RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 RS1O15537 224 aa12.25□□□□□ -0.45
PHGDH-229ENST00000641891 SCGB2A2Q13296 93 aa12.25□□□□□ -0.45
PHGDH-229ENST00000641891 FAM104AQ969W3 186 aa12.25□□□□□ -0.45
PHGDH-229ENST00000641891 RNASE8Q8TDE3 154 aaKnown RBP12.25□□□□□ -0.45
PHGDH-229ENST00000641891 RHODO00212 210 aa12.24□□□□□ -0.45
PHGDH-229ENST00000641891 IGHV3-53P01767 116 aa12.24□□□□□ -0.45
PHGDH-229ENST00000641891 RNASE13Q5GAN3 156 aaKnown RBP12.24□□□□□ -0.45
PHGDH-229ENST00000641891 SCGB1D4Q6XE38 83 aa12.24□□□□□ -0.45
PHGDH-229ENST00000641891 NFE4Q86UQ8 179 aa12.24□□□□□ -0.45
PHGDH-229ENST00000641891 IL17DQ8TAD2 202 aa12.24□□□□□ -0.45
PHGDH-229ENST00000641891 TRGV1A0A0A0MS02 117 aa12.23□□□□□ -0.45
PHGDH-229ENST00000641891 A0A0J9YXV3 536 aa12.23□□□□□ -0.45
PHGDH-229ENST00000641891 K7EP34 96 aa12.23□□□□□ -0.45
PHGDH-229ENST00000641891 SAMD5Q5TGI4 173 aa12.23□□□□□ -0.45
PHGDH-229ENST00000641891 GIG44P09565 113 aaPredicted RBP12.23□□□□□ -0.45
PHGDH-229ENST00000641891 CHCHD7Q9BUK0 85 aa12.23□□□□□ -0.45
PHGDH-229ENST00000641891 VCX2Q9H322 139 aa12.23□□□□□ -0.45
PHGDH-229ENST00000641891 FASNP49327 2511 aaKnown RBP12.23□□□□□ -0.45
PHGDH-229ENST00000641891 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.22□□□□□ -0.45
PHGDH-229ENST00000641891 IGKV2-29A2NJV5 120 aaPredicted RBP12.22□□□□□ -0.45
PHGDH-229ENST00000641891 IGLV1-51P01701 117 aa12.22□□□□□ -0.45
PHGDH-229ENST00000641891 KRTAP10-3P60369 221 aa12.22□□□□□ -0.45
PHGDH-229ENST00000641891 C12orf74Q32Q52 190 aa12.22□□□□□ -0.45
PHGDH-229ENST00000641891 IGHV3-64A0A075B6Q5 118 aa12.22□□□□□ -0.45
PHGDH-229ENST00000641891 RPL35AP18077 110 aaKnown RBP12.22□□□□□ -0.45
PHGDH-229ENST00000641891 GAGE12BA1L429 117 aa12.21□□□□□ -0.45
PHGDH-229ENST00000641891 NDUFA7O95182 113 aa12.21□□□□□ -0.45
PHGDH-229ENST00000641891 ZNF22P17026 224 aaPredicted RBP12.21□□□□□ -0.45
PHGDH-229ENST00000641891 GTF2H5Q6ZYL4 71 aa12.21□□□□□ -0.45
PHGDH-229ENST00000641891 C19orf73Q9NVV2 129 aa12.21□□□□□ -0.45
PHGDH-229ENST00000641891 SPCS1Q9Y6A9 102 aa12.21□□□□□ -0.45
PHGDH-229ENST00000641891 SETXQ7Z333 2677 aaKnown RBP12.21□□□□□ -0.46
PHGDH-229ENST00000641891 Q6ZTI0 123 aa12.2□□□□□ -0.46
PHGDH-229ENST00000641891 ZNF479Q96JC4 524 aa12.2□□□□□ -0.46
PHGDH-229ENST00000641891 PYGO1Q9Y3Y4 419 aa12.2□□□□□ -0.46
PHGDH-229ENST00000641891 TMEM223A0PJW6 202 aa12.2□□□□□ -0.46
PHGDH-229ENST00000641891 LY6G6DO95868 133 aa12.2□□□□□ -0.46
PHGDH-229ENST00000641891 AMELXQ99217 191 aa12.2□□□□□ -0.46
PHGDH-229ENST00000641891 J3QQQ9 107 aa12.19□□□□□ -0.46
PHGDH-229ENST00000641891 FABP2P12104 132 aa12.19□□□□□ -0.46
PHGDH-229ENST00000641891 A0A0J9YY99 117 aa12.19□□□□□ -0.46
PHGDH-229ENST00000641891 UBE2D4Q9Y2X8 147 aa12.19□□□□□ -0.46
PHGDH-229ENST00000641891 IGLL5B9A064 214 aa12.18□□□□□ -0.46
PHGDH-229ENST00000641891 TMEM263Q8WUH6 116 aaKnown RBP12.18□□□□□ -0.46
PHGDH-229ENST00000641891 DNAJC30Q96LL9 226 aa12.18□□□□□ -0.46
PHGDH-229ENST00000641891 SRSF9Q13242 221 aaKnown RBP eCLIP12.18□□□□□ -0.46
PHGDH-229ENST00000641891 NOP10Q9NPE3 64 aaKnown RBP12.18□□□□□ -0.46
PHGDH-229ENST00000641891 GCN1Q92616 2671 aaKnown RBP12.17□□□□□ -0.46
PHGDH-229ENST00000641891 LGALS3P17931 250 aaKnown RBP12.17□□□□□ -0.46
PHGDH-229ENST00000641891 COTL1Q14019 142 aa12.17□□□□□ -0.46
PHGDH-229ENST00000641891 A0A1B0GWB2 263 aa12.16□□□□□ -0.46
PHGDH-229ENST00000641891 LEPROTO15243 131 aa12.16□□□□□ -0.46
PHGDH-229ENST00000641891 Q6ZUT4 128 aa12.16□□□□□ -0.46
PHGDH-229ENST00000641891 CMC4P56277 68 aaPredicted RBP12.16□□□□□ -0.46
PHGDH-229ENST00000641891 OR5A1Q8NGJ0 315 aa12.16□□□□□ -0.46
PHGDH-229ENST00000641891 PLAC8L1A1L4L8 177 aa12.15□□□□□ -0.47
PHGDH-229ENST00000641891 SPANXA1Q9NS26 97 aa12.15□□□□□ -0.47
PHGDH-229ENST00000641891 JMJD1CQ15652 2540 aa12.14□□□□□ -0.47
PHGDH-229ENST00000641891 MRPS36P82909 103 aaKnown RBP12.14□□□□□ -0.47
PHGDH-229ENST00000641891 HIVEP2P31629 2446 aa12.14□□□□□ -0.47
PHGDH-229ENST00000641891 FAM110AQ9BQ89 295 aa12.13□□□□□ -0.47
PHGDH-229ENST00000641891 HECTD1Q9ULT8 2610 aa12.13□□□□□ -0.47
PHGDH-229ENST00000641891 TRAV4A0A0B4J268 109 aa12.13□□□□□ -0.47
PHGDH-229ENST00000641891 K7EQD1 137 aa12.13□□□□□ -0.47
PHGDH-229ENST00000641891 CSNK1G2-AS1Q8NCQ2 148 aa12.13□□□□□ -0.47
PHGDH-229ENST00000641891 TRAV8-3A0A0A6YYJ7 113 aa12.12□□□□□ -0.47
PHGDH-229ENST00000641891 RRN3P1Q2M238 152 aa12.12□□□□□ -0.47
PHGDH-229ENST00000641891 NDUFA11Q86Y39 141 aa12.12□□□□□ -0.47
PHGDH-229ENST00000641891 SLC25A29Q8N8R3 303 aa12.12□□□□□ -0.47
PHGDH-229ENST00000641891 INAFM1C9JVW0 142 aa12.12□□□□□ -0.47
PHGDH-229ENST00000641891 IGHV3-30P01768 117 aa12.12□□□□□ -0.47
PHGDH-229ENST00000641891 PF4P02776 101 aa12.12□□□□□ -0.47
PHGDH-229ENST00000641891 IGHV3-30-5P0DP03 117 aa12.12□□□□□ -0.47
PHGDH-229ENST00000641891 CRYBA4P53673 196 aa12.12□□□□□ -0.47
PHGDH-229ENST00000641891 RBX1P62877 108 aa12.12□□□□□ -0.47
PHGDH-229ENST00000641891 OCIAD2Q56VL3 154 aa12.12□□□□□ -0.47
PHGDH-229ENST00000641891 GAGE7O76087 117 aa12.11□□□□□ -0.47
PHGDH-229ENST00000641891 GAGE12FP0CL80 117 aa12.11□□□□□ -0.47
PHGDH-229ENST00000641891 GAGE12GP0CL81 117 aa12.11□□□□□ -0.47
PHGDH-229ENST00000641891 GAGE12IP0CL82 117 aa12.11□□□□□ -0.47
PHGDH-229ENST00000641891 UBE2D1P51668 147 aa12.11□□□□□ -0.47
PHGDH-229ENST00000641891 DAZ2Q13117 558 aaKnown RBP12.11□□□□□ -0.47
PHGDH-229ENST00000641891 C16orf74Q96GX8 76 aa12.11□□□□□ -0.47
PHGDH-229ENST00000641891 SPANXB1Q9NS25 103 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-229ENST00000641891 GAGE12JA6NER3 117 aa12.11□□□□□ -0.47
PHGDH-229ENST00000641891 IGHV3-30-3P0DP02 117 aa12.11□□□□□ -0.47
PHGDH-229ENST00000641891 GAGE4Q13068 117 aa12.11□□□□□ -0.47
PHGDH-229ENST00000641891 GAGE5Q13069 117 aa12.11□□□□□ -0.47
PHGDH-229ENST00000641891 GAGE13Q4V321 117 aa12.11□□□□□ -0.47
PHGDH-229ENST00000641891 TIMM21Q9BVV7 248 aa12.11□□□□□ -0.47
PHGDH-229ENST00000641891 TMEM238LA0A1B0GVL6 79 aa12.1□□□□□ -0.47
PHGDH-229ENST00000641891 A6NJY4 79 aa12.1□□□□□ -0.47
PHGDH-229ENST00000641891 APOMO95445 188 aa12.1□□□□□ -0.47
PHGDH-229ENST00000641891 LINC00694P0DN24 101 aa12.1□□□□□ -0.47
PHGDH-229ENST00000641891 C10orf126Q8N4M7 172 aa12.1□□□□□ -0.47
PHGDH-229ENST00000641891 LINC00482Q8N8I6 264 aa12.1□□□□□ -0.47
PHGDH-229ENST00000641891 SPATA3Q8NHX4 192 aa12.1□□□□□ -0.47
PHGDH-229ENST00000641891 PGPEP1Q9NXJ5 209 aa12.1□□□□□ -0.47
PHGDH-229ENST00000641891 OTOGQ6ZRI0 2925 aa12.09□□□□□ -0.47
PHGDH-229ENST00000641891 RPL36AP83881 106 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms