RNA–Protein interactions for RNA: ENSMUST00000030336.10

Tnfrsf1b-201, Transcript of Tumor necrosis factor receptor superfamily member 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tnfrsf1b, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1b-201ENSMUST00000030336 Ncapd3Q6ZQK0 1506 aa13.09□□□□□ -0.31
Tnfrsf1b-201ENSMUST00000030336 Mrc2Q64449 1479 aa13.08□□□□□ -0.32
Tnfrsf1b-201ENSMUST00000030336 LrpprcQ6PB66 1392 aaKnown RBP13.07□□□□□ -0.32
Tnfrsf1b-201ENSMUST00000030336 PtprkP35822 1457 aa13.04□□□□□ -0.32
Tnfrsf1b-201ENSMUST00000030336 Dhx29Q6PGC1 1365 aaKnown RBP13.04□□□□□ -0.32
Tnfrsf1b-201ENSMUST00000030336 Tnnt3Q9QZ47 272 aa13.02□□□□□ -0.32
Tnfrsf1b-201ENSMUST00000030336 Znf710Q3U288 666 aa13.01□□□□□ -0.33
Tnfrsf1b-201ENSMUST00000030336 Slc24a1Q91WD8 1130 aa13.01□□□□□ -0.33
Tnfrsf1b-201ENSMUST00000030336 Grin2bQ01097 1482 aa13□□□□□ -0.33
Tnfrsf1b-201ENSMUST00000030336 Nolc1E9Q5C9 702 aaKnown RBP12.99□□□□□ -0.33
Tnfrsf1b-201ENSMUST00000030336 NclP09405 707 aaKnown RBP12.98□□□□□ -0.33
Tnfrsf1b-201ENSMUST00000030336 Rpap1Q80TE0 1409 aa12.97□□□□□ -0.33
Tnfrsf1b-201ENSMUST00000030336 Baz1bQ9Z277 1479 aa12.97□□□□□ -0.33
Tnfrsf1b-201ENSMUST00000030336 Shroom4Q1W617 1475 aa12.96□□□□□ -0.34
Tnfrsf1b-201ENSMUST00000030336 Duox2A2AQ99 1517 aa12.95□□□□□ -0.34
Tnfrsf1b-201ENSMUST00000030336 PogzQ8BZH4 1409 aaKnown RBP12.94□□□□□ -0.34
Tnfrsf1b-201ENSMUST00000030336 Fam50aQ9WV03 339 aaKnown RBP12.94□□□□□ -0.34
Tnfrsf1b-201ENSMUST00000030336 PrkcshO08795 521 aa12.94□□□□□ -0.34
Tnfrsf1b-201ENSMUST00000030336 NrkQ9R0G8 1455 aa12.93□□□□□ -0.34
Tnfrsf1b-201ENSMUST00000030336 Anp32aO35381 247 aa12.92□□□□□ -0.34
Tnfrsf1b-201ENSMUST00000030336 Kif21aQ9QXL2 1672 aa12.91□□□□□ -0.34
Tnfrsf1b-201ENSMUST00000030336 Arap1Q4LDD4 1452 aa12.9□□□□□ -0.34
Tnfrsf1b-201ENSMUST00000030336 Arhgap35Q91YM2 1499 aa12.89□□□□□ -0.35
Tnfrsf1b-201ENSMUST00000030336 Rad54l2Q99NG0 1466 aa12.89□□□□□ -0.35
Tnfrsf1b-201ENSMUST00000030336 Efcab5A0JP43 1406 aa12.89□□□□□ -0.35
Tnfrsf1b-201ENSMUST00000030336 Kdm5bQ80Y84 1544 aa12.88□□□□□ -0.35
Tnfrsf1b-201ENSMUST00000030336 Calr4Q3TQS0 420 aa12.88□□□□□ -0.35
Tnfrsf1b-201ENSMUST00000030336 Lmod2Q3UHZ5 550 aa12.87□□□□□ -0.35
Tnfrsf1b-201ENSMUST00000030336 Setd5Q5XJV7 1441 aa12.87□□□□□ -0.35
Tnfrsf1b-201ENSMUST00000030336 Urb2E9Q7L1 1524 aaKnown RBP12.86□□□□□ -0.35
Tnfrsf1b-201ENSMUST00000030336 Hspa5P20029 655 aaKnown RBP12.86□□□□□ -0.35
Tnfrsf1b-201ENSMUST00000030336 Plb1Q3TTY0 1478 aa12.86□□□□□ -0.35
Tnfrsf1b-201ENSMUST00000030336 Crocc2F6XLV1 1638 aa12.86□□□□□ -0.35
Tnfrsf1b-201ENSMUST00000030336 Sin3aQ60520 1274 aaKnown RBP12.85□□□□□ -0.35
Tnfrsf1b-201ENSMUST00000030336 Eif5bQ05D44 1216 aaKnown RBP12.84□□□□□ -0.35
Tnfrsf1b-201ENSMUST00000030336 Eea1Q8BL66 1411 aa12.82□□□□□ -0.36
Tnfrsf1b-201ENSMUST00000030336 Eif4g1Q6NZJ6 1600 aaKnown RBP12.81□□□□□ -0.36
Tnfrsf1b-201ENSMUST00000030336 Mroh2bQ7M6Y6 1581 aa12.81□□□□□ -0.36
Tnfrsf1b-201ENSMUST00000030336 Supt16hQ920B9 1047 aa12.8□□□□□ -0.36
Tnfrsf1b-201ENSMUST00000030336 BlmO88700 1416 aa12.79□□□□□ -0.36
Tnfrsf1b-201ENSMUST00000030336 Samd9lQ69Z37 1561 aa12.79□□□□□ -0.36
Tnfrsf1b-201ENSMUST00000030336 Ppp4r2Q0VGB7 417 aa12.79□□□□□ -0.36
Tnfrsf1b-201ENSMUST00000030336 Ttbk1Q6PCN3 1308 aa12.79□□□□□ -0.36
Tnfrsf1b-201ENSMUST00000030336 P3h3Q8CG70 732 aa12.78□□□□□ -0.36
Tnfrsf1b-201ENSMUST00000030336 AqrQ8CFQ3 1481 aaKnown RBP12.77□□□□□ -0.36
Tnfrsf1b-201ENSMUST00000030336 Carmil1Q6EDY6 1374 aa12.77□□□□□ -0.36
Tnfrsf1b-201ENSMUST00000030336 Stra8P70278 393 aa12.77□□□□□ -0.37
Tnfrsf1b-201ENSMUST00000030336 Arhgap27A2AB59 869 aa12.75□□□□□ -0.37
Tnfrsf1b-201ENSMUST00000030336 Arhgef5E9Q7D5 1581 aa12.74□□□□□ -0.37
Tnfrsf1b-201ENSMUST00000030336 Pak3Q61036 559 aa12.73□□□□□ -0.37
Tnfrsf1b-201ENSMUST00000030336 Fkbp15Q6P9Q6 1216 aaKnown RBP12.72□□□□□ -0.37
Tnfrsf1b-201ENSMUST00000030336 Map3k1P53349 1493 aa12.72□□□□□ -0.37
Tnfrsf1b-201ENSMUST00000030336 SynmQ70IV5 1561 aa12.72□□□□□ -0.37
Tnfrsf1b-201ENSMUST00000030336 Ube2uB1AUC4 352 aa12.71□□□□□ -0.37
Tnfrsf1b-201ENSMUST00000030336 Lrriq1Q0P5X1 1673 aa12.7□□□□□ -0.38
Tnfrsf1b-201ENSMUST00000030336 Slc4a3P16283 1227 aa12.68□□□□□ -0.38
Tnfrsf1b-201ENSMUST00000030336 Gm13697A2AK42 830 aa12.68□□□□□ -0.38
Tnfrsf1b-201ENSMUST00000030336 Naip1Q9QWK5 1403 aa12.68□□□□□ -0.38
Tnfrsf1b-201ENSMUST00000030336 Grin2aP35436 1464 aa12.67□□□□□ -0.38
Tnfrsf1b-201ENSMUST00000030336 Disp1Q3TDN0 1521 aa12.67□□□□□ -0.38
Tnfrsf1b-201ENSMUST00000030336 Aebp1Q640N1 1128 aa12.67□□□□□ -0.38
Tnfrsf1b-201ENSMUST00000030336 Wdr43Q6ZQL4 677 aaKnown RBP12.67□□□□□ -0.38
Tnfrsf1b-201ENSMUST00000030336 Ift140E9PY46 1464 aa12.67□□□□□ -0.38
Tnfrsf1b-201ENSMUST00000030336 Cux1P53564 1515 aa12.65□□□□□ -0.38
Tnfrsf1b-201ENSMUST00000030336 Pelp1Q9DBD5 1123 aaKnown RBP12.65□□□□□ -0.38
Tnfrsf1b-201ENSMUST00000030336 Smg6P61406 1418 aaKnown RBP12.64□□□□□ -0.39
Tnfrsf1b-201ENSMUST00000030336 EprsQ8CGC7 1512 aaKnown RBP12.64□□□□□ -0.39
Tnfrsf1b-201ENSMUST00000030336 Tiam1Q60610 1591 aa12.63□□□□□ -0.39
Tnfrsf1b-201ENSMUST00000030336 3425401B19RikD3Z1D3 1412 aa12.63□□□□□ -0.39
Tnfrsf1b-201ENSMUST00000030336 Chic2Q9D9G3 165 aa12.63□□□□□ -0.39
Tnfrsf1b-201ENSMUST00000030336 Pla2r1Q62028 1487 aa12.63□□□□□ -0.39
Tnfrsf1b-201ENSMUST00000030336 Mrs2Q5NCE8 434 aa12.62□□□□□ -0.39
Tnfrsf1b-201ENSMUST00000030336 Fyco1Q8VDC1 1437 aa12.62□□□□□ -0.39
Tnfrsf1b-201ENSMUST00000030336 Wwc2Q6NXJ0 1187 aa12.62□□□□□ -0.39
Tnfrsf1b-201ENSMUST00000030336 Magi3Q9EQJ9 1476 aa12.61□□□□□ -0.39
Tnfrsf1b-201ENSMUST00000030336 AknaQ80VW7 1404 aa12.6□□□□□ -0.39
Tnfrsf1b-201ENSMUST00000030336 Liat1Q810M6 228 aa12.6□□□□□ -0.39
Tnfrsf1b-201ENSMUST00000030336 Slx4Q6P1D7 1565 aa12.6□□□□□ -0.39
Tnfrsf1b-201ENSMUST00000030336 Ankrd26Q811D2 1581 aa12.59□□□□□ -0.39
Tnfrsf1b-201ENSMUST00000030336 Washc2Q6PGL7 1334 aa12.59□□□□□ -0.39
Tnfrsf1b-201ENSMUST00000030336 UacaQ8CGB3 1411 aa12.58□□□□□ -0.4
Tnfrsf1b-201ENSMUST00000030336 TchhA0A0B4J1F9 1599 aa12.58□□□□□ -0.4
Tnfrsf1b-201ENSMUST00000030336 Gm7298A0A0N4SVU1 1476 aa12.57□□□□□ -0.4
Tnfrsf1b-201ENSMUST00000030336 CadpsQ80TJ1 1355 aa12.57□□□□□ -0.4
Tnfrsf1b-201ENSMUST00000030336 Polr1aO35134 1717 aaKnown RBP12.57□□□□□ -0.4
Tnfrsf1b-201ENSMUST00000030336 Kcnh8P59111 1102 aa12.57□□□□□ -0.4
Tnfrsf1b-201ENSMUST00000030336 Kif27Q7M6Z4 1394 aa12.56□□□□□ -0.4
Tnfrsf1b-201ENSMUST00000030336 Rtl5Q5DTT4 599 aa12.56□□□□□ -0.4
Tnfrsf1b-201ENSMUST00000030336 Slc4a2P13808 1237 aaKnown RBP12.56□□□□□ -0.4
Tnfrsf1b-201ENSMUST00000030336 WrnO09053 1401 aa12.56□□□□□ -0.4
Tnfrsf1b-201ENSMUST00000030336 WizO88286 1684 aaKnown RBP12.55□□□□□ -0.4
Tnfrsf1b-201ENSMUST00000030336 Cc2d2bA0A286YDU8 1405 aa12.55□□□□□ -0.4
Tnfrsf1b-201ENSMUST00000030336 Egfem1Q8C088 590 aa12.55□□□□□ -0.4
Tnfrsf1b-201ENSMUST00000030336 Pcf11G3X9Z4 1553 aa12.54□□□□□ -0.4
Tnfrsf1b-201ENSMUST00000030336 CntlnA2AM05 1397 aa12.54□□□□□ -0.4
Tnfrsf1b-201ENSMUST00000030336 PxdnQ3UQ28 1475 aa12.53□□□□□ -0.4
Tnfrsf1b-201ENSMUST00000030336 Nup160Q9Z0W3 1402 aaKnown RBP12.52□□□□□ -0.4
Tnfrsf1b-201ENSMUST00000030336 Exoc6Q8R313 802 aa12.52□□□□□ -0.41
Tnfrsf1b-201ENSMUST00000030336 Hdac5Q9Z2V6 1113 aa12.52□□□□□ -0.41
Tnfrsf1b-201ENSMUST00000030336 Setd1bQ8CFT2 1985 aa12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 40.1 ms