RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 UBE2D1P51668 147 aa-4□□□□□ -3.05
LMBR1-222ENST00000638959 COTL1Q14019 142 aa-4□□□□□ -3.05
LMBR1-222ENST00000638959 HSD17B12Q53GQ0 312 aa-4□□□□□ -3.05
LMBR1-222ENST00000638959 TECPR2O15040 1411 aa-4.01□□□□□ -3.05
LMBR1-222ENST00000638959 SSSCA1O60232 199 aa-4.01□□□□□ -3.05
LMBR1-222ENST00000638959 SSR3Q9UNL2 185 aa-4.01□□□□□ -3.05
LMBR1-222ENST00000638959 R4GMQ9 66 aa-4.01□□□□□ -3.05
LMBR1-222ENST00000638959 SMG1Q96Q15 3661 aaKnown RBP-4.01□□□□□ -3.05
LMBR1-222ENST00000638959 ADGBQ8N7X0 1667 aa-4.01□□□□□ -3.05
LMBR1-222ENST00000638959 CETN3O15182 167 aa-4.02□□□□□ -3.05
LMBR1-222ENST00000638959 KRTAP19-5Q3LI72 72 aa-4.02□□□□□ -3.05
LMBR1-222ENST00000638959 PRNDQ9UKY0 176 aa-4.02□□□□□ -3.05
LMBR1-222ENST00000638959 TULP4Q9NRJ4 1543 aa-4.02□□□□□ -3.05
LMBR1-222ENST00000638959 MYOM3Q5VTT5 1437 aa-4.03□□□□□ -3.05
LMBR1-222ENST00000638959 GABARAPH6UMI1 98 aa-4.03□□□□□ -3.05
LMBR1-222ENST00000638959 COX17Q14061 63 aa-4.03□□□□□ -3.05
LMBR1-222ENST00000638959 LIN52Q52LA3 116 aa-4.03□□□□□ -3.05
LMBR1-222ENST00000638959 SNX29P2Q8IUI4 249 aa-4.03□□□□□ -3.05
LMBR1-222ENST00000638959 METTL1Q9UBP6 276 aaKnown RBP-4.03□□□□□ -3.05
LMBR1-222ENST00000638959 ACACBO00763 2458 aa-4.03□□□□□ -3.06
LMBR1-222ENST00000638959 MED23Q9ULK4 1368 aa-4.03□□□□□ -3.06
LMBR1-222ENST00000638959 KNDC1Q76NI1 1749 aa-4.04□□□□□ -3.06
LMBR1-222ENST00000638959 ARPC5O15511 151 aa-4.04□□□□□ -3.06
LMBR1-222ENST00000638959 TPM1P09493 284 aa-4.04□□□□□ -3.06
LMBR1-222ENST00000638959 LRRC37A3O60309 1634 aa-4.04□□□□□ -3.06
LMBR1-222ENST00000638959 LINC00959A0A1B0GUT2 108 aa-4.05□□□□□ -3.06
LMBR1-222ENST00000638959 AKR1C8PQ5T2L2 129 aa-4.05□□□□□ -3.06
LMBR1-222ENST00000638959 C10orf82Q8WW14 230 aa-4.05□□□□□ -3.06
LMBR1-222ENST00000638959 STOML2Q9UJZ1 356 aa-4.05□□□□□ -3.06
LMBR1-222ENST00000638959 NOP16Q9Y3C1 178 aaKnown RBP-4.05□□□□□ -3.06
LMBR1-222ENST00000638959 SBF2Q86WG5 1849 aa-4.05□□□□□ -3.06
LMBR1-222ENST00000638959 MAP3K5Q99683 1374 aa-4.05□□□□□ -3.06
LMBR1-222ENST00000638959 NUP210Q8TEM1 1887 aaPredicted RBP-4.05□□□□□ -3.06
LMBR1-222ENST00000638959 CSN2P05814 226 aa-4.06□□□□□ -3.06
LMBR1-222ENST00000638959 TPM2P07951 284 aa-4.06□□□□□ -3.06
LMBR1-222ENST00000638959 SLC35B3Q9H1N7 401 aa-4.06□□□□□ -3.06
LMBR1-222ENST00000638959 ARHGEF12Q9NZN5 1544 aa-4.06□□□□□ -3.06
LMBR1-222ENST00000638959 SETBP1Q9Y6X0 1596 aa-4.06□□□□□ -3.06
LMBR1-222ENST00000638959 MUC22E2RYF6 1773 aaPredicted RBP-4.07□□□□□ -3.06
LMBR1-222ENST00000638959 TRDV1A0A1B0GX56 115 aa-4.07□□□□□ -3.06
LMBR1-222ENST00000638959 PPP1R17O96001 155 aa-4.07□□□□□ -3.06
LMBR1-222ENST00000638959 MAGOHP61326 146 aaKnown RBP-4.07□□□□□ -3.06
LMBR1-222ENST00000638959 CCDC42Q96M95 316 aa-4.07□□□□□ -3.06
LMBR1-222ENST00000638959 NDUFA4L2Q9NRX3 87 aa-4.07□□□□□ -3.06
LMBR1-222ENST00000638959 LYRM2Q9NU23 88 aaPredicted RBP-4.07□□□□□ -3.06
LMBR1-222ENST00000638959 HSBP1L1C9JCN9 74 aa-4.08□□□□□ -3.06
LMBR1-222ENST00000638959 M0QZK8 103 aa-4.08□□□□□ -3.06
LMBR1-222ENST00000638959 UQCRQO14949 82 aa-4.08□□□□□ -3.06
LMBR1-222ENST00000638959 HIST1H1BP16401 226 aaKnown RBP-4.08□□□□□ -3.06
LMBR1-222ENST00000638959 LTC4SQ16873 150 aa-4.08□□□□□ -3.06
LMBR1-222ENST00000638959 DEFB110Q30KQ9 67 aa-4.08□□□□□ -3.06
LMBR1-222ENST00000638959 Q8N8P6 123 aa-4.08□□□□□ -3.06
LMBR1-222ENST00000638959 C9orf16Q9BUW7 83 aa-4.08□□□□□ -3.06
LMBR1-222ENST00000638959 RPRMQ9NS64 109 aa-4.08□□□□□ -3.06
LMBR1-222ENST00000638959 PRDM2Q13029 1718 aa-4.09□□□□□ -3.06
LMBR1-222ENST00000638959 CFAP46Q8IYW2 2715 aa-4.09□□□□□ -3.06
LMBR1-222ENST00000638959 E2F6O75461 281 aa-4.09□□□□□ -3.06
LMBR1-222ENST00000638959 S100A5P33763 92 aa-4.09□□□□□ -3.06
LMBR1-222ENST00000638959 HRCT1Q6UXD1 115 aa-4.09□□□□□ -3.06
LMBR1-222ENST00000638959 ATP6V0E2Q8NHE4 81 aa-4.09□□□□□ -3.06
LMBR1-222ENST00000638959 SH3BGRL3Q9H299 93 aa-4.09□□□□□ -3.06
LMBR1-222ENST00000638959 SLC25A5P05141 298 aaKnown RBP-4.1□□□□□ -3.07
LMBR1-222ENST00000638959 S4R3F8 94 aa-4.1□□□□□ -3.07
LMBR1-222ENST00000638959 CICQ96RK0 1608 aaPredicted RBP-4.1□□□□□ -3.07
LMBR1-222ENST00000638959 RPS17P08708 135 aaKnown RBP-4.11□□□□□ -3.07
LMBR1-222ENST00000638959 NDUFA12Q9UI09 145 aa-4.11□□□□□ -3.07
LMBR1-222ENST00000638959 LINC00312Q9Y6C7 94 aa-4.11□□□□□ -3.07
LMBR1-222ENST00000638959 CEP290O15078 2479 aa-4.11□□□□□ -3.07
LMBR1-222ENST00000638959 PATJQ8NI35 1801 aa-4.11□□□□□ -3.07
LMBR1-222ENST00000638959 MYH8P13535 1937 aa-4.12□□□□□ -3.07
LMBR1-222ENST00000638959 BORCS7-ASMTA0A0B4J1R7 106 aa-4.12□□□□□ -3.07
LMBR1-222ENST00000638959 S100A11P31949 105 aa-4.12□□□□□ -3.07
LMBR1-222ENST00000638959 CBLN4Q9NTU7 201 aa-4.12□□□□□ -3.07
LMBR1-222ENST00000638959 UHRF1BP1LA0JNW5 1464 aa-4.12□□□□□ -3.07
LMBR1-222ENST00000638959 TRBV7-6A0A0J9YX20 115 aa-4.13□□□□□ -3.07
LMBR1-222ENST00000638959 J3QLW9 94 aa-4.13□□□□□ -3.07
LMBR1-222ENST00000638959 RPP14O95059 124 aaKnown RBP-4.13□□□□□ -3.07
LMBR1-222ENST00000638959 IFNA17P01571 189 aa-4.13□□□□□ -3.07
LMBR1-222ENST00000638959 ZNF818PQ6ZRF7 136 aa-4.13□□□□□ -3.07
LMBR1-222ENST00000638959 RANBP2P49792 3224 aaKnown RBP-4.13□□□□□ -3.07
LMBR1-222ENST00000638959 Q6AWC8 147 aa-4.14□□□□□ -3.07
LMBR1-222ENST00000638959 RPL7L1Q6DKI1 246 aaKnown RBP-4.14□□□□□ -3.07
LMBR1-222ENST00000638959 PDE4DIPQ5VU43 2346 aa-4.14□□□□□ -3.07
LMBR1-222ENST00000638959 SHANK2Q9UPX8 1470 aa-4.15□□□□□ -3.07
LMBR1-222ENST00000638959 A6NIN4 97 aa-4.15□□□□□ -3.07
LMBR1-222ENST00000638959 SPA17Q15506 151 aa-4.15□□□□□ -3.07
LMBR1-222ENST00000638959 CRIPTQ9P021 101 aa-4.15□□□□□ -3.07
LMBR1-222ENST00000638959 ZFYVE9O95405 1425 aa-4.15□□□□□ -3.07
LMBR1-222ENST00000638959 COL14A1Q05707 1796 aaKnown RBP-4.15□□□□□ -3.07
LMBR1-222ENST00000638959 MYH2Q9UKX2 1941 aa-4.16□□□□□ -3.08
LMBR1-222ENST00000638959 TCRAP04437 139 aa-4.16□□□□□ -3.08
LMBR1-222ENST00000638959 HSD11B1P28845 292 aa-4.16□□□□□ -3.08
LMBR1-222ENST00000638959 RPL22P35268 128 aaKnown RBP-4.16□□□□□ -3.08
LMBR1-222ENST00000638959 SCIMPQ6UWF3 145 aa-4.16□□□□□ -3.08
LMBR1-222ENST00000638959 ATP11AUNQ6ZP68 121 aa-4.16□□□□□ -3.08
LMBR1-222ENST00000638959 AKAP14Q86UN6 197 aa-4.16□□□□□ -3.08
LMBR1-222ENST00000638959 ADCY9O60503 1353 aa-4.16□□□□□ -3.08
LMBR1-222ENST00000638959 LSM6P62312 80 aaKnown RBP-4.17□□□□□ -3.08
LMBR1-222ENST00000638959 LINC01545Q5VT33 79 aa-4.17□□□□□ -3.08
LMBR1-222ENST00000638959 HEPN1Q6WQI6 88 aa-4.17□□□□□ -3.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms