RNA–Protein interactions for RNA: ENST00000639848.1

HLA-B-256, Transcript of major histocompatibility complex, class I, B, human

BASIC

Gene HLA-B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-B-256	ENST00000639848	RPL39L	Q96EH5	51 aa	Known RBP	13.36	□□□□□ -0.27
HLA-B-256	ENST00000639848	TRBV6-5	A0A0K0K1A5	114 aa		13.35	□□□□□ -0.27
HLA-B-256	ENST00000639848	NCR2	O95944	276 aa		13.35	□□□□□ -0.27
HLA-B-256	ENST00000639848	AMT	P48728	403 aa		13.35	□□□□□ -0.27
HLA-B-256	ENST00000639848	APOB	P04114	4563 aa	Known RBP	13.35	□□□□□ -0.27
HLA-B-256	ENST00000639848	SMIM27	A0A1W2PRY6	76 aa		13.34	□□□□□ -0.27
HLA-B-256	ENST00000639848	KRTAP10-1	P60331	282 aa		13.34	□□□□□ -0.27
HLA-B-256	ENST00000639848	BAALC	Q8WXS3	180 aa		13.34	□□□□□ -0.27
HLA-B-256	ENST00000639848	MRAP2	Q96G30	205 aa		13.34	□□□□□ -0.27
HLA-B-256	ENST00000639848	SDHAF1	A6NFY7	115 aa		13.33	□□□□□ -0.28
HLA-B-256	ENST00000639848	RNF185	Q96GF1	192 aa		13.33	□□□□□ -0.28
HLA-B-256	ENST00000639848	UBE2L6	O14933	153 aa		13.32	□□□□□ -0.28
HLA-B-256	ENST00000639848	LECT2	O14960	151 aa		13.32	□□□□□ -0.28
HLA-B-256	ENST00000639848	RAB4A	P20338	218 aa		13.32	□□□□□ -0.28
HLA-B-256	ENST00000639848	LINC00269	Q8N2A0	174 aa		13.32	□□□□□ -0.28
HLA-B-256	ENST00000639848		A0A1B0GW15	77 aa		13.31	□□□□□ -0.28
HLA-B-256	ENST00000639848	C20orf203	Q8NBC4	194 aa		13.31	□□□□□ -0.28
HLA-B-256	ENST00000639848	REG3A	Q06141	175 aa		13.3	□□□□□ -0.28
HLA-B-256	ENST00000639848	CLLU1	Q5K131	121 aa		13.3	□□□□□ -0.28
HLA-B-256	ENST00000639848	AMN1	Q8IY45	258 aa		13.3	□□□□□ -0.28
HLA-B-256	ENST00000639848	ST20	Q9HBF5	79 aa		13.3	□□□□□ -0.28
HLA-B-256	ENST00000639848		H7C423	109 aa		13.29	□□□□□ -0.28
HLA-B-256	ENST00000639848		I3L3M4	83 aa		13.29	□□□□□ -0.28
HLA-B-256	ENST00000639848	PPP1R17	O96001	155 aa		13.29	□□□□□ -0.28
HLA-B-256	ENST00000639848	APCS	P02743	223 aa		13.29	□□□□□ -0.28
HLA-B-256	ENST00000639848	C14orf177	Q52M58	125 aa		13.29	□□□□□ -0.28
HLA-B-256	ENST00000639848		Q8N1X5	172 aa		13.29	□□□□□ -0.28
HLA-B-256	ENST00000639848	DEFB104A	Q8WTQ1	72 aa		13.29	□□□□□ -0.28
HLA-B-256	ENST00000639848	TMEM70	Q9BUB7	260 aa		13.29	□□□□□ -0.28
HLA-B-256	ENST00000639848	IGLV4-60	A0A075B6I1	120 aa		13.28	□□□□□ -0.28
HLA-B-256	ENST00000639848	TRAV8-4	A0A0B4J246	113 aa		13.28	□□□□□ -0.28
HLA-B-256	ENST00000639848	PNRC1	Q12796	327 aa	Predicted RBP	13.28	□□□□□ -0.28
HLA-B-256	ENST00000639848	CLPSL2	Q6UWE3	100 aa		13.28	□□□□□ -0.28
HLA-B-256	ENST00000639848	GAS8-AS1	O95177	125 aa		13.27	□□□□□ -0.29
HLA-B-256	ENST00000639848	PMCH	P20382	165 aa		13.27	□□□□□ -0.29
HLA-B-256	ENST00000639848	XG	P55808	180 aa		13.27	□□□□□ -0.29
HLA-B-256	ENST00000639848	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	13.26	□□□□□ -0.29
HLA-B-256	ENST00000639848	TRBV27	A0A0K0K1C4	114 aa		13.26	□□□□□ -0.29
HLA-B-256	ENST00000639848	PPP1R2P9	O14990	202 aa		13.26	□□□□□ -0.29
HLA-B-256	ENST00000639848	S100A8	P05109	93 aa		13.26	□□□□□ -0.29
HLA-B-256	ENST00000639848	RPS10	P46783	165 aa	Known RBP	13.26	□□□□□ -0.29
HLA-B-256	ENST00000639848	POLR2K	P53803	58 aa	Known RBP	13.26	□□□□□ -0.29
HLA-B-256	ENST00000639848	FAM104B	Q5XKR9	115 aa		13.26	□□□□□ -0.29
HLA-B-256	ENST00000639848	KRTAP26-1	Q6PEX3	210 aa		13.26	□□□□□ -0.29
HLA-B-256	ENST00000639848	KRTAP17-1	Q9BYP8	105 aa		13.25	□□□□□ -0.29
HLA-B-256	ENST00000639848	PCLO	Q9Y6V0	5065 aa		13.25	□□□□□ -0.29
HLA-B-256	ENST00000639848	HLA-DQA1	P01909	254 aa		13.24	□□□□□ -0.29
HLA-B-256	ENST00000639848	CAMP	P49913	170 aa		13.24	□□□□□ -0.29
HLA-B-256	ENST00000639848	AMMECR1L	Q6DCA0	310 aa		13.24	□□□□□ -0.29
HLA-B-256	ENST00000639848	LINC00862	A6NCI5	91 aa		13.23	□□□□□ -0.29
HLA-B-256	ENST00000639848	USP17L23	D6RBM5	183 aa		13.23	□□□□□ -0.29
HLA-B-256	ENST00000639848	TSHB	P01222	138 aa		13.23	□□□□□ -0.29
HLA-B-256	ENST00000639848	ESD	P10768	282 aa		13.23	□□□□□ -0.29
HLA-B-256	ENST00000639848	ZNF25	P17030	456 aa	Predicted RBP	13.23	□□□□□ -0.29
HLA-B-256	ENST00000639848	HBB	P68871	147 aa		13.23	□□□□□ -0.29
HLA-B-256	ENST00000639848	NRAC	Q8N912	160 aa		13.23	□□□□□ -0.29
HLA-B-256	ENST00000639848	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	13.22	□□□□□ -0.29
HLA-B-256	ENST00000639848		A0A1B0GXF2	115 aa		13.22	□□□□□ -0.29
HLA-B-256	ENST00000639848	IGKV2-29	A2NJV5	120 aa	Predicted RBP	13.22	□□□□□ -0.29
HLA-B-256	ENST00000639848		F8W036	122 aa		13.22	□□□□□ -0.29
HLA-B-256	ENST00000639848	VCY	O14598	125 aa		13.22	□□□□□ -0.29
HLA-B-256	ENST00000639848	FGF6	P10767	208 aa		13.22	□□□□□ -0.29
HLA-B-256	ENST00000639848	IFITM2	Q01629	132 aa		13.22	□□□□□ -0.29
HLA-B-256	ENST00000639848	MRPL51	Q4U2R6	128 aa	Known RBP	13.22	□□□□□ -0.29
HLA-B-256	ENST00000639848	ATP5L2	Q7Z4Y8	100 aa		13.22	□□□□□ -0.29
HLA-B-256	ENST00000639848	KRTAP4-5	Q9BYR2	181 aa		13.22	□□□□□ -0.29
HLA-B-256	ENST00000639848	TMEM242	Q9NWH2	141 aa		13.22	□□□□□ -0.29
HLA-B-256	ENST00000639848	IGLV10-54	A0A075B6I4	117 aa		13.21	□□□□□ -0.29
HLA-B-256	ENST00000639848	SMKR1	H3BMG3	65 aa		13.21	□□□□□ -0.29
HLA-B-256	ENST00000639848	SUMO2	P61956	95 aa	Known RBP	13.21	□□□□□ -0.29
HLA-B-256	ENST00000639848	MRPL54	Q6P161	138 aa	Known RBP	13.21	□□□□□ -0.29
HLA-B-256	ENST00000639848	MT-ND4L	P03901	98 aa		13.2	□□□□□ -0.3
HLA-B-256	ENST00000639848	RNASEK	Q6P5S7	137 aa	Known RBP	13.2	□□□□□ -0.3
HLA-B-256	ENST00000639848	UQCC3	Q6UW78	93 aa		13.2	□□□□□ -0.3
HLA-B-256	ENST00000639848		Q6ZSA8	131 aa		13.2	□□□□□ -0.3
HLA-B-256	ENST00000639848	ANAPC16	Q96DE5	110 aa		13.2	□□□□□ -0.3
HLA-B-256	ENST00000639848	TRBV24-1	A0A075B6N3	115 aa		13.19	□□□□□ -0.3
HLA-B-256	ENST00000639848	BTF3L4	Q96K17	158 aa		13.19	□□□□□ -0.3
HLA-B-256	ENST00000639848	C20orf78	Q9BR46	151 aa		13.19	□□□□□ -0.3
HLA-B-256	ENST00000639848	C7orf77	A4D0Y5	90 aa		13.18	□□□□□ -0.3
HLA-B-256	ENST00000639848	CKS2	P33552	79 aa		13.18	□□□□□ -0.3
HLA-B-256	ENST00000639848	RPL32	P62910	135 aa	Known RBP	13.18	□□□□□ -0.3
HLA-B-256	ENST00000639848	MRPL52	Q86TS9	123 aa	Known RBP	13.18	□□□□□ -0.3
HLA-B-256	ENST00000639848	CLRN3	Q8NCR9	226 aa		13.18	□□□□□ -0.3
HLA-B-256	ENST00000639848	TMEM101	Q96IK0	257 aa		13.18	□□□□□ -0.3
HLA-B-256	ENST00000639848	KIR2DL4	Q99706	377 aa		13.18	□□□□□ -0.3
HLA-B-256	ENST00000639848	PPBP	P02775	128 aa		13.17	□□□□□ -0.3
HLA-B-256	ENST00000639848	FCER1G	P30273	86 aa		13.17	□□□□□ -0.3
HLA-B-256	ENST00000639848	DGAT2L7P	Q6IED9	249 aa		13.17	□□□□□ -0.3
HLA-B-256	ENST00000639848	FAM30A	Q9NZY2	134 aa		13.17	□□□□□ -0.3
HLA-B-256	ENST00000639848	PRSS1	P07477	247 aa		13.16	□□□□□ -0.3
HLA-B-256	ENST00000639848	EPM2A	B3EWF7	344 aa		13.15	□□□□□ -0.3
HLA-B-256	ENST00000639848	PHOX2A	O14813	284 aa		13.15	□□□□□ -0.3
HLA-B-256	ENST00000639848	TCAP	O15273	167 aa		13.15	□□□□□ -0.3
HLA-B-256	ENST00000639848	SMAGP	Q0VAQ4	97 aa		13.15	□□□□□ -0.3
HLA-B-256	ENST00000639848	OR5A1	Q8NGJ0	315 aa		13.15	□□□□□ -0.3
HLA-B-256	ENST00000639848		D6R8Y8	96 aa		13.14	□□□□□ -0.31
HLA-B-256	ENST00000639848	TNFRSF6B	O95407	300 aa		13.14	□□□□□ -0.31
HLA-B-256	ENST00000639848	LINC01620	Q4KN68	170 aa		13.14	□□□□□ -0.31
HLA-B-256	ENST00000639848	ABCA13	Q86UQ4	5058 aa		13.14	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 157.8 ms