RNA–Protein interactions for RNA: ENST00000640001.1

HNRNPU-223, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5 BASIC

Gene HNRNPU, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-223	ENST00000640001	C1QTNF4	Q9BXJ3	329 aa		5.72	□□□□□ -1.49
HNRNPU-223	ENST00000640001	HIGD1B	Q9P298	99 aa		5.72	□□□□□ -1.49
HNRNPU-223	ENST00000640001	ZNF580	Q9UK33	172 aa		5.72	□□□□□ -1.49
HNRNPU-223	ENST00000640001	HHLA3	Q9XRX5	114 aa		5.72	□□□□□ -1.49
HNRNPU-223	ENST00000640001	CIRBP	Q14011	172 aa	Known RBP	5.72	□□□□□ -1.49
HNRNPU-223	ENST00000640001	C20orf203	Q8NBC4	194 aa		5.72	□□□□□ -1.49
HNRNPU-223	ENST00000640001	TIMM17A	Q99595	171 aa		5.72	□□□□□ -1.49
HNRNPU-223	ENST00000640001	HTN3	P15516	51 aa		5.72	□□□□□ -1.49
HNRNPU-223	ENST00000640001	ZNF625	Q96I27	306 aa	Predicted RBP	5.72	□□□□□ -1.49
HNRNPU-223	ENST00000640001	TAL2	Q16559	108 aa		5.71	□□□□□ -1.49
HNRNPU-223	ENST00000640001	OCIAD2	Q56VL3	154 aa		5.71	□□□□□ -1.49
HNRNPU-223	ENST00000640001	TMEM238	C9JI98	176 aa		5.71	□□□□□ -1.5
HNRNPU-223	ENST00000640001	POLR2K	P53803	58 aa	Known RBP	5.71	□□□□□ -1.5
HNRNPU-223	ENST00000640001	RNASE8	Q8TDE3	154 aa	Known RBP	5.71	□□□□□ -1.5
HNRNPU-223	ENST00000640001	SPINK8	P0C7L1	97 aa		5.71	□□□□□ -1.5
HNRNPU-223	ENST00000640001	FLNA	P21333	2647 aa	Known RBP	5.7	□□□□□ -1.5
HNRNPU-223	ENST00000640001	HECTD1	Q9ULT8	2610 aa		5.7	□□□□□ -1.5
HNRNPU-223	ENST00000640001		H3BMG7	143 aa		5.7	□□□□□ -1.5
HNRNPU-223	ENST00000640001	RNF152	Q8N8N0	203 aa		5.7	□□□□□ -1.5
HNRNPU-223	ENST00000640001	OR13C6P	Q8NH95	151 aa		5.7	□□□□□ -1.5
HNRNPU-223	ENST00000640001	LINC01006	Q8NI28	216 aa		5.7	□□□□□ -1.5
HNRNPU-223	ENST00000640001	FAM19A4	Q96LR4	140 aa		5.7	□□□□□ -1.5
HNRNPU-223	ENST00000640001	C1orf43	Q9BWL3	253 aa		5.7	□□□□□ -1.5
HNRNPU-223	ENST00000640001	WFDC10A	Q9H1F0	79 aa		5.7	□□□□□ -1.5
HNRNPU-223	ENST00000640001	TRBV27	A0A0K0K1C4	114 aa		5.7	□□□□□ -1.5
HNRNPU-223	ENST00000640001		A0A096LNT2	108 aa		5.69	□□□□□ -1.5
HNRNPU-223	ENST00000640001	TRAV25	A0A0B4J276	109 aa		5.69	□□□□□ -1.5
HNRNPU-223	ENST00000640001	GAGE2B	Q13066	116 aa		5.69	□□□□□ -1.5
HNRNPU-223	ENST00000640001	GAGE2E	Q4V326	116 aa		5.69	□□□□□ -1.5
HNRNPU-223	ENST00000640001	SMR3A	Q99954	134 aa		5.69	□□□□□ -1.5
HNRNPU-223	ENST00000640001	GAGE2D	Q9UEU5	116 aa		5.69	□□□□□ -1.5
HNRNPU-223	ENST00000640001	IGLL5	B9A064	214 aa		5.69	□□□□□ -1.5
HNRNPU-223	ENST00000640001		Q6ZTI0	123 aa		5.69	□□□□□ -1.5
HNRNPU-223	ENST00000640001	NDUFA12	Q9UI09	145 aa		5.69	□□□□□ -1.5
HNRNPU-223	ENST00000640001	ERG28	Q9UKR5	140 aa		5.69	□□□□□ -1.5
HNRNPU-223	ENST00000640001	TRBV6-5	A0A0K0K1A5	114 aa		5.69	□□□□□ -1.5
HNRNPU-223	ENST00000640001	PRSS47	A8MTI9	375 aa		5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001	NXPH4	O95158	308 aa		5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001	TSHB	P01222	138 aa		5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001	GAGE6	Q13070	117 aa		5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001	ODF3L2	Q3SX64	289 aa		5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001	C11orf68	Q9H3H3	251 aa	Known RBP	5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001	ZMAT4	Q9H898	229 aa		5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001	KIF25-AS1	Q9Y6Z4	181 aa		5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001	PLA2G2A	P14555	144 aa		5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001	CFAP126	Q5VTH2	177 aa		5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001	ZNF575	Q86XF7	245 aa		5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001	ITPR1	Q14643	2758 aa		5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001	TRAV8-3	A0A0A6YYJ7	113 aa		5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001	LEPROT	O15243	131 aa		5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001	RBMY1A1	P0DJD3	496 aa	Known RBP	5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001	RBMY1C	P0DJD4	496 aa		5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001	RBMY1F	Q15415	496 aa	Known RBP	5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001		Q6ZUT4	128 aa		5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001	ESM1	Q9NQ30	184 aa		5.68	□□□□□ -1.5
HNRNPU-223	ENST00000640001	IGLV4-3	A0A075B6K6	122 aa		5.67	□□□□□ -1.5
HNRNPU-223	ENST00000640001	RBMY1B	A6NDE4	496 aa	Known RBP	5.67	□□□□□ -1.5
HNRNPU-223	ENST00000640001	RBMY1E	A6NEQ0	496 aa	Known RBP	5.67	□□□□□ -1.5
HNRNPU-223	ENST00000640001	RBMY1D	P0C7P1	496 aa	Known RBP	5.67	□□□□□ -1.5
HNRNPU-223	ENST00000640001	LINC00315	P59091	139 aa		5.67	□□□□□ -1.5
HNRNPU-223	ENST00000640001	ETDB	Q3ZM63	59 aa		5.67	□□□□□ -1.5
HNRNPU-223	ENST00000640001	TMEM243	Q9BU79	118 aa		5.67	□□□□□ -1.5
HNRNPU-223	ENST00000640001	SPANXA1	Q9NS26	97 aa		5.67	□□□□□ -1.5
HNRNPU-223	ENST00000640001	ASH1L	Q9NR48	2969 aa	Known RBP	5.67	□□□□□ -1.5
HNRNPU-223	ENST00000640001	FSHB	P01225	129 aa		5.67	□□□□□ -1.5
HNRNPU-223	ENST00000640001		A0A096LPF7	62 aa		5.67	□□□□□ -1.5
HNRNPU-223	ENST00000640001	IGIP	A6NJ69	53 aa		5.67	□□□□□ -1.5
HNRNPU-223	ENST00000640001		K7EQD1	137 aa		5.67	□□□□□ -1.5
HNRNPU-223	ENST00000640001	RPL32	P62910	135 aa	Known RBP	5.67	□□□□□ -1.5
HNRNPU-223	ENST00000640001	PRIMA1	Q86XR5	153 aa		5.67	□□□□□ -1.5
HNRNPU-223	ENST00000640001	LINC00467	Q9BRT7	94 aa		5.67	□□□□□ -1.5
HNRNPU-223	ENST00000640001	F8	P00451	2351 aa		5.67	□□□□□ -1.5
HNRNPU-223	ENST00000640001	TRBV7-3	A0A075B6L6	115 aa		5.66	□□□□□ -1.5
HNRNPU-223	ENST00000640001	DNAJC30	Q96LL9	226 aa		5.66	□□□□□ -1.5
HNRNPU-223	ENST00000640001	TM2D2	Q9BX73	214 aa		5.66	□□□□□ -1.5
HNRNPU-223	ENST00000640001	ITPR3	Q14573	2671 aa		5.66	□□□□□ -1.5
HNRNPU-223	ENST00000640001	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	5.66	□□□□□ -1.5
HNRNPU-223	ENST00000640001	LINC01546	A6NGU7	62 aa		5.66	□□□□□ -1.5
HNRNPU-223	ENST00000640001	SPEN	Q96T58	3664 aa	Known RBP	5.66	□□□□□ -1.5
HNRNPU-223	ENST00000640001	TMEM263	Q8WUH6	116 aa	Known RBP	5.66	□□□□□ -1.5
HNRNPU-223	ENST00000640001		A4D1N5	150 aa		5.66	□□□□□ -1.5
HNRNPU-223	ENST00000640001	ZNF22	P17026	224 aa	Predicted RBP	5.66	□□□□□ -1.5
HNRNPU-223	ENST00000640001	ZFAND6	Q6FIF0	208 aa		5.66	□□□□□ -1.5
HNRNPU-223	ENST00000640001	PRO1854	Q9UHT4	67 aa		5.66	□□□□□ -1.5
HNRNPU-223	ENST00000640001	C16orf74	Q96GX8	76 aa		5.65	□□□□□ -1.5
HNRNPU-223	ENST00000640001	DCHS2	Q6V1P9	2916 aa		5.65	□□□□□ -1.51
HNRNPU-223	ENST00000640001	MUSTN1	Q8IVN3	82 aa		5.65	□□□□□ -1.51
HNRNPU-223	ENST00000640001	DNAL4	O96015	105 aa		5.65	□□□□□ -1.51
HNRNPU-223	ENST00000640001	IGHV3-30-3	P0DP02	117 aa		5.65	□□□□□ -1.51
HNRNPU-223	ENST00000640001		Q8N2B8	174 aa		5.65	□□□□□ -1.51
HNRNPU-223	ENST00000640001	INAFM1	C9JVW0	142 aa		5.64	□□□□□ -1.51
HNRNPU-223	ENST00000640001	MORN3	Q6PF18	240 aa	Predicted RBP	5.64	□□□□□ -1.51
HNRNPU-223	ENST00000640001		Q6ZSN1	163 aa		5.64	□□□□□ -1.51
HNRNPU-223	ENST00000640001	DAND5	Q8N907	189 aa		5.64	□□□□□ -1.51
HNRNPU-223	ENST00000640001	IGLV4-69	A0A075B6H9	119 aa		5.64	□□□□□ -1.51
HNRNPU-223	ENST00000640001		A0A0J9YY99	117 aa		5.64	□□□□□ -1.51
HNRNPU-223	ENST00000640001	CRLF1	O75462	422 aa		5.64	□□□□□ -1.51
HNRNPU-223	ENST00000640001	WFDC2	Q14508	124 aa		5.64	□□□□□ -1.51
HNRNPU-223	ENST00000640001	SH2D6	Q7Z4S9	175 aa		5.64	□□□□□ -1.51
HNRNPU-223	ENST00000640001	DEFB4A	O15263	64 aa		5.64	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms