RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 A0A0J9YY99 117 aa5.4□□□□□ -1.54
PNKP-229ENST00000637897 NBDYA0A0U1RRE5 68 aa5.4□□□□□ -1.54
PNKP-229ENST00000637897 LOC389332A0A1B0GUA5 103 aa5.4□□□□□ -1.54
PNKP-229ENST00000637897 SMKR1H3BMG3 65 aa5.4□□□□□ -1.54
PNKP-229ENST00000637897 NCR2O95944 276 aa5.4□□□□□ -1.54
PNKP-229ENST00000637897 NUDT3O95989 172 aa5.4□□□□□ -1.54
PNKP-229ENST00000637897 SMIM17P0DL12 118 aa5.4□□□□□ -1.54
PNKP-229ENST00000637897 DAZ2Q13117 558 aaKnown RBP5.4□□□□□ -1.54
PNKP-229ENST00000637897 ZNF664Q8N3J9 261 aa5.4□□□□□ -1.54
PNKP-229ENST00000637897 C9orf85Q96MD7 179 aa5.4□□□□□ -1.54
PNKP-229ENST00000637897 LINC00467Q9BRT7 94 aa5.4□□□□□ -1.54
PNKP-229ENST00000637897 VAMP8Q9BV40 100 aa5.4□□□□□ -1.54
PNKP-229ENST00000637897 MAP1LC3CQ9BXW4 147 aa5.4□□□□□ -1.54
PNKP-229ENST00000637897 A0A096LPF7 62 aa5.39□□□□□ -1.55
PNKP-229ENST00000637897 K7EMI3 77 aa5.39□□□□□ -1.55
PNKP-229ENST00000637897 HBDP02042 147 aa5.39□□□□□ -1.55
PNKP-229ENST00000637897 C1orf134Q5TEV5 83 aa5.39□□□□□ -1.55
PNKP-229ENST00000637897 PET117Q6UWS5 81 aa5.39□□□□□ -1.55
PNKP-229ENST00000637897 Q8N8P6 123 aa5.39□□□□□ -1.55
PNKP-229ENST00000637897 Q8N976 141 aa5.39□□□□□ -1.55
PNKP-229ENST00000637897 C18orf15Q96N68 181 aa5.39□□□□□ -1.55
PNKP-229ENST00000637897 C20orf78Q9BR46 151 aa5.39□□□□□ -1.55
PNKP-229ENST00000637897 LINC00587B1AMM8 73 aa5.38□□□□□ -1.55
PNKP-229ENST00000637897 SYS1-DBNDD2H3BUS1 97 aa5.38□□□□□ -1.55
PNKP-229ENST00000637897 DDTP30046 118 aa5.38□□□□□ -1.55
PNKP-229ENST00000637897 PIK3CD-AS1Q5SR53 167 aa5.38□□□□□ -1.55
PNKP-229ENST00000637897 Q6ZRN7 208 aaPredicted RBP5.38□□□□□ -1.55
PNKP-229ENST00000637897 SPATA12Q7Z6I5 190 aa5.38□□□□□ -1.55
PNKP-229ENST00000637897 C14orf178Q8N769 122 aaPredicted RBP5.38□□□□□ -1.55
PNKP-229ENST00000637897 NRACQ8N912 160 aa5.38□□□□□ -1.55
PNKP-229ENST00000637897 PRO1933Q9H354 126 aa5.38□□□□□ -1.55
PNKP-229ENST00000637897 Q9H8V8 135 aa5.38□□□□□ -1.55
PNKP-229ENST00000637897 MDFICQ9P1T7 246 aa5.38□□□□□ -1.55
PNKP-229ENST00000637897 DNAH8Q96JB1 4490 aa5.37□□□□□ -1.55
PNKP-229ENST00000637897 MGPP08493 103 aa5.37□□□□□ -1.55
PNKP-229ENST00000637897 FCER1GP30273 86 aa5.37□□□□□ -1.55
PNKP-229ENST00000637897 KRTAP10-2P60368 255 aa5.37□□□□□ -1.55
PNKP-229ENST00000637897 ZNF415Q09FC8 603 aa5.37□□□□□ -1.55
PNKP-229ENST00000637897 C6orf223Q8N319 242 aa5.37□□□□□ -1.55
PNKP-229ENST00000637897 PTH2Q96A98 100 aa5.37□□□□□ -1.55
PNKP-229ENST00000637897 UPK3BQ9BT76 320 aa5.37□□□□□ -1.55
PNKP-229ENST00000637897 MRPL16Q9NX20 251 aaKnown RBP5.37□□□□□ -1.55
PNKP-229ENST00000637897 KIF25-AS1Q9Y6Z4 181 aa5.37□□□□□ -1.55
PNKP-229ENST00000637897 TRAV9-2A0A087WT02 112 aa5.36□□□□□ -1.55
PNKP-229ENST00000637897 A0A096LNJ9 63 aa5.36□□□□□ -1.55
PNKP-229ENST00000637897 TRAV26-2A0A0B4J265 109 aa5.36□□□□□ -1.55
PNKP-229ENST00000637897 H3BNG1 76 aa5.36□□□□□ -1.55
PNKP-229ENST00000637897 GAS8-AS1O95177 125 aa5.36□□□□□ -1.55
PNKP-229ENST00000637897 GATA1P15976 413 aaPredicted RBP5.36□□□□□ -1.55
PNKP-229ENST00000637897 G0S2P27469 103 aa5.36□□□□□ -1.55
PNKP-229ENST00000637897 LINC00315P59091 139 aa5.36□□□□□ -1.55
PNKP-229ENST00000637897 SUMO2P61956 95 aaKnown RBP5.36□□□□□ -1.55
PNKP-229ENST00000637897 RPL32P62910 135 aaKnown RBP5.36□□□□□ -1.55
PNKP-229ENST00000637897 FHL2Q14192 279 aa5.36□□□□□ -1.55
PNKP-229ENST00000637897 LAGE3Q14657 143 aa5.36□□□□□ -1.55
PNKP-229ENST00000637897 LINC00173Q6ZV60 143 aa5.36□□□□□ -1.55
PNKP-229ENST00000637897 RASL10AQ92737 203 aa5.36□□□□□ -1.55
PNKP-229ENST00000637897 SPXQ9BT56 116 aa5.36□□□□□ -1.55
PNKP-229ENST00000637897 SMIM2Q9BVW6 85 aa5.36□□□□□ -1.55
PNKP-229ENST00000637897 MRPS16Q9Y3D3 137 aaKnown RBP5.36□□□□□ -1.55
PNKP-229ENST00000637897 PAM16Q9Y3D7 125 aa5.36□□□□□ -1.55
PNKP-229ENST00000637897 TNFRSF18Q9Y5U5 241 aa5.36□□□□□ -1.55
PNKP-229ENST00000637897 TRGV1A0A0A0MS02 117 aa5.35□□□□□ -1.55
PNKP-229ENST00000637897 LINC01549A6NIU2 74 aa5.35□□□□□ -1.55
PNKP-229ENST00000637897 M0R2P5 195 aa5.35□□□□□ -1.55
PNKP-229ENST00000637897 ATP5LO75964 103 aa5.35□□□□□ -1.55
PNKP-229ENST00000637897 IGHV3-53P01767 116 aa5.35□□□□□ -1.55
PNKP-229ENST00000637897 FUSP35637 526 aaKnown RBP eCLIP5.35□□□□□ -1.55
PNKP-229ENST00000637897 CCL18P55774 89 aa5.35□□□□□ -1.55
PNKP-229ENST00000637897 ZNF876PQ49A33 203 aa5.35□□□□□ -1.55
PNKP-229ENST00000637897 SPATA45Q537H7 98 aa5.35□□□□□ -1.55
PNKP-229ENST00000637897 ORMDL2Q53FV1 153 aa5.35□□□□□ -1.55
PNKP-229ENST00000637897 LINC01545Q5VT33 79 aa5.35□□□□□ -1.55
PNKP-229ENST00000637897 SVIPQ8NHG7 77 aa5.35□□□□□ -1.55
PNKP-229ENST00000637897 IFI27L1Q96BM0 104 aa5.35□□□□□ -1.55
PNKP-229ENST00000637897 MIEN1Q9BRT3 115 aa5.35□□□□□ -1.55
PNKP-229ENST00000637897 ST20Q9HBF5 79 aa5.35□□□□□ -1.55
PNKP-229ENST00000637897 TRBV6-5A0A0K0K1A5 114 aa5.34□□□□□ -1.55
PNKP-229ENST00000637897 A8MWV9 139 aa5.34□□□□□ -1.55
PNKP-229ENST00000637897 HSBP1L1C9JCN9 74 aa5.34□□□□□ -1.55
PNKP-229ENST00000637897 F5H697 171 aa5.34□□□□□ -1.55
PNKP-229ENST00000637897 H7C1H1 209 aa5.34□□□□□ -1.55
PNKP-229ENST00000637897 CRYGDP07320 174 aa5.34□□□□□ -1.55
PNKP-229ENST00000637897 CRYBA4P53673 196 aa5.34□□□□□ -1.55
PNKP-229ENST00000637897 SUMO4Q6EEV6 95 aa5.34□□□□□ -1.55
PNKP-229ENST00000637897 ZNF479Q96JC4 524 aa5.34□□□□□ -1.55
PNKP-229ENST00000637897 A0A087WWL8 130 aa5.33□□□□□ -1.56
PNKP-229ENST00000637897 RHODO00212 210 aa5.33□□□□□ -1.56
PNKP-229ENST00000637897 VCYO14598 125 aa5.33□□□□□ -1.56
PNKP-229ENST00000637897 TCAPO15273 167 aa5.33□□□□□ -1.56
PNKP-229ENST00000637897 ZNF56Q15929 161 aa5.33□□□□□ -1.56
PNKP-229ENST00000637897 LYPD5Q6UWN5 251 aa5.33□□□□□ -1.56
PNKP-229ENST00000637897 MRPL52Q86TS9 123 aaKnown RBP5.33□□□□□ -1.56
PNKP-229ENST00000637897 ATOH7Q8N100 152 aa5.33□□□□□ -1.56
PNKP-229ENST00000637897 RPL39LQ96EH5 51 aaKnown RBP5.33□□□□□ -1.56
PNKP-229ENST00000637897 JPT2Q9H910 190 aa5.33□□□□□ -1.56
PNKP-229ENST00000637897 UQCR10Q9UDW1 63 aa5.33□□□□□ -1.56
PNKP-229ENST00000637897 TRGV2A0A075B6R0 118 aa5.32□□□□□ -1.56
PNKP-229ENST00000637897 LOC100131303A0A0U1RQF7 123 aa5.32□□□□□ -1.56
PNKP-229ENST00000637897 H0Y8G0 127 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms