RNA–Protein interactions for RNA: ENSMUST00000022623.12

Trim35-201, Transcript of Tripartite motif-containing protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim35, Length 3,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35-201ENSMUST00000022623 NclP09405 707 aaKnown RBP17.05■□□□□ 0.32
Trim35-201ENSMUST00000022623 Mapk8ip2Q9ERE9 830 aa17.03■□□□□ 0.32
Trim35-201ENSMUST00000022623 NrkQ9R0G8 1455 aa17.02■□□□□ 0.32
Trim35-201ENSMUST00000022623 Aebp1Q640N1 1128 aa17■□□□□ 0.31
Trim35-201ENSMUST00000022623 Arap1Q4LDD4 1452 aa16.99■□□□□ 0.31
Trim35-201ENSMUST00000022623 TnnQ80Z71 1560 aa16.98■□□□□ 0.31
Trim35-201ENSMUST00000022623 Duox2A2AQ99 1517 aa16.98■□□□□ 0.31
Trim35-201ENSMUST00000022623 Rad54l2Q99NG0 1466 aa16.98■□□□□ 0.31
Trim35-201ENSMUST00000022623 Carmil1Q6EDY6 1374 aa16.97■□□□□ 0.31
Trim35-201ENSMUST00000022623 PrkcshO08795 521 aa16.96■□□□□ 0.31
Trim35-201ENSMUST00000022623 ClspnQ80YR7 1315 aa16.95■□□□□ 0.3
Trim35-201ENSMUST00000022623 Efcab5A0JP43 1406 aa16.95■□□□□ 0.3
Trim35-201ENSMUST00000022623 Arhgap27A2AB59 869 aa16.95■□□□□ 0.3
Trim35-201ENSMUST00000022623 Mroh2bQ7M6Y6 1581 aa16.94■□□□□ 0.3
Trim35-201ENSMUST00000022623 Zbtb7cQ8VCZ7 619 aa16.93■□□□□ 0.3
Trim35-201ENSMUST00000022623 PogzQ8BZH4 1409 aaKnown RBP16.93■□□□□ 0.3
Trim35-201ENSMUST00000022623 Nop58Q6DFW4 536 aaKnown RBP16.92■□□□□ 0.3
Trim35-201ENSMUST00000022623 Ifnlr1Q8CGK5 535 aa16.9■□□□□ 0.3
Trim35-201ENSMUST00000022623 Cdk11bP24788 784 aaKnown RBP16.89■□□□□ 0.29
Trim35-201ENSMUST00000022623 Rpap1Q80TE0 1409 aa16.88■□□□□ 0.29
Trim35-201ENSMUST00000022623 Map3k1P53349 1493 aa16.83■□□□□ 0.29
Trim35-201ENSMUST00000022623 CntlnA2AM05 1397 aa16.83■□□□□ 0.28
Trim35-201ENSMUST00000022623 Naip1Q9QWK5 1403 aa16.83■□□□□ 0.28
Trim35-201ENSMUST00000022623 Thoc2B1AZI6 1594 aaKnown RBP16.83■□□□□ 0.28
Trim35-201ENSMUST00000022623 Unc13aQ4KUS2 1712 aa16.82■□□□□ 0.28
Trim35-201ENSMUST00000022623 Kif27Q7M6Z4 1394 aa16.81■□□□□ 0.28
Trim35-201ENSMUST00000022623 AqrQ8CFQ3 1481 aaKnown RBP16.81■□□□□ 0.28
Trim35-201ENSMUST00000022623 Arhgef5E9Q7D5 1581 aa16.8■□□□□ 0.28
Trim35-201ENSMUST00000022623 Mrc2Q64449 1479 aa16.8■□□□□ 0.28
Trim35-201ENSMUST00000022623 Slc24a1Q91WD8 1130 aa16.8■□□□□ 0.28
Trim35-201ENSMUST00000022623 Fyco1Q8VDC1 1437 aa16.77■□□□□ 0.27
Trim35-201ENSMUST00000022623 Hspa5P20029 655 aaKnown RBP16.76■□□□□ 0.27
Trim35-201ENSMUST00000022623 Cux1P53564 1515 aa16.75■□□□□ 0.27
Trim35-201ENSMUST00000022623 Ncapd3Q6ZQK0 1506 aa16.75■□□□□ 0.27
Trim35-201ENSMUST00000022623 Plb1Q3TTY0 1478 aa16.73■□□□□ 0.27
Trim35-201ENSMUST00000022623 Urb2E9Q7L1 1524 aaKnown RBP16.73■□□□□ 0.27
Trim35-201ENSMUST00000022623 Fam135aQ6NS59 1506 aa16.73■□□□□ 0.27
Trim35-201ENSMUST00000022623 Eif4g1Q6NZJ6 1600 aaKnown RBP16.7■□□□□ 0.26
Trim35-201ENSMUST00000022623 Ccer2J3QPU5 274 aa16.69■□□□□ 0.26
Trim35-201ENSMUST00000022623 Ccnb3Q810T2 1396 aa16.69■□□□□ 0.26
Trim35-201ENSMUST00000022623 Tiam1Q60610 1591 aa16.69■□□□□ 0.26
Trim35-201ENSMUST00000022623 Pcf11G3X9Z4 1553 aa16.67■□□□□ 0.26
Trim35-201ENSMUST00000022623 Ankrd26Q811D2 1581 aa16.67■□□□□ 0.26
Trim35-201ENSMUST00000022623 WrnO09053 1401 aa16.67■□□□□ 0.26
Trim35-201ENSMUST00000022623 Cabp1Q9JLK7 227 aa16.66■□□□□ 0.26
Trim35-201ENSMUST00000022623 Crocc2F6XLV1 1638 aa16.66■□□□□ 0.26
Trim35-201ENSMUST00000022623 Hnrnpul2Q00PI9 745 aaKnown RBP16.65■□□□□ 0.26
Trim35-201ENSMUST00000022623 SynmQ70IV5 1561 aa16.65■□□□□ 0.26
Trim35-201ENSMUST00000022623 Csrnp3P59055 597 aa16.65■□□□□ 0.26
Trim35-201ENSMUST00000022623 Samd9lQ69Z37 1561 aa16.65■□□□□ 0.26
Trim35-201ENSMUST00000022623 EprsQ8CGC7 1512 aaKnown RBP16.64■□□□□ 0.25
Trim35-201ENSMUST00000022623 CadpsQ80TJ1 1355 aa16.62■□□□□ 0.25
Trim35-201ENSMUST00000022623 Pelp1Q9DBD5 1123 aaKnown RBP16.62■□□□□ 0.25
Trim35-201ENSMUST00000022623 Zbtb4Q5F293 982 aa16.61■□□□□ 0.25
Trim35-201ENSMUST00000022623 Mia2Q91ZV0 1396 aa16.61■□□□□ 0.25
Trim35-201ENSMUST00000022623 Slx4Q6P1D7 1565 aa16.6■□□□□ 0.25
Trim35-201ENSMUST00000022623 AknaQ80VW7 1404 aa16.6■□□□□ 0.25
Trim35-201ENSMUST00000022623 Gm7298A0A0N4SVU1 1476 aa16.59■□□□□ 0.25
Trim35-201ENSMUST00000022623 Aplp2Q06335 707 aa16.59■□□□□ 0.25
Trim35-201ENSMUST00000022623 Kif21aQ9QXL2 1672 aa16.56■□□□□ 0.24
Trim35-201ENSMUST00000022623 Grin2aP35436 1464 aa16.55■□□□□ 0.24
Trim35-201ENSMUST00000022623 Polr1aO35134 1717 aaKnown RBP16.54■□□□□ 0.24
Trim35-201ENSMUST00000022623 Mtus2Q3UHD3 1353 aa16.53■□□□□ 0.24
Trim35-201ENSMUST00000022623 Sin3aQ60520 1274 aaKnown RBP16.52■□□□□ 0.23
Trim35-201ENSMUST00000022623 Anks4bQ8K3X6 423 aa16.51■□□□□ 0.23
Trim35-201ENSMUST00000022623 Rgl3Q3UYI5 709 aa16.5■□□□□ 0.23
Trim35-201ENSMUST00000022623 Mphosph9A6H5Y1 991 aa16.49■□□□□ 0.23
Trim35-201ENSMUST00000022623 3425401B19RikD3Z1D3 1412 aa16.49■□□□□ 0.23
Trim35-201ENSMUST00000022623 Pla2r1Q62028 1487 aa16.49■□□□□ 0.23
Trim35-201ENSMUST00000022623 Zfp644E9QA22 1323 aa16.48■□□□□ 0.23
Trim35-201ENSMUST00000022623 Disp1Q3TDN0 1521 aa16.47■□□□□ 0.23
Trim35-201ENSMUST00000022623 Pkd2O35245 966 aa16.46■□□□□ 0.23
Trim35-201ENSMUST00000022623 Erich6D3Z6S9 713 aa16.46■□□□□ 0.22
Trim35-201ENSMUST00000022623 Gpatch8A2A6A1 1505 aa16.44■□□□□ 0.22
Trim35-201ENSMUST00000022623 Gm1043A0A140LJC2 1431 aa16.44■□□□□ 0.22
Trim35-201ENSMUST00000022623 Rrp7aQ9D1C9 280 aaKnown RBP16.44■□□□□ 0.22
Trim35-201ENSMUST00000022623 PxdnQ3UQ28 1475 aa16.43■□□□□ 0.22
Trim35-201ENSMUST00000022623 Ift140E9PY46 1464 aa16.42■□□□□ 0.22
Trim35-201ENSMUST00000022623 Fhad1A6PWD2 1420 aa16.42■□□□□ 0.22
Trim35-201ENSMUST00000022623 Gm38655A0A286YDK6 273 aa16.41■□□□□ 0.22
Trim35-201ENSMUST00000022623 Grwd1Q810D6 446 aaKnown RBP16.41■□□□□ 0.22
Trim35-201ENSMUST00000022623 Magi3Q9EQJ9 1476 aa16.41■□□□□ 0.22
Trim35-201ENSMUST00000022623 Jph4Q80WT0 628 aa16.4■□□□□ 0.22
Trim35-201ENSMUST00000022623 Arhgap31A6X8Z5 1425 aa16.4■□□□□ 0.22
Trim35-201ENSMUST00000022623 Stra8P70278 393 aa16.4■□□□□ 0.22
Trim35-201ENSMUST00000022623 Trak1Q6PD31 939 aa16.39■□□□□ 0.21
Trim35-201ENSMUST00000022623 Erich3F6QRE9 1637 aa16.39■□□□□ 0.21
Trim35-201ENSMUST00000022623 Tdrd9Q14BI7 1383 aa16.39■□□□□ 0.21
Trim35-201ENSMUST00000022623 WizO88286 1684 aaKnown RBP16.38■□□□□ 0.21
Trim35-201ENSMUST00000022623 A2mQ6GQT1 1474 aa16.38■□□□□ 0.21
Trim35-201ENSMUST00000022623 Os9Q8K2C7 672 aa16.38■□□□□ 0.21
Trim35-201ENSMUST00000022623 Plekhh2Q8C115 1491 aa16.38■□□□□ 0.21
Trim35-201ENSMUST00000022623 Eif5bQ05D44 1216 aaKnown RBP16.38■□□□□ 0.21
Trim35-201ENSMUST00000022623 Cc2d2bA0A286YDU8 1405 aa16.37■□□□□ 0.21
Trim35-201ENSMUST00000022623 NexmifQ5DTT1 1515 aa16.36■□□□□ 0.21
Trim35-201ENSMUST00000022623 Arid3cA6PWV5 409 aa16.36■□□□□ 0.21
Trim35-201ENSMUST00000022623 Vps8Q0P5W1 1427 aa16.35■□□□□ 0.21
Trim35-201ENSMUST00000022623 UacaQ8CGB3 1411 aa16.34■□□□□ 0.21
Trim35-201ENSMUST00000022623 Naip2Q9QUK4 1447 aa16.34■□□□□ 0.21
Trim35-201ENSMUST00000022623 Lmo7E9PYF4 1699 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 68.2 ms