RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 PRRC2AP48634 2157 aaKnown RBP12.14□□□□□ -0.47
HNRNPU-228ENST00000640306 IGHV3-38A0A0C4DH36 116 aa12.14□□□□□ -0.47
HNRNPU-228ENST00000640306 A8MWV9 139 aa12.14□□□□□ -0.47
HNRNPU-228ENST00000640306 C9JAW5 83 aa12.14□□□□□ -0.47
HNRNPU-228ENST00000640306 ELANEP08246 267 aa12.14□□□□□ -0.47
HNRNPU-228ENST00000640306 SLURP1P55000 103 aa12.14□□□□□ -0.47
HNRNPU-228ENST00000640306 TCTEX1D4Q5JR98 221 aa12.14□□□□□ -0.47
HNRNPU-228ENST00000640306 LYRM7Q5U5X0 104 aa12.14□□□□□ -0.47
HNRNPU-228ENST00000640306 KRTAP10-9P60411 292 aa12.13□□□□□ -0.47
HNRNPU-228ENST00000640306 TEN1Q86WV5 123 aa12.13□□□□□ -0.47
HNRNPU-228ENST00000640306 TENM4Q6N022 2769 aa12.13□□□□□ -0.47
HNRNPU-228ENST00000640306 SPINK8P0C7L1 97 aa12.12□□□□□ -0.47
HNRNPU-228ENST00000640306 XGP55808 180 aa12.12□□□□□ -0.47
HNRNPU-228ENST00000640306 Q6ZSN1 163 aa12.12□□□□□ -0.47
HNRNPU-228ENST00000640306 IGHV3-33P01772 117 aa12.12□□□□□ -0.47
HNRNPU-228ENST00000640306 IGHV3-30-3P0DP02 117 aa12.12□□□□□ -0.47
HNRNPU-228ENST00000640306 ODF3Q96PU9 254 aa12.12□□□□□ -0.47
HNRNPU-228ENST00000640306 ERG28Q9UKR5 140 aa12.12□□□□□ -0.47
HNRNPU-228ENST00000640306 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.11□□□□□ -0.47
HNRNPU-228ENST00000640306 IGKV2-29A2NJV5 120 aaPredicted RBP12.11□□□□□ -0.47
HNRNPU-228ENST00000640306 KHDC1LQ5JSQ8 128 aa12.11□□□□□ -0.47
HNRNPU-228ENST00000640306 PPDPFLQ8WWR9 84 aa12.11□□□□□ -0.47
HNRNPU-228ENST00000640306 NAV2Q8IVL1 2488 aa12.11□□□□□ -0.47
HNRNPU-228ENST00000640306 A0A0J9YXY3 114 aa12.11□□□□□ -0.47
HNRNPU-228ENST00000640306 SCGB1A1P11684 91 aa12.11□□□□□ -0.47
HNRNPU-228ENST00000640306 Q6ZSV7 163 aa12.11□□□□□ -0.47
HNRNPU-228ENST00000640306 TRGV11A0A075B6L2 103 aa12.1□□□□□ -0.47
HNRNPU-228ENST00000640306 TRBV20-1A0A075B6N2 111 aa12.1□□□□□ -0.47
HNRNPU-228ENST00000640306 CKS1BP61024 79 aa12.1□□□□□ -0.47
HNRNPU-228ENST00000640306 HIST2H2BCQ6DN03 193 aa12.1□□□□□ -0.47
HNRNPU-228ENST00000640306 ATP6V0E2Q8NHE4 81 aa12.1□□□□□ -0.47
HNRNPU-228ENST00000640306 TMEM263Q8WUH6 116 aaKnown RBP12.1□□□□□ -0.47
HNRNPU-228ENST00000640306 TIMM21Q9BVV7 248 aa12.1□□□□□ -0.47
HNRNPU-228ENST00000640306 TNFRSF18Q9Y5U5 241 aa12.1□□□□□ -0.47
HNRNPU-228ENST00000640306 SLC25A20O43772 301 aa12.1□□□□□ -0.47
HNRNPU-228ENST00000640306 FAM104AQ969W3 186 aa12.1□□□□□ -0.47
HNRNPU-228ENST00000640306 NF1P21359 2839 aa12.1□□□□□ -0.47
HNRNPU-228ENST00000640306 RBMY1BA6NDE4 496 aaKnown RBP12.09□□□□□ -0.47
HNRNPU-228ENST00000640306 RBMY1EA6NEQ0 496 aaKnown RBP12.09□□□□□ -0.47
HNRNPU-228ENST00000640306 RBMY1DP0C7P1 496 aaKnown RBP12.09□□□□□ -0.47
HNRNPU-228ENST00000640306 NIPBLQ6KC79 2804 aaeCLIP12.09□□□□□ -0.472e-6■□□□□ 9
HNRNPU-228ENST00000640306 A0A1B0GV72 72 aa12.08□□□□□ -0.48
HNRNPU-228ENST00000640306 ADAMTSL4-AS1Q5T5F5 129 aa12.08□□□□□ -0.48
HNRNPU-228ENST00000640306 Q6ZUT4 128 aa12.08□□□□□ -0.48
HNRNPU-228ENST00000640306 CIDEAO60543 219 aa12.08□□□□□ -0.48
HNRNPU-228ENST00000640306 DAND5Q8N907 189 aa12.08□□□□□ -0.48
HNRNPU-228ENST00000640306 LINC01356Q8N9X3 169 aa12.07□□□□□ -0.48
HNRNPU-228ENST00000640306 KMT2BQ9UMN6 2715 aaPredicted RBP12.07□□□□□ -0.48
HNRNPU-228ENST00000640306 JMJD1CQ15652 2540 aa12.06□□□□□ -0.48
HNRNPU-228ENST00000640306 TMEM61Q8N0U2 210 aa12.06□□□□□ -0.48
HNRNPU-228ENST00000640306 IGHV3OR16-12A0A075B7B8 117 aa12.06□□□□□ -0.48
HNRNPU-228ENST00000640306 M0R2P5 195 aa12.06□□□□□ -0.48
HNRNPU-228ENST00000640306 CRYBA4P53673 196 aa12.06□□□□□ -0.48
HNRNPU-228ENST00000640306 ZNF702PQ9H963 129 aa12.06□□□□□ -0.48
HNRNPU-228ENST00000640306 NDUFA12Q9UI09 145 aa12.06□□□□□ -0.48
HNRNPU-228ENST00000640306 VPREB3Q9UKI3 123 aa12.06□□□□□ -0.48
HNRNPU-228ENST00000640306 HELZ2Q9BYK8 2649 aaKnown RBP12.05□□□□□ -0.48
HNRNPU-228ENST00000640306 H3BMM0 161 aa12.05□□□□□ -0.48
HNRNPU-228ENST00000640306 LINC01587Q99440 93 aa12.05□□□□□ -0.48
HNRNPU-228ENST00000640306 A0A0U1RRA0 63 aa12.04□□□□□ -0.48
HNRNPU-228ENST00000640306 NTN5Q8WTR8 489 aaPredicted RBP12.04□□□□□ -0.48
HNRNPU-228ENST00000640306 LINC00467Q9BRT7 94 aa12.04□□□□□ -0.48
HNRNPU-228ENST00000640306 CCDC168Q8NDH2 2452 aa12.04□□□□□ -0.48
HNRNPU-228ENST00000640306 TRIAP1O43715 76 aa12.04□□□□□ -0.48
HNRNPU-228ENST00000640306 Q5PR19 223 aa12.04□□□□□ -0.48
HNRNPU-228ENST00000640306 UBE2E2Q96LR5 201 aa12.04□□□□□ -0.48
HNRNPU-228ENST00000640306 LITAFQ99732 161 aa12.04□□□□□ -0.48
HNRNPU-228ENST00000640306 A0A0B4J2C4 111 aa12.03□□□□□ -0.48
HNRNPU-228ENST00000640306 MRPS36P82909 103 aaKnown RBP12.03□□□□□ -0.48
HNRNPU-228ENST00000640306 SBSPONQ8IVN8 264 aa12.03□□□□□ -0.48
HNRNPU-228ENST00000640306 APCP25054 2843 aa12.03□□□□□ -0.48
HNRNPU-228ENST00000640306 GATA3P23771 443 aa12.03□□□□□ -0.48
HNRNPU-228ENST00000640306 CHCHD7Q9BUK0 85 aa12.03□□□□□ -0.48
HNRNPU-228ENST00000640306 GEMIN7Q9H840 131 aaKnown RBP12.03□□□□□ -0.48
HNRNPU-228ENST00000640306 AKAP9Q99996 3911 aa12.02□□□□□ -0.48
HNRNPU-228ENST00000640306 C11orf44Q8N8P7 122 aa12.02□□□□□ -0.48
HNRNPU-228ENST00000640306 ZNF625Q96I27 306 aaPredicted RBP12.02□□□□□ -0.48
HNRNPU-228ENST00000640306 ZNF469Q96JG9 3925 aaPredicted RBP12.02□□□□□ -0.48
HNRNPU-228ENST00000640306 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.02□□□□□ -0.49
HNRNPU-228ENST00000640306 IGHV1-58A0A0C4DH39 117 aa12.02□□□□□ -0.49
HNRNPU-228ENST00000640306 TEX49A0A1B0GTD5 131 aa12.01□□□□□ -0.49
HNRNPU-228ENST00000640306 UBE2D4Q9Y2X8 147 aa12.01□□□□□ -0.49
HNRNPU-228ENST00000640306 LINC01620Q4KN68 170 aa12.01□□□□□ -0.49
HNRNPU-228ENST00000640306 XCL2Q9UBD3 114 aa12.01□□□□□ -0.49
HNRNPU-228ENST00000640306 PYGO1Q9Y3Y4 419 aa12□□□□□ -0.49
HNRNPU-228ENST00000640306 CLEC2BQ92478 149 aa12□□□□□ -0.49
HNRNPU-228ENST00000640306 CDKN2A-AS1Q9UH64 79 aa12□□□□□ -0.49
HNRNPU-228ENST00000640306 ZNF415Q09FC8 603 aa12□□□□□ -0.49
HNRNPU-228ENST00000640306 VSIG2Q96IQ7 327 aa12□□□□□ -0.49
HNRNPU-228ENST00000640306 TRAV26-1A0A087WT03 109 aa11.99□□□□□ -0.49
HNRNPU-228ENST00000640306 TMEM89A2RUT3 159 aa11.99□□□□□ -0.49
HNRNPU-228ENST00000640306 NDUFA7O95182 113 aa11.99□□□□□ -0.49
HNRNPU-228ENST00000640306 ATXN8Q156A1 80 aa11.99□□□□□ -0.49
HNRNPU-228ENST00000640306 DYNLRB2Q8TF09 96 aa11.99□□□□□ -0.49
HNRNPU-228ENST00000640306 IGHV3-53P01767 116 aa11.99□□□□□ -0.49
HNRNPU-228ENST00000640306 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.99□□□□□ -0.49
HNRNPU-228ENST00000640306 Q6YL49 198 aa11.98□□□□□ -0.49
HNRNPU-228ENST00000640306 MAP6D1Q9H9H5 199 aa11.98□□□□□ -0.49
HNRNPU-228ENST00000640306 A0A096LNT2 108 aa11.98□□□□□ -0.49
HNRNPU-228ENST00000640306 DGAT2L7PQ6IED9 249 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms