RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	RAB19	A4D1S5	217 aa		9.43	□□□□□ -0.9
TARDBP-231	ENST00000639599	MEF2B	Q02080	365 aa	Predicted RBP	9.43	□□□□□ -0.9
TARDBP-231	ENST00000639599	LYZL1	Q6UWQ5	148 aa		9.43	□□□□□ -0.9
TARDBP-231	ENST00000639599	SDIM1	Q6ZPB5	146 aa		9.43	□□□□□ -0.9
TARDBP-231	ENST00000639599	C7orf33	Q8WU49	177 aa		9.43	□□□□□ -0.9
TARDBP-231	ENST00000639599	IGLV4-60	A0A075B6I1	120 aa		9.42	□□□□□ -0.9
TARDBP-231	ENST00000639599	TRAV1-1	A0A0B4J248	108 aa		9.42	□□□□□ -0.9
TARDBP-231	ENST00000639599	NTF3	P20783	257 aa		9.42	□□□□□ -0.9
TARDBP-231	ENST00000639599	RNF185	Q96GF1	192 aa		9.42	□□□□□ -0.9
TARDBP-231	ENST00000639599	C19orf71	A6NCJ1	209 aa		9.41	□□□□□ -0.9
TARDBP-231	ENST00000639599	KRTAP26-1	Q6PEX3	210 aa		9.41	□□□□□ -0.9
TARDBP-231	ENST00000639599	GAGE12H	A6NDE8	117 aa		9.4	□□□□□ -0.9
TARDBP-231	ENST00000639599	RNASEK	Q6P5S7	137 aa	Known RBP	9.4	□□□□□ -0.9
TARDBP-231	ENST00000639599		Q6ZRU5	148 aa		9.4	□□□□□ -0.9
TARDBP-231	ENST00000639599	PANO1	I0J062	215 aa		9.39	□□□□□ -0.91
TARDBP-231	ENST00000639599	BCL2	P10415	239 aa		9.39	□□□□□ -0.91
TARDBP-231	ENST00000639599	TAGLN2	P37802	199 aa	Known RBP	9.39	□□□□□ -0.91
TARDBP-231	ENST00000639599	HNRNPA3	P51991	378 aa	Known RBP	9.39	□□□□□ -0.91
TARDBP-231	ENST00000639599		A0A087WYN8	130 aa		9.38	□□□□□ -0.91
TARDBP-231	ENST00000639599	APCS	P02743	223 aa		9.38	□□□□□ -0.91
TARDBP-231	ENST00000639599	CHTF8	P0CG12	524 aa		9.38	□□□□□ -0.91
TARDBP-231	ENST00000639599	GFRA4	Q9GZZ7	299 aa		9.38	□□□□□ -0.91
TARDBP-231	ENST00000639599	RPP21	Q9H633	154 aa	Known RBP	9.38	□□□□□ -0.91
TARDBP-231	ENST00000639599	PKIG	Q9Y2B9	76 aa		9.38	□□□□□ -0.91
TARDBP-231	ENST00000639599	CTRL	P40313	264 aa		9.37	□□□□□ -0.91
TARDBP-231	ENST00000639599	RPS10	P46783	165 aa	Known RBP	9.37	□□□□□ -0.91
TARDBP-231	ENST00000639599	HIGD2B	Q4VC39	106 aa		9.37	□□□□□ -0.91
TARDBP-231	ENST00000639599	C9orf62	Q8N4C0	152 aa		9.37	□□□□□ -0.91
TARDBP-231	ENST00000639599	NUDT10	Q8NFP7	164 aa		9.37	□□□□□ -0.91
TARDBP-231	ENST00000639599	SPACA4	Q8TDM5	124 aa		9.37	□□□□□ -0.91
TARDBP-231	ENST00000639599	BORCS7	Q96B45	105 aa		9.37	□□□□□ -0.91
TARDBP-231	ENST00000639599	NUDT11	Q96G61	164 aa		9.37	□□□□□ -0.91
TARDBP-231	ENST00000639599	TMEM101	Q96IK0	257 aa		9.37	□□□□□ -0.91
TARDBP-231	ENST00000639599	BTF3L4	Q96K17	158 aa		9.37	□□□□□ -0.91
TARDBP-231	ENST00000639599	TRAV26-2	A0A0B4J265	109 aa		9.36	□□□□□ -0.91
TARDBP-231	ENST00000639599	IGKV2-24	A0A0C4DH68	120 aa		9.36	□□□□□ -0.91
TARDBP-231	ENST00000639599	NCR2	O95944	276 aa		9.36	□□□□□ -0.91
TARDBP-231	ENST00000639599	CIRBP	Q14011	172 aa	Known RBP	9.36	□□□□□ -0.91
TARDBP-231	ENST00000639599	MAJIN	Q3KP22	176 aa		9.36	□□□□□ -0.91
TARDBP-231	ENST00000639599	TEX261	Q6UWH6	196 aa		9.36	□□□□□ -0.91
TARDBP-231	ENST00000639599	GTSF1	Q8WW33	167 aa		9.36	□□□□□ -0.91
TARDBP-231	ENST00000639599	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	9.36	□□□□□ -0.91
TARDBP-231	ENST00000639599	NDUFS6	O75380	124 aa	Known RBP	9.35	□□□□□ -0.91
TARDBP-231	ENST00000639599	COX6A2	Q02221	97 aa		9.35	□□□□□ -0.91
TARDBP-231	ENST00000639599	RNASE7	Q9H1E1	156 aa	Known RBP	9.35	□□□□□ -0.91
TARDBP-231	ENST00000639599	TRBV20OR9-2	A0A075B6H5	130 aa		9.34	□□□□□ -0.91
TARDBP-231	ENST00000639599	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	9.34	□□□□□ -0.91
TARDBP-231	ENST00000639599	IGKV2-29	A2NJV5	120 aa	Predicted RBP	9.34	□□□□□ -0.91
TARDBP-231	ENST00000639599		H7C423	109 aa		9.34	□□□□□ -0.91
TARDBP-231	ENST00000639599	GATD1	Q8NB37	220 aa		9.34	□□□□□ -0.91
TARDBP-231	ENST00000639599	PHOX2A	O14813	284 aa		9.33	□□□□□ -0.92
TARDBP-231	ENST00000639599	GATC	O43716	136 aa	Known RBP	9.33	□□□□□ -0.92
TARDBP-231	ENST00000639599	FGF6	P10767	208 aa		9.33	□□□□□ -0.92
TARDBP-231	ENST00000639599	PMCH	P20382	165 aa		9.33	□□□□□ -0.92
TARDBP-231	ENST00000639599		Q6ZNX1	250 aa		9.33	□□□□□ -0.92
TARDBP-231	ENST00000639599	SLC51B	Q86UW2	128 aa		9.33	□□□□□ -0.92
TARDBP-231	ENST00000639599	C15orf56	Q8N910	161 aa		9.33	□□□□□ -0.92
TARDBP-231	ENST00000639599	RPL39L	Q96EH5	51 aa	Known RBP	9.33	□□□□□ -0.92
TARDBP-231	ENST00000639599	CNFN	Q9BYD5	112 aa		9.33	□□□□□ -0.92
TARDBP-231	ENST00000639599	SDHAF1	A6NFY7	115 aa		9.32	□□□□□ -0.92
TARDBP-231	ENST00000639599	SLPI	P03973	132 aa		9.32	□□□□□ -0.92
TARDBP-231	ENST00000639599	ZNF25	P17030	456 aa	Predicted RBP	9.32	□□□□□ -0.92
TARDBP-231	ENST00000639599	STPG4	Q8N801	248 aa		9.32	□□□□□ -0.92
TARDBP-231	ENST00000639599	PLAC8	Q9NZF1	115 aa		9.32	□□□□□ -0.92
TARDBP-231	ENST00000639599	LINC00474	Q9P2X8	69 aa		9.32	□□□□□ -0.92
TARDBP-231	ENST00000639599		I3L3M4	83 aa		9.31	□□□□□ -0.92
TARDBP-231	ENST00000639599	XCL1	P47992	114 aa		9.31	□□□□□ -0.92
TARDBP-231	ENST00000639599	CEBPG	P53567	150 aa		9.31	□□□□□ -0.92
TARDBP-231	ENST00000639599	OR5A1	Q8NGJ0	315 aa		9.31	□□□□□ -0.92
TARDBP-231	ENST00000639599	LYPD6B	Q8NI32	183 aa		9.31	□□□□□ -0.92
TARDBP-231	ENST00000639599	GVQW2	A0A096LPI5	108 aa	Predicted RBP	9.3	□□□□□ -0.92
TARDBP-231	ENST00000639599		A8MWL6	223 aa		9.3	□□□□□ -0.92
TARDBP-231	ENST00000639599	SS18	Q15532	418 aa		9.3	□□□□□ -0.92
TARDBP-231	ENST00000639599	PRSS3P2	Q8NHM4	247 aa		9.3	□□□□□ -0.92
TARDBP-231	ENST00000639599	OCC1	Q8TAD7	63 aa		9.3	□□□□□ -0.92
TARDBP-231	ENST00000639599	MRAP2	Q96G30	205 aa		9.3	□□□□□ -0.92
TARDBP-231	ENST00000639599	IGHV1-58	A0A0C4DH39	117 aa		9.29	□□□□□ -0.92
TARDBP-231	ENST00000639599		K7EN84	100 aa		9.29	□□□□□ -0.92
TARDBP-231	ENST00000639599	ST20	Q9HBF5	79 aa		9.29	□□□□□ -0.92
TARDBP-231	ENST00000639599	HMCN2	Q8NDA2	5059 aa		9.29	□□□□□ -0.92
TARDBP-231	ENST00000639599	ZNF561-AS1	K7EIQ3	104 aa		9.28	□□□□□ -0.92
TARDBP-231	ENST00000639599	CCL25	O15444	150 aa		9.28	□□□□□ -0.92
TARDBP-231	ENST00000639599	CARD19	Q96LW7	228 aa		9.28	□□□□□ -0.92
TARDBP-231	ENST00000639599	LRP1	Q07954	4544 aa	Known RBP	9.28	□□□□□ -0.92
TARDBP-231	ENST00000639599	MAL	P21145	153 aa		9.27	□□□□□ -0.93
TARDBP-231	ENST00000639599	FOXA3	P55318	350 aa	Predicted RBP	9.27	□□□□□ -0.93
TARDBP-231	ENST00000639599	BLOC1S1	P78537	153 aa		9.27	□□□□□ -0.93
TARDBP-231	ENST00000639599	SMAGP	Q0VAQ4	97 aa		9.27	□□□□□ -0.93
TARDBP-231	ENST00000639599	FOXI1	Q12951	378 aa		9.27	□□□□□ -0.93
TARDBP-231	ENST00000639599	TCTE3	Q8IZS6	198 aa		9.27	□□□□□ -0.93
TARDBP-231	ENST00000639599	ISOC2	Q96AB3	205 aa		9.27	□□□□□ -0.93
TARDBP-231	ENST00000639599	TMEM242	Q9NWH2	141 aa		9.27	□□□□□ -0.93
TARDBP-231	ENST00000639599	TMEM250	H0YL14	139 aa		9.26	□□□□□ -0.93
TARDBP-231	ENST00000639599	MT1HL1	P0DM35	61 aa		9.26	□□□□□ -0.93
TARDBP-231	ENST00000639599	PRR3	P79522	188 aa	Known RBP	9.26	□□□□□ -0.93
TARDBP-231	ENST00000639599	FAM210A	Q96ND0	272 aa		9.26	□□□□□ -0.93
TARDBP-231	ENST00000639599		A0A096LNI7	61 aa		9.25	□□□□□ -0.93
TARDBP-231	ENST00000639599	LINC00959	A0A1B0GUT2	108 aa		9.25	□□□□□ -0.93
TARDBP-231	ENST00000639599	C7orf77	A4D0Y5	90 aa		9.25	□□□□□ -0.93
TARDBP-231	ENST00000639599	FCER1G	P30273	86 aa		9.25	□□□□□ -0.93

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