RNA–Protein interactions for RNA: ENSMUST00000028841.13

Usp8-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp8, Length 4,145 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8-201ENSMUST00000028841 Ccdc136Q3TVA9 1136 aa12.35□□□□□ -0.43
Usp8-201ENSMUST00000028841 Shroom4Q1W617 1475 aa12.33□□□□□ -0.44
Usp8-201ENSMUST00000028841 Rad54l2Q99NG0 1466 aa12.33□□□□□ -0.44
Usp8-201ENSMUST00000028841 Cul7Q8VE73 1689 aa12.33□□□□□ -0.44
Usp8-201ENSMUST00000028841 Abca5Q8K448 1642 aa12.32□□□□□ -0.44
Usp8-201ENSMUST00000028841 Ccdc88bQ4QRL3 1481 aa12.31□□□□□ -0.44
Usp8-201ENSMUST00000028841 Abcc1O35379 1528 aa12.3□□□□□ -0.44
Usp8-201ENSMUST00000028841 Slx4Q6P1D7 1565 aa12.3□□□□□ -0.44
Usp8-201ENSMUST00000028841 WizO88286 1684 aaKnown RBP12.3□□□□□ -0.44
Usp8-201ENSMUST00000028841 Gapvd1Q6PAR5 1458 aa12.29□□□□□ -0.44
Usp8-201ENSMUST00000028841 Rapgef2Q8CHG7 1496 aa12.28□□□□□ -0.44
Usp8-201ENSMUST00000028841 Npm1Q61937 292 aaKnown RBP12.28□□□□□ -0.44
Usp8-201ENSMUST00000028841 EprsQ8CGC7 1512 aaKnown RBP12.27□□□□□ -0.45
Usp8-201ENSMUST00000028841 Ak9G3UYQ4 1894 aa12.26□□□□□ -0.45
Usp8-201ENSMUST00000028841 Pabpn1Q8CCS6 302 aaKnown RBP12.26□□□□□ -0.45
Usp8-201ENSMUST00000028841 PxdnQ3UQ28 1475 aa12.25□□□□□ -0.45
Usp8-201ENSMUST00000028841 Ttc37F8VPK0 1563 aa12.23□□□□□ -0.45
Usp8-201ENSMUST00000028841 Pcdh10E9PXQ7 1057 aa12.21□□□□□ -0.45
Usp8-201ENSMUST00000028841 Map3k1P53349 1493 aa12.2□□□□□ -0.46
Usp8-201ENSMUST00000028841 Fgd6Q69ZL1 1399 aa12.19□□□□□ -0.46
Usp8-201ENSMUST00000028841 Clasp1Q80TV8 1535 aaKnown RBP12.19□□□□□ -0.46
Usp8-201ENSMUST00000028841 TchhA0A0B4J1F9 1599 aa12.18□□□□□ -0.46
Usp8-201ENSMUST00000028841 Mroh2bQ7M6Y6 1581 aa12.18□□□□□ -0.46
Usp8-201ENSMUST00000028841 AdgbG3UZ78 1657 aa12.17□□□□□ -0.46
Usp8-201ENSMUST00000028841 Mapkbp1Q6NS57 1503 aa12.16□□□□□ -0.46
Usp8-201ENSMUST00000028841 Neo1P97798 1493 aa12.15□□□□□ -0.46
Usp8-201ENSMUST00000028841 Alpk3Q924C5 1678 aa12.15□□□□□ -0.46
Usp8-201ENSMUST00000028841 NhsB1AV60 1647 aa12.14□□□□□ -0.47
Usp8-201ENSMUST00000028841 Esf1Q3V1V3 845 aaKnown RBP12.13□□□□□ -0.47
Usp8-201ENSMUST00000028841 AI481877A2ALV5 1481 aa12.12□□□□□ -0.47
Usp8-201ENSMUST00000028841 Ythdc2B2RR83 1445 aaKnown RBP12.12□□□□□ -0.47
Usp8-201ENSMUST00000028841 Gm156Q58A37 223 aa12.12□□□□□ -0.47
Usp8-201ENSMUST00000028841 Rrbp1Q99PL5 1605 aaKnown RBP12.11□□□□□ -0.47
Usp8-201ENSMUST00000028841 Kiaa1210E9Q0C6 1637 aa12.09□□□□□ -0.47
Usp8-201ENSMUST00000028841 Lrrc9Q8CDN9 1456 aa12.09□□□□□ -0.47
Usp8-201ENSMUST00000028841 Kiaa0556Q8C753 1610 aa12.07□□□□□ -0.48
Usp8-201ENSMUST00000028841 Kdm5bQ80Y84 1544 aa12.06□□□□□ -0.48
Usp8-201ENSMUST00000028841 Gcc2Q8CHG3 1679 aa12.06□□□□□ -0.48
Usp8-201ENSMUST00000028841 CadpsQ80TJ1 1355 aa12.05□□□□□ -0.48
Usp8-201ENSMUST00000028841 Mroh2aD3Z750 1679 aa12.04□□□□□ -0.48
Usp8-201ENSMUST00000028841 Soga1E1U8D0 1418 aa12.02□□□□□ -0.48
Usp8-201ENSMUST00000028841 Arhgap35Q91YM2 1499 aa12.02□□□□□ -0.48
Usp8-201ENSMUST00000028841 AglF8VPN4 1532 aa11.99□□□□□ -0.49
Usp8-201ENSMUST00000028841 Abca8bQ8K440 1620 aa11.99□□□□□ -0.49
Usp8-201ENSMUST00000028841 Cux1P53564 1515 aa11.99□□□□□ -0.49
Usp8-201ENSMUST00000028841 Arhgef11Q68FM7 1552 aa11.97□□□□□ -0.49
Usp8-201ENSMUST00000028841 Znf608Q56A10 1511 aa11.96□□□□□ -0.49
Usp8-201ENSMUST00000028841 Lmo7E9PYF4 1699 aaKnown RBP11.96□□□□□ -0.49
Usp8-201ENSMUST00000028841 Cul9Q80TT8 1865 aa11.96□□□□□ -0.5
Usp8-201ENSMUST00000028841 Erich3F6QRE9 1637 aa11.95□□□□□ -0.5
Usp8-201ENSMUST00000028841 Zfyve16Q80U44 1528 aa11.94□□□□□ -0.5
Usp8-201ENSMUST00000028841 Gm14025A2AP89 1413 aa11.93□□□□□ -0.5
Usp8-201ENSMUST00000028841 Gm7298A0A0N4SVU1 1476 aa11.93□□□□□ -0.5
Usp8-201ENSMUST00000028841 Il27Q8K3I6 234 aa11.93□□□□□ -0.5
Usp8-201ENSMUST00000028841 Adamtsl3G3UXC7 1706 aa11.93□□□□□ -0.5
Usp8-201ENSMUST00000028841 Abca9Q8K449 1623 aa11.92□□□□□ -0.5
Usp8-201ENSMUST00000028841 Ankrd26Q811D2 1581 aa11.92□□□□□ -0.5
Usp8-201ENSMUST00000028841 Polr1aO35134 1717 aaKnown RBP11.91□□□□□ -0.5
Usp8-201ENSMUST00000028841 Depdc5P61460 1591 aa11.9□□□□□ -0.51
Usp8-201ENSMUST00000028841 Chic1Q8CBW7 227 aa11.89□□□□□ -0.51
Usp8-201ENSMUST00000028841 Fam208aQ69ZR9 1610 aaKnown RBP11.89□□□□□ -0.51
Usp8-201ENSMUST00000028841 Cdc42bpaQ3UU96 1719 aa11.87□□□□□ -0.51
Usp8-201ENSMUST00000028841 BlmO88700 1416 aa11.86□□□□□ -0.51
Usp8-201ENSMUST00000028841 Fndc1E9Q043 1732 aa11.86□□□□□ -0.51
Usp8-201ENSMUST00000028841 Pdcd11Q6NS46 1862 aaKnown RBP11.85□□□□□ -0.51
Usp8-201ENSMUST00000028841 Qser1A2BIE1 1698 aa11.85□□□□□ -0.51
Usp8-201ENSMUST00000028841 Carmil1Q6EDY6 1374 aa11.84□□□□□ -0.51
Usp8-201ENSMUST00000028841 AknaQ80VW7 1404 aa11.84□□□□□ -0.51
Usp8-201ENSMUST00000028841 Brwd3A2AHJ4 1799 aa11.82□□□□□ -0.52
Usp8-201ENSMUST00000028841 Wdr7Q920I9 1489 aa11.82□□□□□ -0.52
Usp8-201ENSMUST00000028841 Rapgef6Q5NCJ1 1609 aa11.81□□□□□ -0.52
Usp8-201ENSMUST00000028841 Rnf17Q99MV7 1640 aa11.8□□□□□ -0.52
Usp8-201ENSMUST00000028841 Pelp1Q9DBD5 1123 aaKnown RBP11.8□□□□□ -0.52
Usp8-201ENSMUST00000028841 Kdm6bQ5NCY0 1641 aa11.79□□□□□ -0.52
Usp8-201ENSMUST00000028841 Kiaa1551Q5DTW7 1521 aa11.78□□□□□ -0.52
Usp8-201ENSMUST00000028841 Cngb1E1AZ71 1325 aa11.78□□□□□ -0.52
Usp8-201ENSMUST00000028841 Kidins220E9Q9B7 1793 aa11.77□□□□□ -0.53
Usp8-201ENSMUST00000028841 Hecw2Q6I6G8 1578 aa11.75□□□□□ -0.53
Usp8-201ENSMUST00000028841 Dnajc5gQ8C632 165 aa11.75□□□□□ -0.53
Usp8-201ENSMUST00000028841 Rpap1Q80TE0 1409 aa11.75□□□□□ -0.53
Usp8-201ENSMUST00000028841 Igf1rQ60751 1373 aa11.73□□□□□ -0.53
Usp8-201ENSMUST00000028841 Kif14L0N7N1 1674 aaKnown RBP11.72□□□□□ -0.53
Usp8-201ENSMUST00000028841 Trpm1Q2TV84 1622 aa11.72□□□□□ -0.53
Usp8-201ENSMUST00000028841 Jph4Q80WT0 628 aa11.71□□□□□ -0.53
Usp8-201ENSMUST00000028841 Kdm5cP41230 1554 aa11.71□□□□□ -0.54
Usp8-201ENSMUST00000028841 Arap1Q4LDD4 1452 aa11.69□□□□□ -0.54
Usp8-201ENSMUST00000028841 Zmym4A2A791 1549 aaKnown RBP11.69□□□□□ -0.54
Usp8-201ENSMUST00000028841 Gm32742A0A1B0GT42 1604 aa11.69□□□□□ -0.54
Usp8-201ENSMUST00000028841 Peg3Q3URU2 1571 aa11.69□□□□□ -0.54
Usp8-201ENSMUST00000028841 Fyco1Q8VDC1 1437 aa11.68□□□□□ -0.54
Usp8-201ENSMUST00000028841 Ccdc141E9Q8Q6 1531 aa11.68□□□□□ -0.54
Usp8-201ENSMUST00000028841 Cep162Q6ZQ06 1403 aa11.67□□□□□ -0.54
Usp8-201ENSMUST00000028841 Fancd2Q80V62 1450 aa11.67□□□□□ -0.54
Usp8-201ENSMUST00000028841 Pcf11G3X9Z4 1553 aa11.67□□□□□ -0.54
Usp8-201ENSMUST00000028841 WrnO09053 1401 aa11.66□□□□□ -0.54
Usp8-201ENSMUST00000028841 Prex2Q3LAC4 1598 aa11.65□□□□□ -0.54
Usp8-201ENSMUST00000028841 Atp10dQ8K2X1 1416 aa11.65□□□□□ -0.55
Usp8-201ENSMUST00000028841 Arhgap27A2AB59 869 aa11.64□□□□□ -0.55
Usp8-201ENSMUST00000028841 Arhgap31A6X8Z5 1425 aa11.63□□□□□ -0.55
Usp8-201ENSMUST00000028841 Neurl4Q5NCX5 1563 aa11.62□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 103.4 ms