RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 RHODO00212 210 aa10.74□□□□□ -0.69
SCARB2-221ENST00000640341 POM121L12Q8N7R1 296 aa10.74□□□□□ -0.69
SCARB2-221ENST00000640341 C1QTNF4Q9BXJ3 329 aa10.74□□□□□ -0.69
SCARB2-221ENST00000640341 ACANP16112 2415 aa10.74□□□□□ -0.69
SCARB2-221ENST00000640341 A0A0U1RRA0 63 aa10.74□□□□□ -0.69
SCARB2-221ENST00000640341 C9JAW5 83 aa10.74□□□□□ -0.69
SCARB2-221ENST00000640341 LINC01356Q8N9X3 169 aa10.74□□□□□ -0.69
SCARB2-221ENST00000640341 LINC01587Q99440 93 aa10.72□□□□□ -0.69
SCARB2-221ENST00000640341 TRGV11A0A075B6L2 103 aa10.72□□□□□ -0.69
SCARB2-221ENST00000640341 TRBV6-5A0A0K0K1A5 114 aa10.72□□□□□ -0.69
SCARB2-221ENST00000640341 TMEM223A0PJW6 202 aa10.72□□□□□ -0.69
SCARB2-221ENST00000640341 LYRM7Q5U5X0 104 aa10.72□□□□□ -0.69
SCARB2-221ENST00000640341 A8MWV9 139 aa10.72□□□□□ -0.69
SCARB2-221ENST00000640341 CKS1BP61024 79 aa10.72□□□□□ -0.69
SCARB2-221ENST00000640341 CLUHP3Q96NS8 147 aa10.72□□□□□ -0.69
SCARB2-221ENST00000640341 BRI3O95415 125 aa10.71□□□□□ -0.69
SCARB2-221ENST00000640341 SPINK8P0C7L1 97 aa10.71□□□□□ -0.69
SCARB2-221ENST00000640341 DAND5Q8N907 189 aa10.71□□□□□ -0.69
SCARB2-221ENST00000640341 TIMM21Q9BVV7 248 aa10.71□□□□□ -0.69
SCARB2-221ENST00000640341 ERG28Q9UKR5 140 aa10.71□□□□□ -0.69
SCARB2-221ENST00000640341 A0A1W2PRX2 142 aa10.71□□□□□ -0.69
SCARB2-221ENST00000640341 RPL32P62910 135 aaKnown RBP10.71□□□□□ -0.69
SCARB2-221ENST00000640341 Q6ZSN1 163 aa10.71□□□□□ -0.69
SCARB2-221ENST00000640341 TMEM61Q8N0U2 210 aa10.71□□□□□ -0.69
SCARB2-221ENST00000640341 AMELXQ99217 191 aa10.71□□□□□ -0.69
SCARB2-221ENST00000640341 IGHV3-30-3P0DP02 117 aa10.71□□□□□ -0.7
SCARB2-221ENST00000640341 UBE2D3P61077 147 aa10.71□□□□□ -0.7
SCARB2-221ENST00000640341 UBE2D2P62837 147 aa10.71□□□□□ -0.7
SCARB2-221ENST00000640341 RHOHQ15669 191 aa10.71□□□□□ -0.7
SCARB2-221ENST00000640341 NSUN5P1Q3KNT7 163 aa10.71□□□□□ -0.7
SCARB2-221ENST00000640341 Q6ZSV7 163 aa10.71□□□□□ -0.7
SCARB2-221ENST00000640341 VPREB3Q9UKI3 123 aa10.71□□□□□ -0.7
SCARB2-221ENST00000640341 LEPROTO15243 131 aa10.7□□□□□ -0.7
SCARB2-221ENST00000640341 DYNLRB2Q8TF09 96 aa10.7□□□□□ -0.7
SCARB2-221ENST00000640341 ANKRD29Q8N6D5 301 aa10.7□□□□□ -0.7
SCARB2-221ENST00000640341 ZNF625Q96I27 306 aaPredicted RBP10.7□□□□□ -0.7
SCARB2-221ENST00000640341 UBE2E2Q96LR5 201 aa10.7□□□□□ -0.7
SCARB2-221ENST00000640341 XCL2Q9UBD3 114 aa10.7□□□□□ -0.7
SCARB2-221ENST00000640341 MT-ATP8P03928 68 aa10.69□□□□□ -0.7
SCARB2-221ENST00000640341 SPATA25Q9BR10 227 aa10.69□□□□□ -0.7
SCARB2-221ENST00000640341 IGHV3-53P01767 116 aa10.69□□□□□ -0.7
SCARB2-221ENST00000640341 FHL3Q13643 280 aa10.69□□□□□ -0.7
SCARB2-221ENST00000640341 ELANEP08246 267 aa10.68□□□□□ -0.7
SCARB2-221ENST00000640341 FN1P02751 2386 aaKnown RBP10.68□□□□□ -0.7
SCARB2-221ENST00000640341 DGAT2L7PQ6IED9 249 aa10.68□□□□□ -0.7
SCARB2-221ENST00000640341 A0A0J9YXY3 114 aa10.68□□□□□ -0.7
SCARB2-221ENST00000640341 RBMY1BA6NDE4 496 aaKnown RBP10.68□□□□□ -0.7
SCARB2-221ENST00000640341 RBMY1EA6NEQ0 496 aaKnown RBP10.68□□□□□ -0.7
SCARB2-221ENST00000640341 EIF4EBP3O60516 100 aaPredicted RBP10.68□□□□□ -0.7
SCARB2-221ENST00000640341 RBMY1DP0C7P1 496 aaKnown RBP10.68□□□□□ -0.7
SCARB2-221ENST00000640341 CARD19Q96LW7 228 aa10.68□□□□□ -0.7
SCARB2-221ENST00000640341 SLC25A20O43772 301 aa10.67□□□□□ -0.7
SCARB2-221ENST00000640341 TEN1Q86WV5 123 aa10.67□□□□□ -0.7
SCARB2-221ENST00000640341 GEMIN7Q9H840 131 aaKnown RBP10.67□□□□□ -0.7
SCARB2-221ENST00000640341 ZNF702PQ9H963 129 aa10.67□□□□□ -0.7
SCARB2-221ENST00000640341 GATA3P23771 443 aa10.67□□□□□ -0.7
SCARB2-221ENST00000640341 NDUFA12Q9UI09 145 aa10.67□□□□□ -0.7
SCARB2-221ENST00000640341 H3BMM0 161 aa10.67□□□□□ -0.7
SCARB2-221ENST00000640341 ODF3Q96PU9 254 aa10.67□□□□□ -0.7
SCARB2-221ENST00000640341 IGHV3-33P01772 117 aa10.66□□□□□ -0.7
SCARB2-221ENST00000640341 Q6ZUT4 128 aa10.66□□□□□ -0.7
SCARB2-221ENST00000640341 PPDPFLQ8WWR9 84 aa10.66□□□□□ -0.7
SCARB2-221ENST00000640341 TRBV20-1A0A075B6N2 111 aa10.66□□□□□ -0.7
SCARB2-221ENST00000640341 KRTAP10-9P60411 292 aa10.66□□□□□ -0.7
SCARB2-221ENST00000640341 XGP55808 180 aa10.65□□□□□ -0.7
SCARB2-221ENST00000640341 ADAMTSL4-AS1Q5T5F5 129 aa10.65□□□□□ -0.7
SCARB2-221ENST00000640341 LINC00467Q9BRT7 94 aa10.65□□□□□ -0.7
SCARB2-221ENST00000640341 CDIP1Q9H305 208 aa10.65□□□□□ -0.7
SCARB2-221ENST00000640341 M0R2P5 195 aa10.64□□□□□ -0.71
SCARB2-221ENST00000640341 ZNF469Q96JG9 3925 aaPredicted RBP10.64□□□□□ -0.71
SCARB2-221ENST00000640341 NTN5Q8WTR8 489 aaPredicted RBP10.64□□□□□ -0.71
SCARB2-221ENST00000640341 TMEM263Q8WUH6 116 aaKnown RBP10.64□□□□□ -0.71
SCARB2-221ENST00000640341 TRAV26-1A0A087WT03 109 aa10.64□□□□□ -0.71
SCARB2-221ENST00000640341 ZNF415Q09FC8 603 aa10.63□□□□□ -0.71
SCARB2-221ENST00000640341 NDUFA7O95182 113 aa10.63□□□□□ -0.71
SCARB2-221ENST00000640341 FLNAP21333 2647 aaKnown RBP10.62□□□□□ -0.71
SCARB2-221ENST00000640341 TRGV1A0A0A0MS02 117 aa10.62□□□□□ -0.71
SCARB2-221ENST00000640341 BBC3Q96PG8 261 aaPredicted RBP10.62□□□□□ -0.71
SCARB2-221ENST00000640341 TRAV13-1A0A0B4J241 112 aa10.62□□□□□ -0.71
SCARB2-221ENST00000640341 SCGB1A1P11684 91 aa10.62□□□□□ -0.71
SCARB2-221ENST00000640341 DSCR9P59020 149 aa10.62□□□□□ -0.71
SCARB2-221ENST00000640341 Q6YL49 198 aa10.62□□□□□ -0.71
SCARB2-221ENST00000640341 CDKN2A-AS1Q9UH64 79 aa10.62□□□□□ -0.71
SCARB2-221ENST00000640341 TRIAP1O43715 76 aa10.61□□□□□ -0.71
SCARB2-221ENST00000640341 MAP6D1Q9H9H5 199 aa10.61□□□□□ -0.71
SCARB2-221ENST00000640341 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.61□□□□□ -0.71
SCARB2-221ENST00000640341 IGKV3OR2-268A0A0C4DH90 116 aa10.61□□□□□ -0.71
SCARB2-221ENST00000640341 CLEC2BQ92478 149 aa10.61□□□□□ -0.71
SCARB2-221ENST00000640341 FAM104AQ969W3 186 aa10.61□□□□□ -0.71
SCARB2-221ENST00000640341 IGHV1-58A0A0C4DH39 117 aa10.6□□□□□ -0.71
SCARB2-221ENST00000640341 TEX49A0A1B0GTD5 131 aa10.6□□□□□ -0.71
SCARB2-221ENST00000640341 ATP6V0E2Q8NHE4 81 aa10.6□□□□□ -0.71
SCARB2-221ENST00000640341 CHCHD7Q9BUK0 85 aa10.6□□□□□ -0.71
SCARB2-221ENST00000640341 UBE2D4Q9Y2X8 147 aa10.6□□□□□ -0.71
SCARB2-221ENST00000640341 IGHV4-31P0DP07 118 aa10.59□□□□□ -0.71
SCARB2-221ENST00000640341 HIST2H2BCQ6DN03 193 aa10.59□□□□□ -0.71
SCARB2-221ENST00000640341 PEMTQ9UBM1 199 aa10.59□□□□□ -0.71
SCARB2-221ENST00000640341 ITPR3Q14573 2671 aa10.59□□□□□ -0.71
SCARB2-221ENST00000640341 MRPS36P82909 103 aaKnown RBP10.59□□□□□ -0.71
SCARB2-221ENST00000640341 CRYBA4P53673 196 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms