RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 TonslQ6NZL6 1363 aa17.64■□□□□ 0.41
Ufd1-201ENSMUST00000005394 UbtfP25976 765 aaKnown RBP17.62■□□□□ 0.41
Ufd1-201ENSMUST00000005394 Disp1Q3TDN0 1521 aa17.6■□□□□ 0.41
Ufd1-201ENSMUST00000005394 Pelp1Q9DBD5 1123 aaKnown RBP17.6■□□□□ 0.41
Ufd1-201ENSMUST00000005394 Col17a1Q07563 1470 aa17.59■□□□□ 0.41
Ufd1-201ENSMUST00000005394 Top2aQ01320 1528 aaKnown RBP17.58■□□□□ 0.4
Ufd1-201ENSMUST00000005394 Cep162Q6ZQ06 1403 aa17.57■□□□□ 0.4
Ufd1-201ENSMUST00000005394 Samd9lQ69Z37 1561 aa17.55■□□□□ 0.4
Ufd1-201ENSMUST00000005394 Efcab5A0JP43 1406 aa17.54■□□□□ 0.4
Ufd1-201ENSMUST00000005394 Ncapd3Q6ZQK0 1506 aa17.54■□□□□ 0.4
Ufd1-201ENSMUST00000005394 Tnnt3Q9QZ47 272 aa17.53■□□□□ 0.4
Ufd1-201ENSMUST00000005394 Nup160Q9Z0W3 1402 aaKnown RBP17.51■□□□□ 0.39
Ufd1-201ENSMUST00000005394 Cc2d2bA0A286YDU8 1405 aa17.5■□□□□ 0.39
Ufd1-201ENSMUST00000005394 Setd1bQ8CFT2 1985 aa17.49■□□□□ 0.39
Ufd1-201ENSMUST00000005394 Eif4g1Q6NZJ6 1600 aaKnown RBP17.49■□□□□ 0.39
Ufd1-201ENSMUST00000005394 Rad54l2Q99NG0 1466 aa17.47■□□□□ 0.39
Ufd1-201ENSMUST00000005394 Pbrm1Q8BSQ9 1634 aaKnown RBP17.46■□□□□ 0.39
Ufd1-201ENSMUST00000005394 NrkQ9R0G8 1455 aa17.42■□□□□ 0.38
Ufd1-201ENSMUST00000005394 Grin2aP35436 1464 aa17.41■□□□□ 0.38
Ufd1-201ENSMUST00000005394 Magi3Q9EQJ9 1476 aa17.39■□□□□ 0.38
Ufd1-201ENSMUST00000005394 Kdm5bQ80Y84 1544 aa17.37■□□□□ 0.37
Ufd1-201ENSMUST00000005394 Zcchc11B2RX14 1644 aaKnown RBP17.37■□□□□ 0.37
Ufd1-201ENSMUST00000005394 AqrQ8CFQ3 1481 aaKnown RBP17.36■□□□□ 0.37
Ufd1-201ENSMUST00000005394 PtprkP35822 1457 aa17.35■□□□□ 0.37
Ufd1-201ENSMUST00000005394 Shroom4Q1W617 1475 aa17.34■□□□□ 0.37
Ufd1-201ENSMUST00000005394 Fgd6Q69ZL1 1399 aa17.34■□□□□ 0.37
Ufd1-201ENSMUST00000005394 Bcl11aQ9QYE3 773 aa17.33■□□□□ 0.37
Ufd1-201ENSMUST00000005394 Clip1Q922J3 1391 aa17.33■□□□□ 0.36
Ufd1-201ENSMUST00000005394 Pla2r1Q62028 1487 aa17.28■□□□□ 0.36
Ufd1-201ENSMUST00000005394 Gm38655A0A286YDK6 273 aa17.28■□□□□ 0.36
Ufd1-201ENSMUST00000005394 Fam71e1A1L3C1 212 aa17.28■□□□□ 0.36
Ufd1-201ENSMUST00000005394 SynmQ70IV5 1561 aa17.27■□□□□ 0.36
Ufd1-201ENSMUST00000005394 Ppargc1bQ8VHJ7 1014 aa17.27■□□□□ 0.36
Ufd1-201ENSMUST00000005394 Hnrnpul2Q00PI9 745 aaKnown RBP17.26■□□□□ 0.35
Ufd1-201ENSMUST00000005394 TchhA0A0B4J1F9 1599 aa17.26■□□□□ 0.35
Ufd1-201ENSMUST00000005394 AknaQ80VW7 1404 aa17.25■□□□□ 0.35
Ufd1-201ENSMUST00000005394 Adgrl3Q80TS3 1537 aa17.23■□□□□ 0.35
Ufd1-201ENSMUST00000005394 Gapvd1Q6PAR5 1458 aa17.22■□□□□ 0.35
Ufd1-201ENSMUST00000005394 Cep170Q6A065 1588 aa17.2■□□□□ 0.34
Ufd1-201ENSMUST00000005394 Gm156Q58A37 223 aa17.2■□□□□ 0.34
Ufd1-201ENSMUST00000005394 Gpatch8A2A6A1 1505 aa17.2■□□□□ 0.34
Ufd1-201ENSMUST00000005394 Rtl5Q5DTT4 599 aa17.19■□□□□ 0.34
Ufd1-201ENSMUST00000005394 Stra8P70278 393 aa17.18■□□□□ 0.34
Ufd1-201ENSMUST00000005394 Abcc1O35379 1528 aa17.17■□□□□ 0.34
Ufd1-201ENSMUST00000005394 Npm2Q80W85 207 aa17.17■□□□□ 0.34
Ufd1-201ENSMUST00000005394 Anp32aO35381 247 aa17.16■□□□□ 0.34
Ufd1-201ENSMUST00000005394 Myt1lP97500 1187 aa17.16■□□□□ 0.34
Ufd1-201ENSMUST00000005394 Ttbk1Q6PCN3 1308 aa17.16■□□□□ 0.34
Ufd1-201ENSMUST00000005394 CadpsQ80TJ1 1355 aa17.14■□□□□ 0.34
Ufd1-201ENSMUST00000005394 Arhgap27A2AB59 869 aa17.14■□□□□ 0.33
Ufd1-201ENSMUST00000005394 Znf710Q3U288 666 aa17.14■□□□□ 0.33
Ufd1-201ENSMUST00000005394 Plekhg3Q4VAC9 1341 aa17.13■□□□□ 0.33
Ufd1-201ENSMUST00000005394 Arhgef5E9Q7D5 1581 aa17.13■□□□□ 0.33
Ufd1-201ENSMUST00000005394 SafbD3YXK2 937 aaKnown RBP17.13■□□□□ 0.33
Ufd1-201ENSMUST00000005394 Arhgap35Q91YM2 1499 aa17.11■□□□□ 0.33
Ufd1-201ENSMUST00000005394 Ythdc2B2RR83 1445 aaKnown RBP17.11■□□□□ 0.33
Ufd1-201ENSMUST00000005394 Rpap1Q80TE0 1409 aa17.11■□□□□ 0.33
Ufd1-201ENSMUST00000005394 Eea1Q8BL66 1411 aa17.11■□□□□ 0.33
Ufd1-201ENSMUST00000005394 Mroh2bQ7M6Y6 1581 aa17.11■□□□□ 0.33
Ufd1-201ENSMUST00000005394 Arap1Q4LDD4 1452 aa17.11■□□□□ 0.33
Ufd1-201ENSMUST00000005394 Dnmt1P13864 1620 aaKnown RBP17.09■□□□□ 0.33
Ufd1-201ENSMUST00000005394 PtprtQ99M80 1454 aa17.09■□□□□ 0.33
Ufd1-201ENSMUST00000005394 WizO88286 1684 aaKnown RBP17.09■□□□□ 0.33
Ufd1-201ENSMUST00000005394 Soga1E1U8D0 1418 aa17.09■□□□□ 0.33
Ufd1-201ENSMUST00000005394 Pcdh10E9PXQ7 1057 aa17.08■□□□□ 0.33
Ufd1-201ENSMUST00000005394 PxdnQ3UQ28 1475 aa17.08■□□□□ 0.33
Ufd1-201ENSMUST00000005394 Abca16E9PWJ7 1678 aa17.08■□□□□ 0.32
Ufd1-201ENSMUST00000005394 EprsQ8CGC7 1512 aaKnown RBP17.08■□□□□ 0.32
Ufd1-201ENSMUST00000005394 Chd1P40201 1711 aa17.07■□□□□ 0.32
Ufd1-201ENSMUST00000005394 Abcc2Q8VI47 1543 aa17.07■□□□□ 0.32
Ufd1-201ENSMUST00000005394 Neo1P97798 1493 aa17.07■□□□□ 0.32
Ufd1-201ENSMUST00000005394 UacaQ8CGB3 1411 aa17.07■□□□□ 0.32
Ufd1-201ENSMUST00000005394 Adamts12Q811B3 1600 aa17.04■□□□□ 0.32
Ufd1-201ENSMUST00000005394 Map3k1P53349 1493 aa17.03■□□□□ 0.32
Ufd1-201ENSMUST00000005394 Mapk8ip2Q9ERE9 830 aa17.03■□□□□ 0.32
Ufd1-201ENSMUST00000005394 Map3k4O08648 1597 aa17.03■□□□□ 0.32
Ufd1-201ENSMUST00000005394 BC005561E9Q5E2 1589 aa17.02■□□□□ 0.32
Ufd1-201ENSMUST00000005394 Gm14025A2AP89 1413 aa17.01■□□□□ 0.31
Ufd1-201ENSMUST00000005394 Tiam1Q60610 1591 aa17.01■□□□□ 0.31
Ufd1-201ENSMUST00000005394 Carmil1Q6EDY6 1374 aa16.99■□□□□ 0.31
Ufd1-201ENSMUST00000005394 Camsap2Q8C1B1 1461 aa16.98■□□□□ 0.31
Ufd1-201ENSMUST00000005394 Pprc1Q6NZN1 1644 aa16.96■□□□□ 0.31
Ufd1-201ENSMUST00000005394 Ankrd36D3Z4K0 1415 aa16.95■□□□□ 0.3
Ufd1-201ENSMUST00000005394 Ap3b1Q9Z1T1 1105 aa16.95■□□□□ 0.3
Ufd1-201ENSMUST00000005394 Erich3F6QRE9 1637 aa16.94■□□□□ 0.3
Ufd1-201ENSMUST00000005394 Slx4Q6P1D7 1565 aa16.94■□□□□ 0.3
Ufd1-201ENSMUST00000005394 Gm13697A2AK42 830 aa16.93■□□□□ 0.3
Ufd1-201ENSMUST00000005394 Gm7298A0A0N4SVU1 1476 aa16.93■□□□□ 0.3
Ufd1-201ENSMUST00000005394 Eid3Q3V124 375 aa16.91■□□□□ 0.3
Ufd1-201ENSMUST00000005394 Jph4Q80WT0 628 aa16.91■□□□□ 0.3
Ufd1-201ENSMUST00000005394 Setd5Q5XJV7 1441 aa16.91■□□□□ 0.3
Ufd1-201ENSMUST00000005394 Setbp1Q9Z180 1582 aa16.91■□□□□ 0.3
Ufd1-201ENSMUST00000005394 Ifnlr1Q8CGK5 535 aa16.9■□□□□ 0.3
Ufd1-201ENSMUST00000005394 AI481877A2ALV5 1481 aa16.89■□□□□ 0.29
Ufd1-201ENSMUST00000005394 Ccer2J3QPU5 274 aa16.89■□□□□ 0.29
Ufd1-201ENSMUST00000005394 Calr4Q3TQS0 420 aa16.89■□□□□ 0.29
Ufd1-201ENSMUST00000005394 Naip1Q9QWK5 1403 aa16.88■□□□□ 0.29
Ufd1-201ENSMUST00000005394 Ppp1r18Q8BQ30 594 aa16.88■□□□□ 0.29
Ufd1-201ENSMUST00000005394 Fkbp15Q6P9Q6 1216 aaKnown RBP16.87■□□□□ 0.29
Ufd1-201ENSMUST00000005394 Arhgef12Q8R4H2 1543 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 58.9 ms