RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 IGHV3-30-3P0DP02 117 aa10.82□□□□□ -0.68
SCARB2-216ENST00000639300 DAZ2Q13117 558 aaKnown RBP10.82□□□□□ -0.68
SCARB2-216ENST00000639300 DAZ4Q86SG3 579 aaKnown RBP10.82□□□□□ -0.68
SCARB2-216ENST00000639300 DAZ3Q9NR90 486 aaKnown RBP10.82□□□□□ -0.68
SCARB2-216ENST00000639300 TET2Q6N021 2002 aaPredicted RBP10.81□□□□□ -0.68
SCARB2-216ENST00000639300 MAPKAPK5-AS1Q8N8E1 139 aa10.81□□□□□ -0.68
SCARB2-216ENST00000639300 C4orf3Q8WVX3 66 aa10.81□□□□□ -0.68
SCARB2-216ENST00000639300 WDFY4Q6ZS81 3184 aa10.81□□□□□ -0.68
SCARB2-216ENST00000639300 PRSS47A8MTI9 375 aa10.81□□□□□ -0.68
SCARB2-216ENST00000639300 PSCAO43653 123 aa10.81□□□□□ -0.68
SCARB2-216ENST00000639300 IGHV4-31P0DP07 118 aa10.81□□□□□ -0.68
SCARB2-216ENST00000639300 Q6ZTI0 123 aa10.81□□□□□ -0.68
SCARB2-216ENST00000639300 ANKRD17O75179 2603 aaKnown RBP10.81□□□□□ -0.68
SCARB2-216ENST00000639300 Q6ZUT4 128 aa10.8□□□□□ -0.68
SCARB2-216ENST00000639300 VSIG2Q96IQ7 327 aa10.8□□□□□ -0.68
SCARB2-216ENST00000639300 TRAV4A0A0B4J268 109 aa10.8□□□□□ -0.68
SCARB2-216ENST00000639300 CENPEQ02224 2701 aa10.8□□□□□ -0.68
SCARB2-216ENST00000639300 AVPP01185 164 aa10.8□□□□□ -0.68
SCARB2-216ENST00000639300 DEFB135Q30KP9 77 aa10.8□□□□□ -0.68
SCARB2-216ENST00000639300 Q6YL49 198 aa10.8□□□□□ -0.68
SCARB2-216ENST00000639300 ANKRD29Q8N6D5 301 aa10.8□□□□□ -0.68
SCARB2-216ENST00000639300 CRLF1O75462 422 aa10.8□□□□□ -0.68
SCARB2-216ENST00000639300 EDA2RQ9HAV5 297 aa10.8□□□□□ -0.68
SCARB2-216ENST00000639300 SND1-IT1Q9HBX3 110 aa10.8□□□□□ -0.68
SCARB2-216ENST00000639300 PRM2P04554 102 aa10.79□□□□□ -0.68
SCARB2-216ENST00000639300 IFITM1P13164 125 aa10.79□□□□□ -0.68
SCARB2-216ENST00000639300 BAALC-AS2P0C853 105 aa10.79□□□□□ -0.68
SCARB2-216ENST00000639300 CLPSL1A2RUU4 121 aa10.79□□□□□ -0.68
SCARB2-216ENST00000639300 PROK1P58294 105 aa10.79□□□□□ -0.68
SCARB2-216ENST00000639300 C15orf53Q8NAA6 179 aa10.79□□□□□ -0.68
SCARB2-216ENST00000639300 TRAV25A0A0B4J276 109 aa10.79□□□□□ -0.68
SCARB2-216ENST00000639300 URB1-AS1Q96HZ7 61 aa10.79□□□□□ -0.68
SCARB2-216ENST00000639300 HHLA3Q9XRX5 114 aa10.79□□□□□ -0.68
SCARB2-216ENST00000639300 TNRC6BQ9UPQ9 1833 aaKnown RBP10.78□□□□□ -0.68
SCARB2-216ENST00000639300 NEXN-AS1Q8NBZ9 246 aa10.78□□□□□ -0.68
SCARB2-216ENST00000639300 U3KQK5 164 aa10.78□□□□□ -0.68
SCARB2-216ENST00000639300 DEFB114Q30KQ6 69 aa10.78□□□□□ -0.68
SCARB2-216ENST00000639300 LINC01620Q4KN68 170 aa10.78□□□□□ -0.68
SCARB2-216ENST00000639300 RNASE3P12724 160 aaKnown RBP10.77□□□□□ -0.68
SCARB2-216ENST00000639300 TEN1Q86WV5 123 aa10.77□□□□□ -0.69
SCARB2-216ENST00000639300 TRANK1O15050 2925 aa10.77□□□□□ -0.69
SCARB2-216ENST00000639300 IGHV1-58A0A0C4DH39 117 aa10.77□□□□□ -0.69
SCARB2-216ENST00000639300 HERV-K104P63124 156 aa10.77□□□□□ -0.69
SCARB2-216ENST00000639300 MRPS12O15235 138 aaKnown RBP10.77□□□□□ -0.69
SCARB2-216ENST00000639300 Q9HAA7 133 aa10.77□□□□□ -0.69
SCARB2-216ENST00000639300 ICOSQ9Y6W8 199 aa10.77□□□□□ -0.69
SCARB2-216ENST00000639300 MRAPQ8TCY5 172 aa10.76□□□□□ -0.69
SCARB2-216ENST00000639300 PSMB8P28062 276 aa10.76□□□□□ -0.69
SCARB2-216ENST00000639300 HAMPP81172 84 aa10.76□□□□□ -0.69
SCARB2-216ENST00000639300 NRACQ8N912 160 aa10.76□□□□□ -0.69
SCARB2-216ENST00000639300 C9orf66Q5T8R8 295 aa10.76□□□□□ -0.69
SCARB2-216ENST00000639300 ATP5G1P05496 136 aa10.75□□□□□ -0.69
SCARB2-216ENST00000639300 TMEM263Q8WUH6 116 aaKnown RBP10.75□□□□□ -0.69
SCARB2-216ENST00000639300 M0QY20 66 aa10.75□□□□□ -0.69
SCARB2-216ENST00000639300 NDUFA11Q86Y39 141 aa10.75□□□□□ -0.69
SCARB2-216ENST00000639300 CDKN2A-AS1Q9UH64 79 aa10.75□□□□□ -0.69
SCARB2-216ENST00000639300 Q6ZSV7 163 aa10.75□□□□□ -0.69
SCARB2-216ENST00000639300 F8W735 103 aaPredicted RBP10.75□□□□□ -0.69
SCARB2-216ENST00000639300 LGALS9O00182 355 aa10.75□□□□□ -0.69
SCARB2-216ENST00000639300 C18orf65Q6ZTR6 163 aa10.75□□□□□ -0.69
SCARB2-216ENST00000639300 CLEC2BQ92478 149 aa10.75□□□□□ -0.69
SCARB2-216ENST00000639300 ADAMTS20P59510 1910 aa10.74□□□□□ -0.69
SCARB2-216ENST00000639300 IGKV2D-24A0A075B6R9 120 aa10.74□□□□□ -0.69
SCARB2-216ENST00000639300 EDN2P20800 178 aa10.74□□□□□ -0.69
SCARB2-216ENST00000639300 Q8N976 141 aa10.74□□□□□ -0.69
SCARB2-216ENST00000639300 COX7B2Q8TF08 81 aa10.74□□□□□ -0.69
SCARB2-216ENST00000639300 SPART-AS1P0CW21 52 aa10.74□□□□□ -0.69
SCARB2-216ENST00000639300 LINC00467Q9BRT7 94 aa10.74□□□□□ -0.69
SCARB2-216ENST00000639300 C2orf91Q6ZV80 131 aa10.74□□□□□ -0.69
SCARB2-216ENST00000639300 IGHV3-30P01768 117 aa10.73□□□□□ -0.69
SCARB2-216ENST00000639300 IGHV3-33P01772 117 aa10.73□□□□□ -0.69
SCARB2-216ENST00000639300 IGHV3-30-5P0DP03 117 aa10.73□□□□□ -0.69
SCARB2-216ENST00000639300 CRYBA4P53673 196 aa10.73□□□□□ -0.69
SCARB2-216ENST00000639300 MRPL23Q16540 153 aaKnown RBP10.73□□□□□ -0.69
SCARB2-216ENST00000639300 NKAPP1Q8N9T2 125 aa10.73□□□□□ -0.69
SCARB2-216ENST00000639300 ODF3Q96PU9 254 aa10.73□□□□□ -0.69
SCARB2-216ENST00000639300 MIR7-3HGQ8N6C7 128 aa10.73□□□□□ -0.69
SCARB2-216ENST00000639300 RAI1Q7Z5J4 1906 aaPredicted RBP10.73□□□□□ -0.69
SCARB2-216ENST00000639300 IGLV4-3A0A075B6K6 122 aa10.73□□□□□ -0.69
SCARB2-216ENST00000639300 TM2D2Q9BX73 214 aa10.73□□□□□ -0.69
SCARB2-216ENST00000639300 COX7A2LO14548 114 aa10.72□□□□□ -0.69
SCARB2-216ENST00000639300 A0A0J9YXY3 114 aa10.72□□□□□ -0.69
SCARB2-216ENST00000639300 TRBV10-1A0A0K0K1A3 114 aa10.72□□□□□ -0.69
SCARB2-216ENST00000639300 ZNF22P17026 224 aaPredicted RBP10.72□□□□□ -0.69
SCARB2-216ENST00000639300 FOXI1Q12951 378 aa10.72□□□□□ -0.69
SCARB2-216ENST00000639300 AGRNO00468 2067 aa10.71□□□□□ -0.69
SCARB2-216ENST00000639300 IGHV4-4A0A075B6R2 117 aa10.71□□□□□ -0.69
SCARB2-216ENST00000639300 UBL5Q9BZL1 73 aa10.71□□□□□ -0.69
SCARB2-216ENST00000639300 NFE4Q86UQ8 179 aa10.71□□□□□ -0.7
SCARB2-216ENST00000639300 MRGPRG-AS1Q2M3A8 158 aa10.7□□□□□ -0.7
SCARB2-216ENST00000639300 C9orf153Q5TBE3 101 aa10.7□□□□□ -0.7
SCARB2-216ENST00000639300 IGLV1-40P01703 118 aa10.7□□□□□ -0.7
SCARB2-216ENST00000639300 KLLNB2CW77 178 aa10.7□□□□□ -0.7
SCARB2-216ENST00000639300 KLK12Q9UKR0 248 aa10.7□□□□□ -0.7
SCARB2-216ENST00000639300 TRBV27A0A0K0K1C4 114 aa10.7□□□□□ -0.7
SCARB2-216ENST00000639300 TCL1BO95988 128 aa10.7□□□□□ -0.7
SCARB2-216ENST00000639300 ZNF843Q8N446 348 aa10.7□□□□□ -0.7
SCARB2-216ENST00000639300 DCANP1Q8TF63 244 aa10.7□□□□□ -0.7
SCARB2-216ENST00000639300 ZNF702PQ9H963 129 aa10.7□□□□□ -0.7
SCARB2-216ENST00000639300 A8MZ25 164 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms