RNA–Protein interactions for RNA: ENSMUST00000028752.7

Vps39-201, Transcript of Vam6/Vps39-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps39, Length 4,339 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39-201ENSMUST00000028752 Rad21Q61550 635 aaKnown RBP12.57□□□□□ -0.4
Vps39-201ENSMUST00000028752 Baz1aO88379 1555 aa12.57□□□□□ -0.4
Vps39-201ENSMUST00000028752 Gtf3c3Q3TMP1 882 aa12.56□□□□□ -0.4
Vps39-201ENSMUST00000028752 BlmO88700 1416 aa12.55□□□□□ -0.4
Vps39-201ENSMUST00000028752 Os9Q8K2C7 672 aa12.55□□□□□ -0.4
Vps39-201ENSMUST00000028752 Ccdc88bQ4QRL3 1481 aa12.52□□□□□ -0.41
Vps39-201ENSMUST00000028752 Gm13697A2AK42 830 aa12.5□□□□□ -0.41
Vps39-201ENSMUST00000028752 Tcerg1Q8CGF7 1100 aaKnown RBP12.5□□□□□ -0.41
Vps39-201ENSMUST00000028752 Chic2Q9D9G3 165 aa12.5□□□□□ -0.41
Vps39-201ENSMUST00000028752 Ipo9Q91YE6 1041 aa12.49□□□□□ -0.41
Vps39-201ENSMUST00000028752 Setd5Q5XJV7 1441 aa12.49□□□□□ -0.41
Vps39-201ENSMUST00000028752 Zbtb7cQ8VCZ7 619 aa12.48□□□□□ -0.41
Vps39-201ENSMUST00000028752 Trim30dE9PWL0 497 aa12.46□□□□□ -0.42
Vps39-201ENSMUST00000028752 Polr3glQ8R0C0 218 aa12.46□□□□□ -0.42
Vps39-201ENSMUST00000028752 Wwc2Q6NXJ0 1187 aa12.45□□□□□ -0.42
Vps39-201ENSMUST00000028752 Hspa5P20029 655 aaKnown RBP12.45□□□□□ -0.42
Vps39-201ENSMUST00000028752 Pknox2Q8BG99 474 aa12.45□□□□□ -0.42
Vps39-201ENSMUST00000028752 Hsp90ab1P11499 724 aaKnown RBP12.44□□□□□ -0.42
Vps39-201ENSMUST00000028752 Nlrp6Q91WS2 869 aa12.43□□□□□ -0.42
Vps39-201ENSMUST00000028752 AU015836B2RUM3 263 aa12.42□□□□□ -0.42
Vps39-201ENSMUST00000028752 Trim44Q9QXA7 346 aa12.42□□□□□ -0.42
Vps39-201ENSMUST00000028752 Ppm1gQ61074 542 aa12.41□□□□□ -0.42
Vps39-201ENSMUST00000028752 Sin3aQ60520 1274 aaKnown RBP12.4□□□□□ -0.42
Vps39-201ENSMUST00000028752 Eea1Q8BL66 1411 aa12.4□□□□□ -0.42
Vps39-201ENSMUST00000028752 Htatsf1Q8BGC0 757 aa12.4□□□□□ -0.42
Vps39-201ENSMUST00000028752 Znf710Q3U288 666 aa12.39□□□□□ -0.43
Vps39-201ENSMUST00000028752 B4galnt3Q6L8S8 986 aa12.38□□□□□ -0.43
Vps39-201ENSMUST00000028752 Plcd4Q8K3R3 807 aa12.38□□□□□ -0.43
Vps39-201ENSMUST00000028752 Ythdc1E9Q5K9 736 aaKnown RBP12.37□□□□□ -0.43
Vps39-201ENSMUST00000028752 DekQ7TNV0 380 aaKnown RBP12.37□□□□□ -0.43
Vps39-201ENSMUST00000028752 Dbr1Q923B1 550 aa12.37□□□□□ -0.43
Vps39-201ENSMUST00000028752 Spryd3E9Q9B3 442 aa12.37□□□□□ -0.43
Vps39-201ENSMUST00000028752 Lmod3E9QA62 571 aa12.37□□□□□ -0.43
Vps39-201ENSMUST00000028752 Prdm10Q3UTQ7 1184 aa12.37□□□□□ -0.43
Vps39-201ENSMUST00000028752 Vsig10D3YX43 558 aa12.36□□□□□ -0.43
Vps39-201ENSMUST00000028752 ChgaP26339 463 aaKnown RBP12.34□□□□□ -0.43
Vps39-201ENSMUST00000028752 Npm1Q61937 292 aaKnown RBP12.34□□□□□ -0.43
Vps39-201ENSMUST00000028752 Cep162Q6ZQ06 1403 aa12.34□□□□□ -0.43
Vps39-201ENSMUST00000028752 Exoc6Q8R313 802 aa12.34□□□□□ -0.43
Vps39-201ENSMUST00000028752 Taok2Q6ZQ29 1240 aa12.33□□□□□ -0.43
Vps39-201ENSMUST00000028752 Dnai1Q8C0M8 701 aa12.32□□□□□ -0.44
Vps39-201ENSMUST00000028752 Dnttip2Q8R2M2 758 aaKnown RBP12.31□□□□□ -0.44
Vps39-201ENSMUST00000028752 Rgl3Q3UYI5 709 aa12.31□□□□□ -0.44
Vps39-201ENSMUST00000028752 Apbb1Q9QXJ1 710 aa12.31□□□□□ -0.44
Vps39-201ENSMUST00000028752 Plcb2A3KGF7 1181 aa12.28□□□□□ -0.44
Vps39-201ENSMUST00000028752 Pak3Q61036 559 aa12.28□□□□□ -0.44
Vps39-201ENSMUST00000028752 Arid4bA2CG63 1314 aaKnown RBP12.27□□□□□ -0.44
Vps39-201ENSMUST00000028752 Smg6P61406 1418 aaKnown RBP12.27□□□□□ -0.45
Vps39-201ENSMUST00000028752 Rangap1P46061 589 aaKnown RBP12.26□□□□□ -0.45
Vps39-201ENSMUST00000028752 NacadQ5SWP3 1504 aa12.26□□□□□ -0.45
Vps39-201ENSMUST00000028752 Chmp5Q9D7S9 219 aa12.25□□□□□ -0.45
Vps39-201ENSMUST00000028752 Baz1bQ9Z277 1479 aa12.25□□□□□ -0.45
Vps39-201ENSMUST00000028752 Cwc22Q8C5N3 908 aaKnown RBP12.25□□□□□ -0.45
Vps39-201ENSMUST00000028752 Mia2Q91ZV0 1396 aa12.25□□□□□ -0.45
Vps39-201ENSMUST00000028752 Gm13695A2AK44 830 aa12.23□□□□□ -0.45
Vps39-201ENSMUST00000028752 Erich6D3Z6S9 713 aa12.22□□□□□ -0.45
Vps39-201ENSMUST00000028752 Card11Q8CIS0 1159 aa12.22□□□□□ -0.45
Vps39-201ENSMUST00000028752 Grwd1Q810D6 446 aaKnown RBP12.2□□□□□ -0.46
Vps39-201ENSMUST00000028752 EspnQ9ET47 871 aa12.2□□□□□ -0.46
Vps39-201ENSMUST00000028752 Mbd3Q9Z2D8 285 aaKnown RBP12.19□□□□□ -0.46
Vps39-201ENSMUST00000028752 PtmaP26350 111 aa12.19□□□□□ -0.46
Vps39-201ENSMUST00000028752 Rtn4Q99P72 1162 aaKnown RBP12.19□□□□□ -0.46
Vps39-201ENSMUST00000028752 Trim26Q99PN3 545 aa12.18□□□□□ -0.46
Vps39-201ENSMUST00000028752 Neurod2Q62414 383 aa12.17□□□□□ -0.46
Vps39-201ENSMUST00000028752 Kdm5dQ62240 1548 aa12.17□□□□□ -0.46
Vps39-201ENSMUST00000028752 Rwdd1Q9CQK7 243 aa12.16□□□□□ -0.46
Vps39-201ENSMUST00000028752 Ipo4Q8VI75 1082 aa12.16□□□□□ -0.46
Vps39-201ENSMUST00000028752 Washc2Q6PGL7 1334 aa12.15□□□□□ -0.46
Vps39-201ENSMUST00000028752 Sart3Q9JLI8 962 aaKnown RBP12.15□□□□□ -0.46
Vps39-201ENSMUST00000028752 Armcx1Q9CX83 456 aa12.15□□□□□ -0.47
Vps39-201ENSMUST00000028752 Tnnt2P50752 301 aa12.14□□□□□ -0.47
Vps39-201ENSMUST00000028752 CntlnA2AM05 1397 aa12.13□□□□□ -0.47
Vps39-201ENSMUST00000028752 CatipB9EKE5 520 aa12.12□□□□□ -0.47
Vps39-201ENSMUST00000028752 Pdcl3Q8BVF2 240 aa12.12□□□□□ -0.47
Vps39-201ENSMUST00000028752 Ccdc18Q640L5 1455 aa12.12□□□□□ -0.47
Vps39-201ENSMUST00000028752 Rrp12Q6P5B0 1295 aaKnown RBP12.12□□□□□ -0.47
Vps39-201ENSMUST00000028752 Ipo8Q7TMY7 1010 aa12.12□□□□□ -0.47
Vps39-201ENSMUST00000028752 Rapgef2Q8CHG7 1496 aa12.12□□□□□ -0.47
Vps39-201ENSMUST00000028752 Zscan21Q07231 555 aa12.11□□□□□ -0.47
Vps39-201ENSMUST00000028752 Mak16Q8BGS0 296 aaKnown RBP12.11□□□□□ -0.47
Vps39-201ENSMUST00000028752 Mre11Q61216 706 aa12.1□□□□□ -0.47
Vps39-201ENSMUST00000028752 Pkd2O35245 966 aa12.1□□□□□ -0.47
Vps39-201ENSMUST00000028752 Erich6bQ9D4S6 220 aa12.09□□□□□ -0.47
Vps39-201ENSMUST00000028752 Fmn1Q05860 1466 aa12.09□□□□□ -0.47
Vps39-201ENSMUST00000028752 Iqcf3Q9D498 203 aa12.08□□□□□ -0.48
Vps39-201ENSMUST00000028752 Fgd1P52734 960 aa12.08□□□□□ -0.48
Vps39-201ENSMUST00000028752 Gm6268A2A3U9 297 aa12.08□□□□□ -0.48
Vps39-201ENSMUST00000028752 Rundc1Q0VDN7 615 aa12.08□□□□□ -0.48
Vps39-201ENSMUST00000028752 Fhad1A6PWD2 1420 aa12.07□□□□□ -0.48
Vps39-201ENSMUST00000028752 Arhgap35Q91YM2 1499 aa12.05□□□□□ -0.48
Vps39-201ENSMUST00000028752 4933402E13RikQ9D4D2 429 aa12.05□□□□□ -0.48
Vps39-201ENSMUST00000028752 Smarca2Q6DIC0 1577 aa12.05□□□□□ -0.48
Vps39-201ENSMUST00000028752 Mphosph9A6H5Y1 991 aa12.05□□□□□ -0.48
Vps39-201ENSMUST00000028752 NudcO35685 332 aaKnown RBP12.05□□□□□ -0.48
Vps39-201ENSMUST00000028752 Mapk8ip3Q9ESN9 1337 aa12.04□□□□□ -0.48
Vps39-201ENSMUST00000028752 Fkbp15Q6P9Q6 1216 aaKnown RBP12.04□□□□□ -0.48
Vps39-201ENSMUST00000028752 SlkO54988 1233 aa12.03□□□□□ -0.48
Vps39-201ENSMUST00000028752 Rpap1Q80TE0 1409 aa12.03□□□□□ -0.48
Vps39-201ENSMUST00000028752 Clstn2Q9ER65 966 aa12.02□□□□□ -0.48
Vps39-201ENSMUST00000028752 Map7O88735 730 aa12.02□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 33.2 ms