RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ICOSQ9Y6W8 199 aa6.53□□□□□ -1.36
PHGDH-228ENST00000641847 UBR4Q5T4S7 5183 aa6.53□□□□□ -1.36
PHGDH-228ENST00000641847 LRP1BQ9NZR2 4599 aa6.52□□□□□ -1.37
PHGDH-228ENST00000641847 TRBV7-3A0A075B6L6 115 aa6.52□□□□□ -1.37
PHGDH-228ENST00000641847 C16orf90A8MZG2 172 aa6.52□□□□□ -1.37
PHGDH-228ENST00000641847 SUMO2P61956 95 aaKnown RBP6.52□□□□□ -1.37
PHGDH-228ENST00000641847 IQCJQ1A5X6 159 aa6.52□□□□□ -1.37
PHGDH-228ENST00000641847 NEGR1Q7Z3B1 354 aa6.52□□□□□ -1.37
PHGDH-228ENST00000641847 ZNRF2Q8NHG8 242 aa6.52□□□□□ -1.37
PHGDH-228ENST00000641847 C20orf78Q9BR46 151 aa6.52□□□□□ -1.37
PHGDH-228ENST00000641847 IGHV3-38A0A0C4DH36 116 aa6.51□□□□□ -1.37
PHGDH-228ENST00000641847 LOC389332A0A1B0GUA5 103 aa6.51□□□□□ -1.37
PHGDH-228ENST00000641847 SDHAF1A6NFY7 115 aa6.51□□□□□ -1.37
PHGDH-228ENST00000641847 C1orf196B1AJZ1 125 aa6.51□□□□□ -1.37
PHGDH-228ENST00000641847 H3BNG1 76 aa6.51□□□□□ -1.37
PHGDH-228ENST00000641847 NUDT3O95989 172 aa6.51□□□□□ -1.37
PHGDH-228ENST00000641847 UBE2D3P61077 147 aa6.51□□□□□ -1.37
PHGDH-228ENST00000641847 UBE2D2P62837 147 aa6.51□□□□□ -1.37
PHGDH-228ENST00000641847 Q8N1X5 172 aa6.51□□□□□ -1.37
PHGDH-228ENST00000641847 C18orf32Q8TCD1 76 aa6.51□□□□□ -1.37
PHGDH-228ENST00000641847 TMEM70Q9BUB7 260 aa6.51□□□□□ -1.37
PHGDH-228ENST00000641847 SMIM2Q9BVW6 85 aa6.51□□□□□ -1.37
PHGDH-228ENST00000641847 APOBP04114 4563 aaKnown RBP6.5□□□□□ -1.37
PHGDH-228ENST00000641847 A0A096LPF7 62 aa6.5□□□□□ -1.37
PHGDH-228ENST00000641847 HIST1H2BKO60814 126 aa6.5□□□□□ -1.37
PHGDH-228ENST00000641847 HIST1H2BJP06899 126 aa6.5□□□□□ -1.37
PHGDH-228ENST00000641847 HIST1H2BOP23527 126 aa6.5□□□□□ -1.37
PHGDH-228ENST00000641847 HIST1H2BBP33778 126 aa6.5□□□□□ -1.37
PHGDH-228ENST00000641847 HIST1H2BDP58876 126 aa6.5□□□□□ -1.37
PHGDH-228ENST00000641847 HIST1H2BCP62807 126 aa6.5□□□□□ -1.37
PHGDH-228ENST00000641847 MRPL23Q16540 153 aaKnown RBP6.5□□□□□ -1.37
PHGDH-228ENST00000641847 HIST2H2BEQ16778 126 aa6.5□□□□□ -1.37
PHGDH-228ENST00000641847 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.5□□□□□ -1.37
PHGDH-228ENST00000641847 DAZ4Q86SG3 579 aaKnown RBP6.5□□□□□ -1.37
PHGDH-228ENST00000641847 C15orf53Q8NAA6 179 aa6.5□□□□□ -1.37
PHGDH-228ENST00000641847 HIST1H2BHQ93079 126 aa6.5□□□□□ -1.37
PHGDH-228ENST00000641847 HIST1H2BNQ99877 126 aa6.5□□□□□ -1.37
PHGDH-228ENST00000641847 HIST1H2BMQ99879 126 aa6.5□□□□□ -1.37
PHGDH-228ENST00000641847 DAZ3Q9NR90 486 aaKnown RBP6.5□□□□□ -1.37
PHGDH-228ENST00000641847 DNAH5Q8TE73 4624 aa6.5□□□□□ -1.37
PHGDH-228ENST00000641847 I3L3M4 83 aa6.49□□□□□ -1.37
PHGDH-228ENST00000641847 VCYO14598 125 aa6.49□□□□□ -1.37
PHGDH-228ENST00000641847 PMCHP20382 165 aa6.49□□□□□ -1.37
PHGDH-228ENST00000641847 IFI27P40305 119 aaPredicted RBP6.49□□□□□ -1.37
PHGDH-228ENST00000641847 POLR2KP53803 58 aaKnown RBP6.49□□□□□ -1.37
PHGDH-228ENST00000641847 RAB5BP61020 215 aa6.49□□□□□ -1.37
PHGDH-228ENST00000641847 RPL32P62910 135 aaKnown RBP6.49□□□□□ -1.37
PHGDH-228ENST00000641847 Q8N8P6 123 aa6.49□□□□□ -1.37
PHGDH-228ENST00000641847 ATP6V0E2Q8NHE4 81 aa6.49□□□□□ -1.37
PHGDH-228ENST00000641847 IGLV2-18A0A075B6J9 118 aa6.48□□□□□ -1.37
PHGDH-228ENST00000641847 TRBV27A0A0K0K1C4 114 aa6.48□□□□□ -1.37
PHGDH-228ENST00000641847 PRSS47A8MTI9 375 aa6.48□□□□□ -1.37
PHGDH-228ENST00000641847 TSHBP01222 138 aa6.48□□□□□ -1.37
PHGDH-228ENST00000641847 FCER1GP30273 86 aa6.48□□□□□ -1.37
PHGDH-228ENST00000641847 COTL1Q14019 142 aa6.48□□□□□ -1.37
PHGDH-228ENST00000641847 RNASEKQ6P5S7 137 aaKnown RBP6.48□□□□□ -1.37
PHGDH-228ENST00000641847 FA2HQ7L5A8 372 aa6.48□□□□□ -1.37
PHGDH-228ENST00000641847 SH2D6Q7Z4S9 175 aa6.48□□□□□ -1.37
PHGDH-228ENST00000641847 BAGE3Q86Y29 109 aa6.48□□□□□ -1.37
PHGDH-228ENST00000641847 PRSS3P2Q8NHM4 247 aa6.48□□□□□ -1.37
PHGDH-228ENST00000641847 DEFB104AQ8WTQ1 72 aa6.48□□□□□ -1.37
PHGDH-228ENST00000641847 KIR2DL4Q99706 377 aa6.48□□□□□ -1.37
PHGDH-228ENST00000641847 NXT2Q9NPJ8 142 aaKnown RBP6.48□□□□□ -1.37
PHGDH-228ENST00000641847 TCAPO15273 167 aa6.47□□□□□ -1.37
PHGDH-228ENST00000641847 Q0VG73 95 aa6.47□□□□□ -1.37
PHGDH-228ENST00000641847 C1orf134Q5TEV5 83 aa6.47□□□□□ -1.37
PHGDH-228ENST00000641847 UBE2DNLQ8IWF7 75 aa6.47□□□□□ -1.37
PHGDH-228ENST00000641847 URB1-AS1Q96HZ7 61 aa6.47□□□□□ -1.37
PHGDH-228ENST00000641847 AMTP48728 403 aa6.46□□□□□ -1.38
PHGDH-228ENST00000641847 TMEM97Q5BJF2 176 aa6.46□□□□□ -1.38
PHGDH-228ENST00000641847 NIT1Q86X76 327 aa6.46□□□□□ -1.38
PHGDH-228ENST00000641847 GTSF1LQ9H1H1 148 aa6.46□□□□□ -1.38
PHGDH-228ENST00000641847 TRBV25-1A0A075B6N4 114 aa6.45□□□□□ -1.38
PHGDH-228ENST00000641847 TRBV6-8A0A0A6YYG3 113 aa6.45□□□□□ -1.38
PHGDH-228ENST00000641847 IGHV1-24A0A0C4DH33 117 aa6.45□□□□□ -1.38
PHGDH-228ENST00000641847 K7EMI3 77 aa6.45□□□□□ -1.38
PHGDH-228ENST00000641847 SERF1AO75920 110 aa6.45□□□□□ -1.38
PHGDH-228ENST00000641847 LINC00614P0C842 121 aa6.45□□□□□ -1.38
PHGDH-228ENST00000641847 NDUFA6P56556 154 aa6.45□□□□□ -1.38
PHGDH-228ENST00000641847 LINC00310P59036 64 aa6.45□□□□□ -1.38
PHGDH-228ENST00000641847 LAGE3Q14657 143 aa6.45□□□□□ -1.38
PHGDH-228ENST00000641847 ORMDL2Q53FV1 153 aa6.45□□□□□ -1.38
PHGDH-228ENST00000641847 LYPD5Q6UWN5 251 aa6.45□□□□□ -1.38
PHGDH-228ENST00000641847 NTM-AS1Q6ZSK4 140 aa6.45□□□□□ -1.38
PHGDH-228ENST00000641847 CHCHD1Q96BP2 118 aaKnown RBP6.45□□□□□ -1.38
PHGDH-228ENST00000641847 AP5S1Q9NUS5 200 aa6.45□□□□□ -1.38
PHGDH-228ENST00000641847 MYCBP2O75592 4640 aa6.45□□□□□ -1.38
PHGDH-228ENST00000641847 LINC01546A6NGU7 62 aa6.44□□□□□ -1.38
PHGDH-228ENST00000641847 TIRAPP58753 221 aa6.44□□□□□ -1.38
PHGDH-228ENST00000641847 ESRGQ1W209 222 aa6.44□□□□□ -1.38
PHGDH-228ENST00000641847 LELP1Q5T871 98 aa6.44□□□□□ -1.38
PHGDH-228ENST00000641847 TMEM243Q9BU79 118 aa6.44□□□□□ -1.38
PHGDH-228ENST00000641847 CHCHD7Q9BUK0 85 aa6.44□□□□□ -1.38
PHGDH-228ENST00000641847 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.43□□□□□ -1.38
PHGDH-228ENST00000641847 IGKV2-29A2NJV5 120 aaPredicted RBP6.43□□□□□ -1.38
PHGDH-228ENST00000641847 EPM2AB3EWF7 344 aa6.43□□□□□ -1.38
PHGDH-228ENST00000641847 HSBP1O75506 76 aa6.43□□□□□ -1.38
PHGDH-228ENST00000641847 S100A6P06703 90 aa6.43□□□□□ -1.38
PHGDH-228ENST00000641847 ESDP10768 282 aa6.43□□□□□ -1.38
PHGDH-228ENST00000641847 CCL18P55774 89 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms