45■□□□□ 0.06
Topbp1-201ENSMUST00000035164 Sycp2Q9CUU3 1500 aa15.45■□□□□ 0.06
Topbp1-201ENSMUST00000035164 Gm13697A2AK42 830 aa15.44■□□□□ 0.06
Topbp1-201ENSMUST00000035164 Ccer2J3QPU5 274 aa15.42■□□□□ 0.06
Topbp1-201ENSMUST00000035164 Zbtb7cQ8VCZ7 619 aa15.42■□□□□ 0.06
Topbp1-201ENSMUST00000035164 Fmn1Q05860 1466 aa15.4■□□□□ 0.06
Topbp1-201ENSMUST00000035164 Pak3Q61036 559 aa15.36■□□□□ 0.05
Topbp1-201ENSMUST00000035164 Baz1bQ9Z277 1479 aa15.36■□□□□ 0.05
Topbp1-201ENSMUST00000035164 Npm1Q61937 292 aaKnown RBP15.36■□□□□ 0.05
Topbp1-201ENSMUST00000035164 Rad21Q61550 635 aaKnown RBP15.35■□□□□ 0.05
Topbp1-201ENSMUST00000035164 Ofd1Q80Z25 1017 aa15.35■□□□□ 0.05
Topbp1-201ENSMUST00000035164 Ncapd3Q6ZQK0 1506 aa15.34■□□□□ 0.05
Topbp1-201ENSMUST00000035164 Ccdc27Q3V036 639 aa15.32■□□□□ 0.04
Topbp1-201ENSMUST00000035164 Exoc6Q8R313 802 aa15.32■□□□□ 0.04
Topbp1-201ENSMUST00000035164 ArxO35085 564 aa15.31■□□□□ 0.04
Topbp1-201ENSMUST00000035164 Rpap1Q80TE0 1409 aa15.3■□□□□ 0.04
Topbp1-201ENSMUST00000035164 Anp32bQ9EST5 272 aaKnown RBP15.29■□□□□ 0.04
Topbp1-201ENSMUST00000035164 Hsp90aa1P07901 733 aaKnown RBP15.26■□□□□ 0.03
Topbp1-201ENSMUST00000035164 Rgl3Q3UYI5 709 aa15.25■□□□□ 0.03
Topbp1-201ENSMUST00000035164 Smg6P61406 1418 aaKnown RBP15.24■□□□□ 0.03
Topbp1-201ENSMUST00000035164 Kif15Q6P9L6 1387 aa15.24■□□□□ 0.03
Topbp1-201ENSMUST00000035164 Upf2A2AT37 1269 aaKnown RBP15.23■□□□□ 0.03
Topbp1-201ENSMUST00000035164 Cc2d2aQ8CFW7 1633 aa15.23■□□□□ 0.03
Topbp1-201ENSMUST00000035164 Hdac5Q9Z2V6 1113 aa15.21■□□□□ 0.02
Topbp1-201ENSMUST00000035164 Ccdc18Q640L5 1455 aa15.2■□□□□ 0.02
Topbp1-201ENSMUST00000035164 Grwd1Q810D6 446 aaKnown RBP15.18■□□□□ 0.02
Topbp1-201ENSMUST00000035164 Prdm10Q3UTQ7 1184 aa15.18■□□□□ 0.02
Topbp1-201ENSMUST00000035164 ChgaP26339 463 aaKnown RBP15.17■□□□□ 0.02
Topbp1-201ENSMUST00000035164 Arap1Q4LDD4 1452 aa15.17■□□□□ 0.02
Topbp1-201ENSMUST00000035164 CanxP35564 591 aaKnown RBP15.17■□□□□ 0.02
Topbp1-201ENSMUST00000035164 Kcnh8P59111 1102 aa15.16■□□□□ 0.02
Topbp1-201ENSMUST00000035164 B4galnt3Q6L8S8 986 aa15.15■□□□□ 0.02
Topbp1-201ENSMUST00000035164 Dbr1Q923B1 550 aa15.15■□□□□ 0.02
Topbp1-201ENSMUST00000035164 Tcerg1Q8CGF7 1100 aaKnown RBP15.14■□□□□ 0.01
Topbp1-201ENSMUST00000035164 Top2aQ01320 1528 aaKnown RBP15.14■□□□□ 0.01
Topbp1-201ENSMUST00000035164 Slc4a2P13808 1237 aaKnown RBP15.14■□□□□ 0.01
Topbp1-201ENSMUST00000035164 Irx3P81067 507 aa15.13■□□□□ 0.01
Topbp1-201ENSMUST00000035164 Mia2Q91ZV0 1396 aa15.13■□□□□ 0.01
Topbp1-201ENSMUST00000035164 Pkd2O35245 966 aa15.1■□□□□ 0.01
Topbp1-201ENSMUST00000035164 Apbb1Q9QXJ1 710 aa15.1■□□□□ 0.01
Topbp1-201ENSMUST00000035164 Washc2Q6PGL7 1334 aa15.1■□□□□ 0.01
Topbp1-201ENSMUST00000035164 Mphosph9A6H5Y1 991 aa15.1■□□□□ 0.01
Topbp1-201ENSMUST00000035164 Aebp1Q640N1 1128 aa15.1■□□□□ 0.01
Topbp1-201ENSMUST00000035164 Ipo9Q91YE6 1041 aa15.1■□□□□ 0.01
Topbp1-201ENSMUST00000035164 PtprkP35822 1457 aa15.09■□□□□ 0.01
Topbp1-201ENSMUST00000035164 Arhgap35Q91YM2 1499 aa15.08■□□□□ 0
Topbp1-201ENSMUST00000035164 Cttnbp2B9EJA2 1648 aa15.07■□□□□ 0
Topbp1-201ENSMUST00000035164 Gtf3c3Q3TMP1 882 aa15.07■□□□□ 0
Topbp1-201ENSMUST00000035164 Gm13695A2AK44 830 aa15.06■□□□□ 0
Topbp1-201ENSMUST00000035164 Os9Q8K2C7 672 aa15.06■□□□□ 0
Topbp1-201ENSMUST00000035164 Top2bQ64511 1612 aa15.05■□□□□ 0
Topbp1-201ENSMUST00000035164 Ubl4bQ9CQ84 188 aa15.05■□□□□ 0
Topbp1-201ENSMUST00000035164 Cabp1Q9JLK7 227 aa15.05■□□□□ 0
Topbp1-201ENSMUST00000035164 Fkbp15Q6P9Q6 1216 aaKnown RBP15.05■□□□□ -0
Topbp1-201ENSMUST00000035164 Naip1Q9QWK5 1403 aa15.03■□□□□ -0
Topbp1-201ENSMUST00000035164 Card11Q8CIS0 1159 aa15.03■□□□□ -0
Topbp1-201ENSMUST00000035164 Plcd4Q8K3R3 807 aa15.03■□□□□ -0
Topbp1-201ENSMUST00000035164 Ccdc9Q8VC31 543 aaKnown RBP15.03■□□□□ -0
Topbp1-201ENSMUST00000035164 Liat1Q810M6 228 aa15.01□□□□□ -0.01
Topbp1-201ENSMUST00000035164 Arhgap27A2AB59 869 aa15.01□□□□□ -0.01
Topbp1-201ENSMUST00000035164 Rundc1Q0VDN7 615 aa15.01□□□□□ -0.01
Topbp1-201ENSMUST00000035164 Polr3glQ8R0C0 218 aa15□□□□□ -0.01
Topbp1-201ENSMUST00000035164 Trim30dE9PWL0 497 aa15□□□□□ -0.01
Topbp1-201ENSMUST00000035164 Fyco1Q8VDC1 1437 aa14.99□□□□□ -0.01
Topbp1-201ENSMUST00000035164 Spryd3E9Q9B3 442 aa14.97□□□□□ -0.01
Topbp1-201ENSMUST00000035164 Rangap1P46061 589 aaKnown RBP14.97□□□□□ -0.01
Topbp1-201ENSMUST00000035164 CntlnA2AM05 1397 aa14.97□□□□□ -0.01
Topbp1-201ENSMUST00000035164 AqrQ8CFQ3 1481 aaKnown RBP14.97□□□□□ -0.01
Topbp1-201ENSMUST00000035164 Zfp644E9QA22 1323 aa14.96□□□□□ -0.01
Topbp1-201ENSMUST00000035164 Arhgef5E9Q7D5 1581 aa14.95□□□□□ -0.02
Topbp1-201ENSMUST00000035164 Smarca4Q3TKT4 1613 aaKnown RBP14.95□□□□□ -0.02
Topbp1-201ENSMUST00000035164 Dhx29Q6PGC1 1365 aaKnown RBP14.94□□□□□ -0.02
Topbp1-201ENSMUST00000035164 Erich6D3Z6S9 713 aa14.94□□□□□ -0.02
Topbp1-201ENSMUST00000035164 4930567H17RikQ3V0K5 233 aa14.94□□□□□ -0.02
Topbp1-201ENSMUST00000035164 Cwc22Q8C5N3 908 aaKnown RBP14.94□□□□□ -0.02
Topbp1-201ENSMUST00000035164 Neurod2Q62414 383 aa14.92□□□□□ -0.02
Topbp1-201ENSMUST00000035164 Usp47Q8BY87 1376 aa14.92□□□□□ -0.02
Topbp1-201ENSMUST00000035164 UacaQ8CGB3 1411 aa14.92□□□□□ -0.02
Topbp1-201ENSMUST00000035164 L3mbtl2P59178 703 aa14.91□□□□□ -0.02
Topbp1-201ENSMUST00000035164 Trak1Q6PD31 939 aa14.9□□□□□ -0.02
Topbp1-201ENSMUST00000035164 Ccnb3Q810T2 1396 aa14.9□□□□□ -0.02
Topbp1-201ENSMUST00000035164 Nlrp6Q91WS2 869 aa14.9□□□□□ -0.02
Topbp1-201ENSMUST00000035164 Chmp5Q9D7S9 219 aa14.9□□□□□ -0.02
Topbp1-201ENSMUST00000035164 Fhad1A6PWD2 1420 aa14.9□□□□□ -0.02
Topbp1-201ENSMUST00000035164 PnisrA2AJT4 805 aaKnown RBP14.88□□□□□ -0.03
Topbp1-201ENSMUST00000035164 Hsp90ab1P11499 724 aaKnown RBP14.88□□□□□ -0.03
Topbp1-201ENSMUST00000035164 Ankrd36D3Z4K0 1415 aa14.87□□□□□ -0.03
Topbp1-201ENSMUST00000035164 Zscan21Q07231 555 aa14.87□□□□□ -0.03
Topbp1-201ENSMUST00000035164 Egfem1Q8C088 590 aa14.87□□□□□ -0.03
Topbp1-201ENSMUST00000035164 Sart3Q9JLI8 962 aaKnown RBP14.87□□□□□ -0.03
Topbp1-201ENSMUST00000035164 Trim26Q99PN3 545 aa14.86□□□□□ -0.03
Topbp1-201ENSMUST00000035164 Armcx1Q9CX83 456 aa14.86□□□□□ -0.03
Topbp1-201ENSMUST00000035164 BicraF8VPZ9 1578 aa14.86□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms