RNA–Protein interactions for RNA: ENSMUST00000035026.4

Trim42-201, Transcript of Tripartite motif-containing protein 42, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim42, Length 2,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42-201ENSMUST00000035026 Rapgef2Q8CHG7 1496 aa13.87□□□□□ -0.19
Trim42-201ENSMUST00000035026 Mroh2bQ7M6Y6 1581 aa13.87□□□□□ -0.19
Trim42-201ENSMUST00000035026 Ttbk1Q6PCN3 1308 aa13.85□□□□□ -0.19
Trim42-201ENSMUST00000035026 Eif4g1Q6NZJ6 1600 aaKnown RBP13.84□□□□□ -0.19
Trim42-201ENSMUST00000035026 Arhgap35Q91YM2 1499 aa13.81□□□□□ -0.2
Trim42-201ENSMUST00000035026 Gab3Q8BSM5 595 aa13.81□□□□□ -0.2
Trim42-201ENSMUST00000035026 Map3k1P53349 1493 aa13.8□□□□□ -0.2
Trim42-201ENSMUST00000035026 Npm2Q80W85 207 aa13.8□□□□□ -0.2
Trim42-201ENSMUST00000035026 Zeb1Q64318 1117 aa13.78□□□□□ -0.2
Trim42-201ENSMUST00000035026 Abca16E9PWJ7 1678 aa13.76□□□□□ -0.21
Trim42-201ENSMUST00000035026 Cep162Q6ZQ06 1403 aa13.76□□□□□ -0.21
Trim42-201ENSMUST00000035026 Adamts12Q811B3 1600 aa13.75□□□□□ -0.21
Trim42-201ENSMUST00000035026 Pabpn1Q8CCS6 302 aaKnown RBP13.75□□□□□ -0.21
Trim42-201ENSMUST00000035026 EprsQ8CGC7 1512 aaKnown RBP13.75□□□□□ -0.21
Trim42-201ENSMUST00000035026 Fgd6Q69ZL1 1399 aa13.75□□□□□ -0.21
Trim42-201ENSMUST00000035026 WizO88286 1684 aaKnown RBP13.74□□□□□ -0.21
Trim42-201ENSMUST00000035026 Carmil1Q6EDY6 1374 aa13.74□□□□□ -0.21
Trim42-201ENSMUST00000035026 TchhA0A0B4J1F9 1599 aa13.73□□□□□ -0.21
Trim42-201ENSMUST00000035026 Abcc2Q8VI47 1543 aa13.73□□□□□ -0.21
Trim42-201ENSMUST00000035026 PxdnQ3UQ28 1475 aa13.71□□□□□ -0.21
Trim42-201ENSMUST00000035026 Dnajc5P60904 198 aa13.71□□□□□ -0.21
Trim42-201ENSMUST00000035026 Plppr3Q7TPB0 716 aa13.7□□□□□ -0.22
Trim42-201ENSMUST00000035026 Col17a1Q07563 1470 aa13.7□□□□□ -0.22
Trim42-201ENSMUST00000035026 Dnmt1P13864 1620 aaKnown RBP13.7□□□□□ -0.22
Trim42-201ENSMUST00000035026 Las1lA2BE28 776 aaKnown RBP13.69□□□□□ -0.22
Trim42-201ENSMUST00000035026 Map3k4O08648 1597 aa13.68□□□□□ -0.22
Trim42-201ENSMUST00000035026 Polr1aO35134 1717 aaKnown RBP13.67□□□□□ -0.22
Trim42-201ENSMUST00000035026 Pelp1Q9DBD5 1123 aaKnown RBP13.66□□□□□ -0.22
Trim42-201ENSMUST00000035026 Clip1Q922J3 1391 aa13.65□□□□□ -0.22
Trim42-201ENSMUST00000035026 BC005561E9Q5E2 1589 aa13.65□□□□□ -0.23
Trim42-201ENSMUST00000035026 CadpsQ80TJ1 1355 aa13.64□□□□□ -0.23
Trim42-201ENSMUST00000035026 Abcc1O35379 1528 aa13.64□□□□□ -0.23
Trim42-201ENSMUST00000035026 Zcchc11B2RX14 1644 aaKnown RBP13.63□□□□□ -0.23
Trim42-201ENSMUST00000035026 Abca5Q8K448 1642 aa13.63□□□□□ -0.23
Trim42-201ENSMUST00000035026 Cux1P53564 1515 aa13.63□□□□□ -0.23
Trim42-201ENSMUST00000035026 Gm7298A0A0N4SVU1 1476 aa13.63□□□□□ -0.23
Trim42-201ENSMUST00000035026 AknaQ80VW7 1404 aa13.62□□□□□ -0.23
Trim42-201ENSMUST00000035026 Chd1P40201 1711 aa13.62□□□□□ -0.23
Trim42-201ENSMUST00000035026 Soga1E1U8D0 1418 aa13.61□□□□□ -0.23
Trim42-201ENSMUST00000035026 Arhgap27A2AB59 869 aa13.61□□□□□ -0.23
Trim42-201ENSMUST00000035026 Slx4Q6P1D7 1565 aa13.6□□□□□ -0.23
Trim42-201ENSMUST00000035026 Rpap1Q80TE0 1409 aa13.6□□□□□ -0.23
Trim42-201ENSMUST00000035026 Neo1P97798 1493 aa13.6□□□□□ -0.23
Trim42-201ENSMUST00000035026 Cep170Q6A065 1588 aa13.58□□□□□ -0.24
Trim42-201ENSMUST00000035026 Gapvd1Q6PAR5 1458 aa13.58□□□□□ -0.24
Trim42-201ENSMUST00000035026 Ankrd26Q811D2 1581 aa13.57□□□□□ -0.24
Trim42-201ENSMUST00000035026 Myt1lP97500 1187 aa13.56□□□□□ -0.24
Trim42-201ENSMUST00000035026 Fyco1Q8VDC1 1437 aa13.56□□□□□ -0.24
Trim42-201ENSMUST00000035026 Gm14025A2AP89 1413 aa13.52□□□□□ -0.24
Trim42-201ENSMUST00000035026 Adgrl3Q80TS3 1537 aa13.52□□□□□ -0.25
Trim42-201ENSMUST00000035026 Ythdc2B2RR83 1445 aaKnown RBP13.51□□□□□ -0.25
Trim42-201ENSMUST00000035026 PtprtQ99M80 1454 aa13.51□□□□□ -0.25
Trim42-201ENSMUST00000035026 Erich3F6QRE9 1637 aa13.51□□□□□ -0.25
Trim42-201ENSMUST00000035026 Arhgef12Q8R4H2 1543 aaKnown RBP13.51□□□□□ -0.25
Trim42-201ENSMUST00000035026 PrkcshO08795 521 aa13.49□□□□□ -0.25
Trim42-201ENSMUST00000035026 WrnO09053 1401 aa13.49□□□□□ -0.25
Trim42-201ENSMUST00000035026 Jph4Q80WT0 628 aa13.47□□□□□ -0.25
Trim42-201ENSMUST00000035026 Lmo7E9PYF4 1699 aaKnown RBP13.46□□□□□ -0.25
Trim42-201ENSMUST00000035026 Gm156Q58A37 223 aa13.46□□□□□ -0.25
Trim42-201ENSMUST00000035026 Rrbp1Q99PL5 1605 aaKnown RBP13.46□□□□□ -0.25
Trim42-201ENSMUST00000035026 Setd5Q5XJV7 1441 aa13.42□□□□□ -0.26
Trim42-201ENSMUST00000035026 Eea1Q8BL66 1411 aa13.41□□□□□ -0.26
Trim42-201ENSMUST00000035026 Pcf11G3X9Z4 1553 aa13.41□□□□□ -0.26
Trim42-201ENSMUST00000035026 AI481877A2ALV5 1481 aa13.4□□□□□ -0.26
Trim42-201ENSMUST00000035026 BlmO88700 1416 aa13.4□□□□□ -0.26
Trim42-201ENSMUST00000035026 Pprc1Q6NZN1 1644 aa13.4□□□□□ -0.26
Trim42-201ENSMUST00000035026 Arhgef5E9Q7D5 1581 aa13.39□□□□□ -0.27
Trim42-201ENSMUST00000035026 Setbp1Q9Z180 1582 aa13.39□□□□□ -0.27
Trim42-201ENSMUST00000035026 Kdm5bQ80Y84 1544 aa13.39□□□□□ -0.27
Trim42-201ENSMUST00000035026 Aebp1Q640N1 1128 aa13.38□□□□□ -0.27
Trim42-201ENSMUST00000035026 Arap1Q4LDD4 1452 aa13.38□□□□□ -0.27
Trim42-201ENSMUST00000035026 Arhgap31A6X8Z5 1425 aa13.37□□□□□ -0.27
Trim42-201ENSMUST00000035026 Rapgef6Q5NCJ1 1609 aa13.36□□□□□ -0.27
Trim42-201ENSMUST00000035026 Ccdc141E9Q8Q6 1531 aa13.36□□□□□ -0.27
Trim42-201ENSMUST00000035026 Cul7Q8VE73 1689 aa13.36□□□□□ -0.27
Trim42-201ENSMUST00000035026 Mroh2aD3Z750 1679 aa13.34□□□□□ -0.27
Trim42-201ENSMUST00000035026 NhsB1AV60 1647 aa13.33□□□□□ -0.27
Trim42-201ENSMUST00000035026 Ak9G3UYQ4 1894 aa13.33□□□□□ -0.28
Trim42-201ENSMUST00000035026 Kif27Q7M6Z4 1394 aa13.32□□□□□ -0.28
Trim42-201ENSMUST00000035026 Gcc2Q8CHG3 1679 aa13.31□□□□□ -0.28
Trim42-201ENSMUST00000035026 Fkbp15Q6P9Q6 1216 aaKnown RBP13.31□□□□□ -0.28
Trim42-201ENSMUST00000035026 Ncoa2Q61026 1462 aa13.31□□□□□ -0.28
Trim42-201ENSMUST00000035026 Igf1rQ60751 1373 aa13.3□□□□□ -0.28
Trim42-201ENSMUST00000035026 Lrrc9Q8CDN9 1456 aa13.3□□□□□ -0.28
Trim42-201ENSMUST00000035026 Arhgef11Q68FM7 1552 aa13.3□□□□□ -0.28
Trim42-201ENSMUST00000035026 Ap3b1Q9Z1T1 1105 aa13.3□□□□□ -0.28
Trim42-201ENSMUST00000035026 Peg3Q3URU2 1571 aa13.29□□□□□ -0.28
Trim42-201ENSMUST00000035026 CntlnA2AM05 1397 aa13.28□□□□□ -0.28
Trim42-201ENSMUST00000035026 Kiaa1210E9Q0C6 1637 aa13.28□□□□□ -0.28
Trim42-201ENSMUST00000035026 Znf608Q56A10 1511 aa13.27□□□□□ -0.29
Trim42-201ENSMUST00000035026 ArxO35085 564 aa13.26□□□□□ -0.29
Trim42-201ENSMUST00000035026 Fancd2Q80V62 1450 aa13.26□□□□□ -0.29
Trim42-201ENSMUST00000035026 Wdr7Q920I9 1489 aa13.26□□□□□ -0.29
Trim42-201ENSMUST00000035026 Tiam1Q60610 1591 aa13.25□□□□□ -0.29
Trim42-201ENSMUST00000035026 Magi1Q6RHR9 1471 aa13.25□□□□□ -0.29
Trim42-201ENSMUST00000035026 Gm1043A0A140LJC2 1431 aa13.24□□□□□ -0.29
Trim42-201ENSMUST00000035026 Naip1Q9QWK5 1403 aa13.24□□□□□ -0.29
Trim42-201ENSMUST00000035026 Clasp1Q80TV8 1535 aaKnown RBP13.24□□□□□ -0.29
Trim42-201ENSMUST00000035026 Ncoa3O09000 1398 aa13.23□□□□□ -0.29
Trim42-201ENSMUST00000035026 Aplp2Q06335 707 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 69.2 ms