RNA–Protein interactions for RNA: ENSMUST00000032487.13

Vamp1-201, Transcript of Vesicle-associated membrane protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Vamp1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-201ENSMUST00000032487 Chic1Q8CBW7 227 aa16.81■□□□□ 0.28
Vamp1-201ENSMUST00000032487 Hdac5Q9Z2V6 1113 aa16.81■□□□□ 0.28
Vamp1-201ENSMUST00000032487 Ttbk1Q6PCN3 1308 aa16.8■□□□□ 0.28
Vamp1-201ENSMUST00000032487 Plb1Q3TTY0 1478 aa16.78■□□□□ 0.28
Vamp1-201ENSMUST00000032487 Urb2E9Q7L1 1524 aaKnown RBP16.77■□□□□ 0.28
Vamp1-201ENSMUST00000032487 PogzQ8BZH4 1409 aaKnown RBP16.76■□□□□ 0.27
Vamp1-201ENSMUST00000032487 Crocc2F6XLV1 1638 aa16.76■□□□□ 0.27
Vamp1-201ENSMUST00000032487 Grin2bQ01097 1482 aa16.71■□□□□ 0.27
Vamp1-201ENSMUST00000032487 Duox2A2AQ99 1517 aa16.71■□□□□ 0.26
Vamp1-201ENSMUST00000032487 Eif4g3Q80XI3 1579 aaKnown RBP16.67■□□□□ 0.26
Vamp1-201ENSMUST00000032487 Top2aQ01320 1528 aaKnown RBP16.66■□□□□ 0.26
Vamp1-201ENSMUST00000032487 Fgd1P52734 960 aa16.66■□□□□ 0.26
Vamp1-201ENSMUST00000032487 TonslQ6NZL6 1363 aa16.66■□□□□ 0.26
Vamp1-201ENSMUST00000032487 Pelp1Q9DBD5 1123 aaKnown RBP16.64■□□□□ 0.25
Vamp1-201ENSMUST00000032487 UbtfP25976 765 aaKnown RBP16.63■□□□□ 0.25
Vamp1-201ENSMUST00000032487 Ift140E9PY46 1464 aa16.61■□□□□ 0.25
Vamp1-201ENSMUST00000032487 Efcab5A0JP43 1406 aa16.6■□□□□ 0.25
Vamp1-201ENSMUST00000032487 Nolc1E9Q5C9 702 aaKnown RBP16.6■□□□□ 0.25
Vamp1-201ENSMUST00000032487 Ap3b1Q9Z1T1 1105 aa16.57■□□□□ 0.24
Vamp1-201ENSMUST00000032487 NrkQ9R0G8 1455 aa16.55■□□□□ 0.24
Vamp1-201ENSMUST00000032487 Pknox2Q8BG99 474 aa16.54■□□□□ 0.24
Vamp1-201ENSMUST00000032487 Samd9lQ69Z37 1561 aa16.54■□□□□ 0.24
Vamp1-201ENSMUST00000032487 NrdcQ8BHG1 1161 aa16.54■□□□□ 0.24
Vamp1-201ENSMUST00000032487 Disp1Q3TDN0 1521 aa16.53■□□□□ 0.24
Vamp1-201ENSMUST00000032487 PtprkP35822 1457 aa16.51■□□□□ 0.23
Vamp1-201ENSMUST00000032487 Npm2Q80W85 207 aa16.5■□□□□ 0.23
Vamp1-201ENSMUST00000032487 Supt16hQ920B9 1047 aa16.5■□□□□ 0.23
Vamp1-201ENSMUST00000032487 Shroom4Q1W617 1475 aa16.49■□□□□ 0.23
Vamp1-201ENSMUST00000032487 Rad54l2Q99NG0 1466 aa16.49■□□□□ 0.23
Vamp1-201ENSMUST00000032487 Znf710Q3U288 666 aa16.49■□□□□ 0.23
Vamp1-201ENSMUST00000032487 Rusc2Q80U22 1514 aa16.48■□□□□ 0.23
Vamp1-201ENSMUST00000032487 Gtf3c3Q3TMP1 882 aa16.48■□□□□ 0.23
Vamp1-201ENSMUST00000032487 Plppr3Q7TPB0 716 aa16.47■□□□□ 0.23
Vamp1-201ENSMUST00000032487 Upf2A2AT37 1269 aaKnown RBP16.45■□□□□ 0.22
Vamp1-201ENSMUST00000032487 Nup160Q9Z0W3 1402 aaKnown RBP16.42■□□□□ 0.22
Vamp1-201ENSMUST00000032487 Cc2d2bA0A286YDU8 1405 aa16.42■□□□□ 0.22
Vamp1-201ENSMUST00000032487 CatipB9EKE5 520 aa16.42■□□□□ 0.22
Vamp1-201ENSMUST00000032487 Plcd4Q8K3R3 807 aa16.41■□□□□ 0.22
Vamp1-201ENSMUST00000032487 Grin2aP35436 1464 aa16.4■□□□□ 0.22
Vamp1-201ENSMUST00000032487 Pbrm1Q8BSQ9 1634 aaKnown RBP16.39■□□□□ 0.21
Vamp1-201ENSMUST00000032487 Setd1bQ8CFT2 1985 aa16.38■□□□□ 0.21
Vamp1-201ENSMUST00000032487 Calr4Q3TQS0 420 aa16.38■□□□□ 0.21
Vamp1-201ENSMUST00000032487 Pabpn1Q8CCS6 302 aaKnown RBP16.38■□□□□ 0.21
Vamp1-201ENSMUST00000032487 Shroom2A2ALU4 1481 aa16.38■□□□□ 0.21
Vamp1-201ENSMUST00000032487 Magi3Q9EQJ9 1476 aa16.37■□□□□ 0.21
Vamp1-201ENSMUST00000032487 SynmQ70IV5 1561 aa16.35■□□□□ 0.21
Vamp1-201ENSMUST00000032487 Dnajc5P60904 198 aa16.31■□□□□ 0.2
Vamp1-201ENSMUST00000032487 Irx3P81067 507 aa16.31■□□□□ 0.2
Vamp1-201ENSMUST00000032487 Ccdc27Q3V036 639 aa16.31■□□□□ 0.2
Vamp1-201ENSMUST00000032487 Ccdc9Q8VC31 543 aaKnown RBP16.31■□□□□ 0.2
Vamp1-201ENSMUST00000032487 Pla2r1Q62028 1487 aa16.3■□□□□ 0.2
Vamp1-201ENSMUST00000032487 AqrQ8CFQ3 1481 aaKnown RBP16.3■□□□□ 0.2
Vamp1-201ENSMUST00000032487 Rapgef2Q8CHG7 1496 aa16.29■□□□□ 0.2
Vamp1-201ENSMUST00000032487 Mroh2bQ7M6Y6 1581 aa16.29■□□□□ 0.2
Vamp1-201ENSMUST00000032487 Stra8P70278 393 aa16.29■□□□□ 0.2
Vamp1-201ENSMUST00000032487 Ncapd3Q6ZQK0 1506 aa16.25■□□□□ 0.19
Vamp1-201ENSMUST00000032487 Rpap1Q80TE0 1409 aa16.25■□□□□ 0.19
Vamp1-201ENSMUST00000032487 Fgd6Q69ZL1 1399 aa16.24■□□□□ 0.19
Vamp1-201ENSMUST00000032487 Myt1lP97500 1187 aa16.23■□□□□ 0.19
Vamp1-201ENSMUST00000032487 Arhgap35Q91YM2 1499 aa16.2■□□□□ 0.18
Vamp1-201ENSMUST00000032487 Arhgap27A2AB59 869 aa16.2■□□□□ 0.18
Vamp1-201ENSMUST00000032487 AknaQ80VW7 1404 aa16.19■□□□□ 0.18
Vamp1-201ENSMUST00000032487 Ipo4Q8VI75 1082 aa16.19■□□□□ 0.18
Vamp1-201ENSMUST00000032487 Ppp4r2Q0VGB7 417 aa16.19■□□□□ 0.18
Vamp1-201ENSMUST00000032487 Carmil1Q6EDY6 1374 aa16.19■□□□□ 0.18
Vamp1-201ENSMUST00000032487 Pak3Q61036 559 aa16.18■□□□□ 0.18
Vamp1-201ENSMUST00000032487 Cep162Q6ZQ06 1403 aa16.18■□□□□ 0.18
Vamp1-201ENSMUST00000032487 Washc2Q6PGL7 1334 aa16.17■□□□□ 0.18
Vamp1-201ENSMUST00000032487 EprsQ8CGC7 1512 aaKnown RBP16.17■□□□□ 0.18
Vamp1-201ENSMUST00000032487 Wdr43Q6ZQL4 677 aaKnown RBP16.16■□□□□ 0.18
Vamp1-201ENSMUST00000032487 ArxO35085 564 aa16.15■□□□□ 0.18
Vamp1-201ENSMUST00000032487 Gpatch8A2A6A1 1505 aa16.15■□□□□ 0.18
Vamp1-201ENSMUST00000032487 Map3k1P53349 1493 aa16.14■□□□□ 0.18
Vamp1-201ENSMUST00000032487 Col17a1Q07563 1470 aa16.14■□□□□ 0.17
Vamp1-201ENSMUST00000032487 WizO88286 1684 aaKnown RBP16.13■□□□□ 0.17
Vamp1-201ENSMUST00000032487 Egfem1Q8C088 590 aa16.13■□□□□ 0.17
Vamp1-201ENSMUST00000032487 Clip1Q922J3 1391 aa16.13■□□□□ 0.17
Vamp1-201ENSMUST00000032487 TchhA0A0B4J1F9 1599 aa16.12■□□□□ 0.17
Vamp1-201ENSMUST00000032487 Liat1Q810M6 228 aa16.12■□□□□ 0.17
Vamp1-201ENSMUST00000032487 PxdnQ3UQ28 1475 aa16.11■□□□□ 0.17
Vamp1-201ENSMUST00000032487 Hsp90aa1P07901 733 aaKnown RBP16.1■□□□□ 0.17
Vamp1-201ENSMUST00000032487 Adamts12Q811B3 1600 aa16.1■□□□□ 0.17
Vamp1-201ENSMUST00000032487 Abca16E9PWJ7 1678 aa16.09■□□□□ 0.17
Vamp1-201ENSMUST00000032487 CadpsQ80TJ1 1355 aa16.08■□□□□ 0.16
Vamp1-201ENSMUST00000032487 Eif4g1Q6NZJ6 1600 aaKnown RBP16.07■□□□□ 0.16
Vamp1-201ENSMUST00000032487 Abcc1O35379 1528 aa16.06■□□□□ 0.16
Vamp1-201ENSMUST00000032487 Kdm5bQ80Y84 1544 aa16.06■□□□□ 0.16
Vamp1-201ENSMUST00000032487 Abcc2Q8VI47 1543 aa16.06■□□□□ 0.16
Vamp1-201ENSMUST00000032487 Neo1P97798 1493 aa16.05■□□□□ 0.16
Vamp1-201ENSMUST00000032487 Gm7298A0A0N4SVU1 1476 aa16.05■□□□□ 0.16
Vamp1-201ENSMUST00000032487 Polr1aO35134 1717 aaKnown RBP16.04■□□□□ 0.16
Vamp1-201ENSMUST00000032487 Soga1E1U8D0 1418 aa16.04■□□□□ 0.16
Vamp1-201ENSMUST00000032487 Dnmt1P13864 1620 aaKnown RBP16.04■□□□□ 0.16
Vamp1-201ENSMUST00000032487 Gapvd1Q6PAR5 1458 aa16.03■□□□□ 0.16
Vamp1-201ENSMUST00000032487 Eid3Q3V124 375 aa16.03■□□□□ 0.16
Vamp1-201ENSMUST00000032487 Kcnn1Q9EQR3 537 aa16.03■□□□□ 0.16
Vamp1-201ENSMUST00000032487 Plekhg3Q4VAC9 1341 aa16.02■□□□□ 0.15
Vamp1-201ENSMUST00000032487 Zcchc11B2RX14 1644 aaKnown RBP16.01■□□□□ 0.15
Vamp1-201ENSMUST00000032487 Map3k4O08648 1597 aa16■□□□□ 0.15
Vamp1-201ENSMUST00000032487 Ipo9Q91YE6 1041 aa15.99■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 208.6 ms