RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Ccdc27Q3V036 639 aa16.39■□□□□ 0.22
Trim55-201ENSMUST00000029139 Cypt1Q8CH20 168 aa16.39■□□□□ 0.22
Trim55-201ENSMUST00000029139 Scaf1Q5U4C3 1256 aaKnown RBP16.34■□□□□ 0.21
Trim55-201ENSMUST00000029139 Supt16hQ920B9 1047 aa16.31■□□□□ 0.2
Trim55-201ENSMUST00000029139 TimelessQ9R1X4 1197 aa16.31■□□□□ 0.2
Trim55-201ENSMUST00000029139 Nolc1E9Q5C9 702 aaKnown RBP16.31■□□□□ 0.2
Trim55-201ENSMUST00000029139 AampJ3QN89 436 aa16.28■□□□□ 0.2
Trim55-201ENSMUST00000029139 Pabpn1Q8CCS6 302 aaKnown RBP16.27■□□□□ 0.2
Trim55-201ENSMUST00000029139 Kcnn1Q9EQR3 537 aa16.23■□□□□ 0.19
Trim55-201ENSMUST00000029139 Hsp90aa1P07901 733 aaKnown RBP16.2■□□□□ 0.18
Trim55-201ENSMUST00000029139 Eif5bQ05D44 1216 aaKnown RBP16.2■□□□□ 0.18
Trim55-201ENSMUST00000029139 Ppargc1bQ8VHJ7 1014 aa16.18■□□□□ 0.18
Trim55-201ENSMUST00000029139 NeflP08551 543 aa16.16■□□□□ 0.18
Trim55-201ENSMUST00000029139 Pcdh10E9PXQ7 1057 aa16.11■□□□□ 0.17
Trim55-201ENSMUST00000029139 Rtn4Q99P72 1162 aaKnown RBP16.11■□□□□ 0.17
Trim55-201ENSMUST00000029139 Kif21aQ9QXL2 1672 aa16.1■□□□□ 0.17
Trim55-201ENSMUST00000029139 Pdcl3Q8BVF2 240 aa16.09■□□□□ 0.17
Trim55-201ENSMUST00000029139 Myt1lP97500 1187 aa16.09■□□□□ 0.17
Trim55-201ENSMUST00000029139 Cep164Q5DU05 1446 aa16.07■□□□□ 0.16
Trim55-201ENSMUST00000029139 NgefQ8CHT1 710 aa16.06■□□□□ 0.16
Trim55-201ENSMUST00000029139 Dnttip2Q8R2M2 758 aaKnown RBP16.05■□□□□ 0.16
Trim55-201ENSMUST00000029139 Calr4Q3TQS0 420 aa16.05■□□□□ 0.16
Trim55-201ENSMUST00000029139 Cecr2E9Q2Z1 1453 aa16.04■□□□□ 0.16
Trim55-201ENSMUST00000029139 DmtnQ9WV69 405 aa16.03■□□□□ 0.16
Trim55-201ENSMUST00000029139 Znf710Q3U288 666 aa16■□□□□ 0.15
Trim55-201ENSMUST00000029139 Taok2Q6ZQ29 1240 aa16■□□□□ 0.15
Trim55-201ENSMUST00000029139 Ap3b1Q9Z1T1 1105 aa16■□□□□ 0.15
Trim55-201ENSMUST00000029139 Stra8P70278 393 aa15.99■□□□□ 0.15
Trim55-201ENSMUST00000029139 Rbm10Q99KG3 930 aaKnown RBP15.99■□□□□ 0.15
Trim55-201ENSMUST00000029139 Gtf2a1Q99PM3 378 aa15.99■□□□□ 0.15
Trim55-201ENSMUST00000029139 Anp32bQ9EST5 272 aaKnown RBP15.98■□□□□ 0.15
Trim55-201ENSMUST00000029139 Adgrl3Q80TS3 1537 aa15.95■□□□□ 0.14
Trim55-201ENSMUST00000029139 4933416C03RikQ3V063 378 aa15.94■□□□□ 0.14
Trim55-201ENSMUST00000029139 Ccdc136Q3TVA9 1136 aa15.93■□□□□ 0.14
Trim55-201ENSMUST00000029139 TonslQ6NZL6 1363 aa15.91■□□□□ 0.14
Trim55-201ENSMUST00000029139 Wdr43Q6ZQL4 677 aaKnown RBP15.89■□□□□ 0.13
Trim55-201ENSMUST00000029139 Rrp9Q91WM3 475 aaKnown RBP15.88■□□□□ 0.13
Trim55-201ENSMUST00000029139 Ppp4r2Q0VGB7 417 aa15.86■□□□□ 0.13
Trim55-201ENSMUST00000029139 Pak3Q61036 559 aa15.86■□□□□ 0.13
Trim55-201ENSMUST00000029139 Rusc2Q80U22 1514 aa15.85■□□□□ 0.13
Trim55-201ENSMUST00000029139 Plb1Q3TTY0 1478 aa15.84■□□□□ 0.13
Trim55-201ENSMUST00000029139 Ipo9Q91YE6 1041 aa15.83■□□□□ 0.13
Trim55-201ENSMUST00000029139 PtprtQ99M80 1454 aa15.83■□□□□ 0.12
Trim55-201ENSMUST00000029139 Vgll3P85442 326 aa15.83■□□□□ 0.12
Trim55-201ENSMUST00000029139 Egfem1Q8C088 590 aa15.8■□□□□ 0.12
Trim55-201ENSMUST00000029139 Ccer2J3QPU5 274 aa15.8■□□□□ 0.12
Trim55-201ENSMUST00000029139 Washc2Q6PGL7 1334 aa15.79■□□□□ 0.12
Trim55-201ENSMUST00000029139 Cux2P70298 1426 aa15.78■□□□□ 0.12
Trim55-201ENSMUST00000029139 Armcx1Q9CX83 456 aa15.78■□□□□ 0.12
Trim55-201ENSMUST00000029139 Liat1Q810M6 228 aa15.77■□□□□ 0.12
Trim55-201ENSMUST00000029139 Chrna2Q91X60 512 aa15.76■□□□□ 0.11
Trim55-201ENSMUST00000029139 Urb2E9Q7L1 1524 aaKnown RBP15.75■□□□□ 0.11
Trim55-201ENSMUST00000029139 Cttnbp2B9EJA2 1648 aa15.75■□□□□ 0.11
Trim55-201ENSMUST00000029139 DaxxO35613 739 aa15.75■□□□□ 0.11
Trim55-201ENSMUST00000029139 Iqcf3Q9D498 203 aa15.72■□□□□ 0.11
Trim55-201ENSMUST00000029139 Znf692Q3U381 531 aa15.71■□□□□ 0.11
Trim55-201ENSMUST00000029139 Plekhg3Q4VAC9 1341 aa15.71■□□□□ 0.11
Trim55-201ENSMUST00000029139 Tshz2Q68FE9 1030 aa15.71■□□□□ 0.1
Trim55-201ENSMUST00000029139 Cep170Q6A065 1588 aa15.7■□□□□ 0.1
Trim55-201ENSMUST00000029139 Ythdc1E9Q5K9 736 aaKnown RBP15.7■□□□□ 0.1
Trim55-201ENSMUST00000029139 AU015836B2RUM3 263 aa15.69■□□□□ 0.1
Trim55-201ENSMUST00000029139 Rsph4aQ8BYM7 716 aa15.68■□□□□ 0.1
Trim55-201ENSMUST00000029139 PtprkP35822 1457 aa15.66■□□□□ 0.1
Trim55-201ENSMUST00000029139 Ube2uB1AUC4 352 aa15.66■□□□□ 0.1
Trim55-201ENSMUST00000029139 Zfp91Q62511 572 aa15.65■□□□□ 0.1
Trim55-201ENSMUST00000029139 Pprc1Q6NZN1 1644 aa15.64■□□□□ 0.09
Trim55-201ENSMUST00000029139 Ift140E9PY46 1464 aa15.64■□□□□ 0.09
Trim55-201ENSMUST00000029139 Fbxo41Q6NS60 873 aa15.6■□□□□ 0.09
Trim55-201ENSMUST00000029139 Zbtb4Q5F293 982 aa15.59■□□□□ 0.09
Trim55-201ENSMUST00000029139 Fam43aQ8BUP8 424 aa15.59■□□□□ 0.09
Trim55-201ENSMUST00000029139 Cul9Q80TT8 1865 aa15.59■□□□□ 0.09
Trim55-201ENSMUST00000029139 Alpk3Q924C5 1678 aa15.59■□□□□ 0.09
Trim55-201ENSMUST00000029139 ArxO35085 564 aa15.58■□□□□ 0.08
Trim55-201ENSMUST00000029139 Arhgef11Q68FM7 1552 aa15.58■□□□□ 0.08
Trim55-201ENSMUST00000029139 Lamc3Q9R0B6 1581 aa15.57■□□□□ 0.08
Trim55-201ENSMUST00000029139 Ube2q2Q8K2Z8 378 aa15.57■□□□□ 0.08
Trim55-201ENSMUST00000029139 Stard8Q8K031 1019 aa15.55■□□□□ 0.08
Trim55-201ENSMUST00000029139 DekQ7TNV0 380 aaKnown RBP15.54■□□□□ 0.08
Trim55-201ENSMUST00000029139 Pbrm1Q8BSQ9 1634 aaKnown RBP15.53■□□□□ 0.08
Trim55-201ENSMUST00000029139 CftrP26361 1476 aa15.53■□□□□ 0.08
Trim55-201ENSMUST00000029139 ChgaP26339 463 aaKnown RBP15.52■□□□□ 0.08
Trim55-201ENSMUST00000029139 Rpap1Q80TE0 1409 aa15.51■□□□□ 0.07
Trim55-201ENSMUST00000029139 Gapvd1Q6PAR5 1458 aa15.51■□□□□ 0.07
Trim55-201ENSMUST00000029139 UbtfP25976 765 aaKnown RBP15.5■□□□□ 0.07
Trim55-201ENSMUST00000029139 Nom1Q3UFM5 854 aaKnown RBP15.49■□□□□ 0.07
Trim55-201ENSMUST00000029139 Gm156Q58A37 223 aa15.49■□□□□ 0.07
Trim55-201ENSMUST00000029139 Fbxo3Q9DC63 480 aa15.48■□□□□ 0.07
Trim55-201ENSMUST00000029139 Dusp27Q148W8 1138 aa15.48■□□□□ 0.07
Trim55-201ENSMUST00000029139 Crocc2F6XLV1 1638 aa15.48■□□□□ 0.07
Trim55-201ENSMUST00000029139 Setbp1Q9Z180 1582 aa15.47■□□□□ 0.07
Trim55-201ENSMUST00000029139 Tex2Q6ZPJ0 1128 aaKnown RBP15.44■□□□□ 0.06
Trim55-201ENSMUST00000029139 Kif15Q6P9L6 1387 aa15.44■□□□□ 0.06
Trim55-201ENSMUST00000029139 Ccdc88bQ4QRL3 1481 aa15.42■□□□□ 0.06
Trim55-201ENSMUST00000029139 4933402E13RikQ9D4D2 429 aa15.42■□□□□ 0.06
Trim55-201ENSMUST00000029139 AdgbG3UZ78 1657 aa15.4■□□□□ 0.06
Trim55-201ENSMUST00000029139 Znf326O88291 580 aa15.4■□□□□ 0.06
Trim55-201ENSMUST00000029139 EprsQ8CGC7 1512 aaKnown RBP15.38■□□□□ 0.05
Trim55-201ENSMUST00000029139 Ercc6l2Q9JIM3 1537 aa15.37■□□□□ 0.05
Trim55-201ENSMUST00000029139 Tcerg1Q8CGF7 1100 aaKnown RBP15.37■□□□□ 0.05
Trim55-201ENSMUST00000029139 Dhx29Q6PGC1 1365 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms