RNA–Protein interactions for RNA: ENST00000637915.1

CTSD-213, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,982 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-213ENST00000637915 C1QTNF4Q9BXJ3 329 aa11.9□□□□□ -0.5
CTSD-213ENST00000637915 GCSHP23434 173 aa11.89□□□□□ -0.51
CTSD-213ENST00000637915 ZNF479Q96JC4 524 aa11.89□□□□□ -0.51
CTSD-213ENST00000637915 PYGO1Q9Y3Y4 419 aa11.89□□□□□ -0.51
CTSD-213ENST00000637915 PLAC8L1A1L4L8 177 aa11.88□□□□□ -0.51
CTSD-213ENST00000637915 FXYD2P54710 66 aa11.88□□□□□ -0.51
CTSD-213ENST00000637915 NFE4Q86UQ8 179 aa11.88□□□□□ -0.51
CTSD-213ENST00000637915 FAM104AQ969W3 186 aa11.88□□□□□ -0.51
CTSD-213ENST00000637915 CHCHD7Q9BUK0 85 aa11.88□□□□□ -0.51
CTSD-213ENST00000637915 HIVEP1P15822 2718 aa11.88□□□□□ -0.51
CTSD-213ENST00000637915 K7EP13 123 aa11.88□□□□□ -0.51
CTSD-213ENST00000637915 HERVK_113P61574 105 aa11.88□□□□□ -0.51
CTSD-213ENST00000637915 DAZ2Q13117 558 aaKnown RBP11.88□□□□□ -0.51
CTSD-213ENST00000637915 UBE2V1Q13404 147 aa11.88□□□□□ -0.51
CTSD-213ENST00000637915 C16orf74Q96GX8 76 aa11.88□□□□□ -0.51
CTSD-213ENST00000637915 NOP10Q9NPE3 64 aaKnown RBP11.88□□□□□ -0.51
CTSD-213ENST00000637915 IGHV3-38A0A0C4DH36 116 aa11.87□□□□□ -0.51
CTSD-213ENST00000637915 H3BRM9 83 aa11.87□□□□□ -0.51
CTSD-213ENST00000637915 CCL25O15444 150 aa11.87□□□□□ -0.51
CTSD-213ENST00000637915 VAMP3Q15836 100 aa11.87□□□□□ -0.51
CTSD-213ENST00000637915 TMEM170BQ5T4T1 132 aa11.87□□□□□ -0.51
CTSD-213ENST00000637915 PHLDA1Q8WV24 401 aaPredicted RBP11.87□□□□□ -0.51
CTSD-213ENST00000637915 FN1P02751 2386 aaKnown RBP11.87□□□□□ -0.51
CTSD-213ENST00000637915 TRAV4A0A0B4J268 109 aa11.87□□□□□ -0.51
CTSD-213ENST00000637915 FOSL1P15407 271 aa11.87□□□□□ -0.51
CTSD-213ENST00000637915 CEND1Q8N111 149 aa11.87□□□□□ -0.51
CTSD-213ENST00000637915 TM2D2Q9BX73 214 aa11.87□□□□□ -0.51
CTSD-213ENST00000637915 VCX2Q9H322 139 aa11.87□□□□□ -0.51
CTSD-213ENST00000637915 C2CD3Q4AC94 2353 aa11.86□□□□□ -0.51
CTSD-213ENST00000637915 PTTG1IPP53801 180 aa11.86□□□□□ -0.51
CTSD-213ENST00000637915 CEMP1Q6PRD7 247 aaPredicted RBP11.86□□□□□ -0.51
CTSD-213ENST00000637915 ZNF815PA8K554 130 aa11.85□□□□□ -0.51
CTSD-213ENST00000637915 CRLF1O75462 422 aa11.85□□□□□ -0.51
CTSD-213ENST00000637915 COTL1Q14019 142 aa11.85□□□□□ -0.51
CTSD-213ENST00000637915 TAL2Q16559 108 aa11.85□□□□□ -0.51
CTSD-213ENST00000637915 SPATA3Q8NHX4 192 aa11.85□□□□□ -0.51
CTSD-213ENST00000637915 AMELXQ99217 191 aa11.85□□□□□ -0.51
CTSD-213ENST00000637915 VWFP04275 2813 aa11.85□□□□□ -0.51
CTSD-213ENST00000637915 UBE2D4Q9Y2X8 147 aa11.85□□□□□ -0.51
CTSD-213ENST00000637915 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.84□□□□□ -0.51
CTSD-213ENST00000637915 IGKV2-29A2NJV5 120 aaPredicted RBP11.84□□□□□ -0.51
CTSD-213ENST00000637915 K7EQD1 137 aa11.84□□□□□ -0.51
CTSD-213ENST00000637915 CRYBA4P53673 196 aa11.84□□□□□ -0.51
CTSD-213ENST00000637915 RRN3P1Q2M238 152 aa11.84□□□□□ -0.51
CTSD-213ENST00000637915 TRBV7-3A0A075B6L6 115 aa11.83□□□□□ -0.52
CTSD-213ENST00000637915 A0A0J9YXV3 536 aa11.83□□□□□ -0.52
CTSD-213ENST00000637915 C9orf118A6NHY6 69 aa11.83□□□□□ -0.52
CTSD-213ENST00000637915 TSPEAR-AS2P59090 65 aa11.83□□□□□ -0.52
CTSD-213ENST00000637915 AMMECR1LQ6DCA0 310 aa11.83□□□□□ -0.52
CTSD-213ENST00000637915 HIST1H4GQ99525 98 aa11.83□□□□□ -0.52
CTSD-213ENST00000637915 SPANXA1Q9NS26 97 aa11.83□□□□□ -0.52
CTSD-213ENST00000637915 TRBV10-1A0A0K0K1A3 114 aa11.83□□□□□ -0.52
CTSD-213ENST00000637915 ZNF22P17026 224 aaPredicted RBP11.83□□□□□ -0.52
CTSD-213ENST00000637915 RAB37Q96AX2 223 aa11.83□□□□□ -0.52
CTSD-213ENST00000637915 PLEKHB2Q96CS7 222 aa11.83□□□□□ -0.52
CTSD-213ENST00000637915 TENM1Q9UKZ4 2725 aa11.83□□□□□ -0.52
CTSD-213ENST00000637915 TMEM223A0PJW6 202 aa11.82□□□□□ -0.52
CTSD-213ENST00000637915 INSL3P51460 131 aa11.82□□□□□ -0.52
CTSD-213ENST00000637915 SLC25A29Q8N8R3 303 aa11.82□□□□□ -0.52
CTSD-213ENST00000637915 OVOL2Q9BRP0 275 aa11.82□□□□□ -0.52
CTSD-213ENST00000637915 GAGE12BA1L429 117 aa11.81□□□□□ -0.52
CTSD-213ENST00000637915 GAGE7O76087 117 aa11.81□□□□□ -0.52
CTSD-213ENST00000637915 GAGE12FP0CL80 117 aa11.81□□□□□ -0.52
CTSD-213ENST00000637915 GAGE12GP0CL81 117 aa11.81□□□□□ -0.52
CTSD-213ENST00000637915 GAGE12IP0CL82 117 aa11.81□□□□□ -0.52
CTSD-213ENST00000637915 SMIM13P0DJ93 91 aa11.81□□□□□ -0.52
CTSD-213ENST00000637915 RNASE13Q5GAN3 156 aaKnown RBP11.81□□□□□ -0.52
CTSD-213ENST00000637915 RPL36AP83881 106 aaKnown RBP11.81□□□□□ -0.52
CTSD-213ENST00000637915 SCGB1D4Q6XE38 83 aa11.81□□□□□ -0.52
CTSD-213ENST00000637915 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.81□□□□□ -0.52
CTSD-213ENST00000637915 RPL36ALQ969Q0 106 aaKnown RBP11.81□□□□□ -0.52
CTSD-213ENST00000637915 NHP2Q9NX24 153 aaKnown RBP11.81□□□□□ -0.52
CTSD-213ENST00000637915 TRGV2A0A075B6R0 118 aa11.8□□□□□ -0.52
CTSD-213ENST00000637915 H3BUT2 72 aa11.8□□□□□ -0.52
CTSD-213ENST00000637915 K7ERJ3 54 aa11.8□□□□□ -0.52
CTSD-213ENST00000637915 MRPS36P82909 103 aaKnown RBP11.8□□□□□ -0.52
CTSD-213ENST00000637915 C9orf66Q5T8R8 295 aa11.8□□□□□ -0.52
CTSD-213ENST00000637915 J3QQQ9 107 aa11.79□□□□□ -0.52
CTSD-213ENST00000637915 Q6ZUT4 128 aa11.79□□□□□ -0.52
CTSD-213ENST00000637915 NAA38Q9BRA0 125 aaKnown RBP11.79□□□□□ -0.52
CTSD-213ENST00000637915 CITED1Q99966 193 aa11.79□□□□□ -0.52
CTSD-213ENST00000637915 LEPROTO15243 131 aa11.78□□□□□ -0.52
CTSD-213ENST00000637915 UBE2D3P61077 147 aa11.78□□□□□ -0.52
CTSD-213ENST00000637915 UBE2D2P62837 147 aa11.78□□□□□ -0.52
CTSD-213ENST00000637915 DAZ4Q86SG3 579 aaKnown RBP11.78□□□□□ -0.52
CTSD-213ENST00000637915 DAZ3Q9NR90 486 aaKnown RBP11.78□□□□□ -0.52
CTSD-213ENST00000637915 NOTCH3Q9UM47 2321 aa11.78□□□□□ -0.52
CTSD-213ENST00000637915 A0A0J9YY99 117 aa11.77□□□□□ -0.53
CTSD-213ENST00000637915 GAGE12JA6NER3 117 aa11.77□□□□□ -0.53
CTSD-213ENST00000637915 LGALS3P17931 250 aaKnown RBP11.77□□□□□ -0.53
CTSD-213ENST00000637915 GAGE4Q13068 117 aa11.77□□□□□ -0.53
CTSD-213ENST00000637915 GAGE5Q13069 117 aa11.77□□□□□ -0.53
CTSD-213ENST00000637915 GAGE13Q4V321 117 aa11.77□□□□□ -0.53
CTSD-213ENST00000637915 IGHV3-64A0A075B6Q5 118 aa11.76□□□□□ -0.53
CTSD-213ENST00000637915 CIDEAO60543 219 aa11.76□□□□□ -0.53
CTSD-213ENST00000637915 NTM-AS1Q6ZSK4 140 aa11.76□□□□□ -0.53
CTSD-213ENST00000637915 TIMM21Q9BVV7 248 aa11.76□□□□□ -0.53
CTSD-213ENST00000637915 TRBV6-4A0A1B0GX49 114 aa11.76□□□□□ -0.53
CTSD-213ENST00000637915 TINCRA0A1B0GVN0 87 aa11.75□□□□□ -0.53
CTSD-213ENST00000637915 A0A1W2PPM0 123 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms