RNA–Protein interactions for RNA: ENSMUST00000021706.10

Traf3-201, Transcript of TNF receptor-associated factor 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf3, Length 7,060 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf3-201ENSMUST00000021706 4933416C03RikQ3V063 378 aa14.23□□□□□ -0.13
Traf3-201ENSMUST00000021706 Atp1b4Q99ME6 356 aa14.23□□□□□ -0.13
Traf3-201ENSMUST00000021706 Plppr3Q7TPB0 716 aa14.22□□□□□ -0.13
Traf3-201ENSMUST00000021706 4930567H17RikQ3V0K5 233 aa14.22□□□□□ -0.13
Traf3-201ENSMUST00000021706 Smarca4Q3TKT4 1613 aaKnown RBP14.21□□□□□ -0.13
Traf3-201ENSMUST00000021706 Gm13697A2AK42 830 aa14.18□□□□□ -0.14
Traf3-201ENSMUST00000021706 Rapgef2Q8CHG7 1496 aa14.17□□□□□ -0.14
Traf3-201ENSMUST00000021706 Atad2bE9Q166 1460 aaKnown RBP14.16□□□□□ -0.14
Traf3-201ENSMUST00000021706 Polr3glQ8R0C0 218 aa14.14□□□□□ -0.15
Traf3-201ENSMUST00000021706 Cttnbp2B9EJA2 1648 aa14.13□□□□□ -0.15
Traf3-201ENSMUST00000021706 Rangap1P46061 589 aaKnown RBP14.13□□□□□ -0.15
Traf3-201ENSMUST00000021706 Rad21Q61550 635 aaKnown RBP14.12□□□□□ -0.15
Traf3-201ENSMUST00000021706 Mrs2Q5NCE8 434 aa14.12□□□□□ -0.15
Traf3-201ENSMUST00000021706 Nlrp6Q91WS2 869 aa14.11□□□□□ -0.15
Traf3-201ENSMUST00000021706 Rgl3Q3UYI5 709 aa14.11□□□□□ -0.15
Traf3-201ENSMUST00000021706 Anp32aO35381 247 aa14.1□□□□□ -0.15
Traf3-201ENSMUST00000021706 Arhgap27A2AB59 869 aa14.1□□□□□ -0.15
Traf3-201ENSMUST00000021706 ArxO35085 564 aa14.09□□□□□ -0.15
Traf3-201ENSMUST00000021706 Cux2P70298 1426 aa14.08□□□□□ -0.16
Traf3-201ENSMUST00000021706 Ccer2J3QPU5 274 aa14.08□□□□□ -0.16
Traf3-201ENSMUST00000021706 Iqgap2Q3UQ44 1575 aa14.07□□□□□ -0.16
Traf3-201ENSMUST00000021706 P3h3Q8CG70 732 aa14.07□□□□□ -0.16
Traf3-201ENSMUST00000021706 Ppp4r2Q0VGB7 417 aa14.05□□□□□ -0.16
Traf3-201ENSMUST00000021706 BicraF8VPZ9 1578 aa14.05□□□□□ -0.16
Traf3-201ENSMUST00000021706 Calr4Q3TQS0 420 aa14.05□□□□□ -0.16
Traf3-201ENSMUST00000021706 Grwd1Q810D6 446 aaKnown RBP14.04□□□□□ -0.16
Traf3-201ENSMUST00000021706 Hspa5P20029 655 aaKnown RBP14.02□□□□□ -0.16
Traf3-201ENSMUST00000021706 Baz1bQ9Z277 1479 aa14.02□□□□□ -0.17
Traf3-201ENSMUST00000021706 Cc2d2aQ8CFW7 1633 aa14.01□□□□□ -0.17
Traf3-201ENSMUST00000021706 1700123L14RikQ3V2K7 440 aa14.01□□□□□ -0.17
Traf3-201ENSMUST00000021706 Aebp1Q640N1 1128 aa13.99□□□□□ -0.17
Traf3-201ENSMUST00000021706 Phldb1Q6PDH0 1371 aaKnown RBP13.98□□□□□ -0.17
Traf3-201ENSMUST00000021706 Gm13695A2AK44 830 aa13.97□□□□□ -0.17
Traf3-201ENSMUST00000021706 Aplp2Q06335 707 aa13.96□□□□□ -0.17
Traf3-201ENSMUST00000021706 SafbD3YXK2 937 aaKnown RBP13.94□□□□□ -0.18
Traf3-201ENSMUST00000021706 Kdm2aP59997 1161 aa13.92□□□□□ -0.18
Traf3-201ENSMUST00000021706 Sin3aQ60520 1274 aaKnown RBP13.92□□□□□ -0.18
Traf3-201ENSMUST00000021706 DaxxO35613 739 aa13.91□□□□□ -0.18
Traf3-201ENSMUST00000021706 Kif27Q7M6Z4 1394 aa13.89□□□□□ -0.19
Traf3-201ENSMUST00000021706 Rpap1Q80TE0 1409 aa13.89□□□□□ -0.19
Traf3-201ENSMUST00000021706 LrpprcQ6PB66 1392 aaKnown RBP13.88□□□□□ -0.19
Traf3-201ENSMUST00000021706 Trim26Q99PN3 545 aa13.88□□□□□ -0.19
Traf3-201ENSMUST00000021706 Rrp7aQ9D1C9 280 aaKnown RBP13.86□□□□□ -0.19
Traf3-201ENSMUST00000021706 Wdr43Q6ZQL4 677 aaKnown RBP13.85□□□□□ -0.19
Traf3-201ENSMUST00000021706 Top2aQ01320 1528 aaKnown RBP13.84□□□□□ -0.19
Traf3-201ENSMUST00000021706 Fam71e1A1L3C1 212 aa13.83□□□□□ -0.2
Traf3-201ENSMUST00000021706 Wwc2Q6NXJ0 1187 aa13.83□□□□□ -0.2
Traf3-201ENSMUST00000021706 Dhx29Q6PGC1 1365 aaKnown RBP13.82□□□□□ -0.2
Traf3-201ENSMUST00000021706 Card11Q8CIS0 1159 aa13.82□□□□□ -0.2
Traf3-201ENSMUST00000021706 Carmil1Q6EDY6 1374 aa13.82□□□□□ -0.2
Traf3-201ENSMUST00000021706 Cabp1Q9JLK7 227 aa13.81□□□□□ -0.2
Traf3-201ENSMUST00000021706 Apbb1Q9QXJ1 710 aa13.81□□□□□ -0.2
Traf3-201ENSMUST00000021706 Mtus2Q3UHD3 1353 aa13.81□□□□□ -0.2
Traf3-201ENSMUST00000021706 Ofd1Q80Z25 1017 aa13.8□□□□□ -0.2
Traf3-201ENSMUST00000021706 CntlnA2AM05 1397 aa13.79□□□□□ -0.2
Traf3-201ENSMUST00000021706 Mia2Q91ZV0 1396 aa13.79□□□□□ -0.2
Traf3-201ENSMUST00000021706 Clstn2Q9ER65 966 aa13.79□□□□□ -0.2
Traf3-201ENSMUST00000021706 Frmpd1A2AKB4 1549 aa13.79□□□□□ -0.2
Traf3-201ENSMUST00000021706 Ecm2Q5FW85 670 aa13.78□□□□□ -0.2
Traf3-201ENSMUST00000021706 PtprkP35822 1457 aa13.78□□□□□ -0.2
Traf3-201ENSMUST00000021706 Fyco1Q8VDC1 1437 aa13.77□□□□□ -0.2
Traf3-201ENSMUST00000021706 Mroh3A0A1D5RM54 893 aa13.77□□□□□ -0.21
Traf3-201ENSMUST00000021706 Stk24Q99KH8 431 aa13.75□□□□□ -0.21
Traf3-201ENSMUST00000021706 Arhgap35Q91YM2 1499 aa13.75□□□□□ -0.21
Traf3-201ENSMUST00000021706 Pkd2O35245 966 aa13.74□□□□□ -0.21
Traf3-201ENSMUST00000021706 AknaQ80VW7 1404 aa13.74□□□□□ -0.21
Traf3-201ENSMUST00000021706 Top2bQ64511 1612 aa13.74□□□□□ -0.21
Traf3-201ENSMUST00000021706 Neurod2Q62414 383 aa13.74□□□□□ -0.21
Traf3-201ENSMUST00000021706 Slc4a3P16283 1227 aa13.73□□□□□ -0.21
Traf3-201ENSMUST00000021706 Shroom4Q1W617 1475 aa13.73□□□□□ -0.21
Traf3-201ENSMUST00000021706 Cnga1P29974 684 aa13.72□□□□□ -0.21
Traf3-201ENSMUST00000021706 Rad54l2Q99NG0 1466 aa13.71□□□□□ -0.21
Traf3-201ENSMUST00000021706 Ccnb3Q810T2 1396 aa13.71□□□□□ -0.22
Traf3-201ENSMUST00000021706 Hdac5Q9Z2V6 1113 aa13.71□□□□□ -0.22
Traf3-201ENSMUST00000021706 Mphosph9A6H5Y1 991 aa13.7□□□□□ -0.22
Traf3-201ENSMUST00000021706 Trak1Q6PD31 939 aa13.7□□□□□ -0.22
Traf3-201ENSMUST00000021706 Gm20521D3Z5F7 333 aa13.69□□□□□ -0.22
Traf3-201ENSMUST00000021706 Rundc1Q0VDN7 615 aa13.68□□□□□ -0.22
Traf3-201ENSMUST00000021706 Arid3cA6PWV5 409 aa13.67□□□□□ -0.22
Traf3-201ENSMUST00000021706 Srpk2O54781 681 aaKnown RBP13.66□□□□□ -0.22
Traf3-201ENSMUST00000021706 Map4P27546 1125 aaKnown RBP13.66□□□□□ -0.22
Traf3-201ENSMUST00000021706 Irx6Q9ER75 438 aa13.66□□□□□ -0.22
Traf3-201ENSMUST00000021706 Arap1Q4LDD4 1452 aa13.65□□□□□ -0.22
Traf3-201ENSMUST00000021706 Exoc6Q8R313 802 aa13.65□□□□□ -0.22
Traf3-201ENSMUST00000021706 Safb2Q80YR5 991 aaKnown RBP13.65□□□□□ -0.22
Traf3-201ENSMUST00000021706 Dbr1Q923B1 550 aa13.65□□□□□ -0.22
Traf3-201ENSMUST00000021706 Efcab5A0JP43 1406 aa13.64□□□□□ -0.23
Traf3-201ENSMUST00000021706 Duox2A2AQ99 1517 aa13.63□□□□□ -0.23
Traf3-201ENSMUST00000021706 WrnO09053 1401 aa13.63□□□□□ -0.23
Traf3-201ENSMUST00000021706 Grin2bQ01097 1482 aa13.62□□□□□ -0.23
Traf3-201ENSMUST00000021706 Upf2A2AT37 1269 aaKnown RBP13.61□□□□□ -0.23
Traf3-201ENSMUST00000021706 Arid4bA2CG63 1314 aaKnown RBP13.61□□□□□ -0.23
Traf3-201ENSMUST00000021706 Armcx1Q9CX83 456 aa13.61□□□□□ -0.23
Traf3-201ENSMUST00000021706 Ifit1bl1D3Z6F0 470 aa13.6□□□□□ -0.23
Traf3-201ENSMUST00000021706 NrkQ9R0G8 1455 aa13.6□□□□□ -0.23
Traf3-201ENSMUST00000021706 Wdr62Q3U3T8 1523 aa13.6□□□□□ -0.23
Traf3-201ENSMUST00000021706 Naip1Q9QWK5 1403 aa13.6□□□□□ -0.23
Traf3-201ENSMUST00000021706 Cwc22Q8C5N3 908 aaKnown RBP13.6□□□□□ -0.23
Traf3-201ENSMUST00000021706 B4galnt3Q6L8S8 986 aa13.59□□□□□ -0.23
Traf3-201ENSMUST00000021706 Trim30dE9PWL0 497 aa13.58□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 105.7 ms