RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 CLRN3Q8NCR9 226 aa12.95□□□□□ -0.34
CLN6-222ENST00000637667 GFRA4Q9GZZ7 299 aa12.95□□□□□ -0.34
CLN6-222ENST00000637667 RNASE7Q9H1E1 156 aaKnown RBP12.95□□□□□ -0.34
CLN6-222ENST00000637667 K7EN84 100 aa12.94□□□□□ -0.34
CLN6-222ENST00000637667 COTL1Q14019 142 aa12.94□□□□□ -0.34
CLN6-222ENST00000637667 OCC1Q8TAD7 63 aa12.94□□□□□ -0.34
CLN6-222ENST00000637667 UBE2L6O14933 153 aa12.93□□□□□ -0.34
CLN6-222ENST00000637667 AMTP48728 403 aa12.93□□□□□ -0.34
CLN6-222ENST00000637667 LRP1Q07954 4544 aaKnown RBP12.92□□□□□ -0.34
CLN6-222ENST00000637667 GATD1Q8NB37 220 aa12.92□□□□□ -0.34
CLN6-222ENST00000637667 TRAV26-2A0A0B4J265 109 aa12.91□□□□□ -0.34
CLN6-222ENST00000637667 hDV102S1A0JD36 115 aa12.91□□□□□ -0.34
CLN6-222ENST00000637667 CNBPP62633 177 aaKnown RBP12.91□□□□□ -0.34
CLN6-222ENST00000637667 SDIM1Q6ZPB5 146 aa12.91□□□□□ -0.34
CLN6-222ENST00000637667 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.91□□□□□ -0.34
CLN6-222ENST00000637667 RPL37AP61513 92 aaKnown RBP12.9□□□□□ -0.34
CLN6-222ENST00000637667 GTSF1Q8WW33 167 aa12.9□□□□□ -0.34
CLN6-222ENST00000637667 Q6ZNX1 250 aa12.89□□□□□ -0.35
CLN6-222ENST00000637667 TMEM250H0YL14 139 aa12.88□□□□□ -0.35
CLN6-222ENST00000637667 PANO1I0J062 215 aa12.88□□□□□ -0.35
CLN6-222ENST00000637667 BLOC1S1P78537 153 aa12.88□□□□□ -0.35
CLN6-222ENST00000637667 SMIM15Q7Z3B0 74 aa12.88□□□□□ -0.35
CLN6-222ENST00000637667 AP5S1Q9NUS5 200 aa12.88□□□□□ -0.35
CLN6-222ENST00000637667 FOXA3P55318 350 aaPredicted RBP12.87□□□□□ -0.35
CLN6-222ENST00000637667 ALKAL2Q6UX46 152 aa12.87□□□□□ -0.35
CLN6-222ENST00000637667 RPL39LQ96EH5 51 aaKnown RBP12.87□□□□□ -0.35
CLN6-222ENST00000637667 GATCO43716 136 aaKnown RBP12.86□□□□□ -0.35
CLN6-222ENST00000637667 OXTP01178 125 aa12.86□□□□□ -0.35
CLN6-222ENST00000637667 AKAP14Q86UN6 197 aa12.86□□□□□ -0.35
CLN6-222ENST00000637667 FAT3Q8TDW7 4589 aa12.86□□□□□ -0.35
CLN6-222ENST00000637667 NCR2O95944 276 aa12.85□□□□□ -0.35
CLN6-222ENST00000637667 SLPIP03973 132 aa12.85□□□□□ -0.35
CLN6-222ENST00000637667 TEX261Q6UWH6 196 aa12.85□□□□□ -0.35
CLN6-222ENST00000637667 FAM231DQ6ZW35 169 aa12.85□□□□□ -0.35
CLN6-222ENST00000637667 IGHV3-64A0A075B6Q5 118 aa12.84□□□□□ -0.35
CLN6-222ENST00000637667 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.84□□□□□ -0.35
CLN6-222ENST00000637667 GAGE12HA6NDE8 117 aa12.84□□□□□ -0.35
CLN6-222ENST00000637667 A8MWL6 223 aa12.84□□□□□ -0.35
CLN6-222ENST00000637667 CIRBPQ14011 172 aaKnown RBP12.84□□□□□ -0.35
CLN6-222ENST00000637667 AMMECR1LQ6DCA0 310 aa12.84□□□□□ -0.35
CLN6-222ENST00000637667 LYPD6BQ8NI32 183 aa12.84□□□□□ -0.35
CLN6-222ENST00000637667 IGKV3OR2-268A0A0C4DH90 116 aa12.83□□□□□ -0.36
CLN6-222ENST00000637667 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.82□□□□□ -0.36
CLN6-222ENST00000637667 IGKV2-29A2NJV5 120 aaPredicted RBP12.82□□□□□ -0.36
CLN6-222ENST00000637667 SDHAF1A6NFY7 115 aa12.82□□□□□ -0.36
CLN6-222ENST00000637667 APCSP02743 223 aa12.82□□□□□ -0.36
CLN6-222ENST00000637667 HNRNPA3P51991 378 aaKnown RBP12.82□□□□□ -0.36
CLN6-222ENST00000637667 CEBPGP53567 150 aa12.82□□□□□ -0.36
CLN6-222ENST00000637667 CT83Q5H943 113 aa12.82□□□□□ -0.36
CLN6-222ENST00000637667 RNASEKQ6P5S7 137 aaKnown RBP12.82□□□□□ -0.36
CLN6-222ENST00000637667 CFAP161Q6P656 301 aa12.82□□□□□ -0.36
CLN6-222ENST00000637667 C15orf56Q8N910 161 aa12.82□□□□□ -0.36
CLN6-222ENST00000637667 PKHD1L1Q86WI1 4243 aa12.81□□□□□ -0.36
CLN6-222ENST00000637667 hCG_2014768A0A024R1R8 64 aa12.81□□□□□ -0.36
CLN6-222ENST00000637667 H7C423 109 aa12.81□□□□□ -0.36
CLN6-222ENST00000637667 FGF6P10767 208 aa12.8□□□□□ -0.36
CLN6-222ENST00000637667 CHCHD10Q8WYQ3 142 aaPredicted RBP12.8□□□□□ -0.36
CLN6-222ENST00000637667 TRBV6-5A0A0K0K1A5 114 aa12.79□□□□□ -0.36
CLN6-222ENST00000637667 CHTF8P0CG12 524 aa12.79□□□□□ -0.36
CLN6-222ENST00000637667 DPH3Q96FX2 82 aa12.79□□□□□ -0.36
CLN6-222ENST00000637667 RNF185Q96GF1 192 aa12.79□□□□□ -0.36
CLN6-222ENST00000637667 I3L3M4 83 aa12.78□□□□□ -0.36
CLN6-222ENST00000637667 PMCHP20382 165 aa12.78□□□□□ -0.36
CLN6-222ENST00000637667 SPACA4Q8TDM5 124 aa12.78□□□□□ -0.36
CLN6-222ENST00000637667 BORCS7Q96B45 105 aa12.78□□□□□ -0.36
CLN6-222ENST00000637667 SMIM7Q9BQ49 75 aa12.78□□□□□ -0.36
CLN6-222ENST00000637667 A0A087WYN8 130 aa12.77□□□□□ -0.37
CLN6-222ENST00000637667 FAM231BA6NCW3 169 aa12.77□□□□□ -0.37
CLN6-222ENST00000637667 HIGD2BQ4VC39 106 aa12.77□□□□□ -0.37
CLN6-222ENST00000637667 SERTAD4-AS1Q5TG53 156 aa12.77□□□□□ -0.37
CLN6-222ENST00000637667 LINC01551Q86U37 167 aa12.77□□□□□ -0.37
CLN6-222ENST00000637667 TSKUQ8WUA8 353 aa12.77□□□□□ -0.37
CLN6-222ENST00000637667 EIF5A2Q9GZV4 153 aaKnown RBP12.77□□□□□ -0.37
CLN6-222ENST00000637667 A0A1B0GUT8 65 aa12.76□□□□□ -0.37
CLN6-222ENST00000637667 HIGD1CA8MV81 97 aa12.76□□□□□ -0.37
CLN6-222ENST00000637667 NDUFS6O75380 124 aaKnown RBP12.76□□□□□ -0.37
CLN6-222ENST00000637667 GAS8-AS1O95177 125 aa12.76□□□□□ -0.37
CLN6-222ENST00000637667 ZNF25P17030 456 aaPredicted RBP12.76□□□□□ -0.37
CLN6-222ENST00000637667 RPS10P46783 165 aaKnown RBP12.76□□□□□ -0.37
CLN6-222ENST00000637667 BTF3L4Q96K17 158 aa12.75□□□□□ -0.37
CLN6-222ENST00000637667 TMEM191AQ9H0A3 160 aa12.75□□□□□ -0.37
CLN6-222ENST00000637667 ST20Q9HBF5 79 aa12.75□□□□□ -0.37
CLN6-222ENST00000637667 GVQW2A0A096LPI5 108 aaPredicted RBP12.74□□□□□ -0.37
CLN6-222ENST00000637667 ZNF727A8MUV8 499 aa12.74□□□□□ -0.37
CLN6-222ENST00000637667 TSHBP01222 138 aa12.74□□□□□ -0.37
CLN6-222ENST00000637667 ESDP10768 282 aa12.74□□□□□ -0.37
CLN6-222ENST00000637667 FOXI1Q12951 378 aa12.74□□□□□ -0.37
CLN6-222ENST00000637667 OR5A1Q8NGJ0 315 aa12.74□□□□□ -0.37
CLN6-222ENST00000637667 TMEM101Q96IK0 257 aa12.74□□□□□ -0.37
CLN6-222ENST00000637667 FAM210AQ96ND0 272 aa12.74□□□□□ -0.37
CLN6-222ENST00000637667 OSTCQ9NRP0 149 aa12.74□□□□□ -0.37
CLN6-222ENST00000637667 TMEM242Q9NWH2 141 aa12.74□□□□□ -0.37
CLN6-222ENST00000637667 PLAC8Q9NZF1 115 aa12.74□□□□□ -0.37
CLN6-222ENST00000637667 COX6A2Q02221 97 aa12.73□□□□□ -0.37
CLN6-222ENST00000637667 HMCN2Q8NDA2 5059 aa12.73□□□□□ -0.37
CLN6-222ENST00000637667 SRP19P09132 144 aaKnown RBP12.72□□□□□ -0.37
CLN6-222ENST00000637667 XCL1P47992 114 aa12.72□□□□□ -0.37
CLN6-222ENST00000637667 MRAP2Q96G30 205 aa12.72□□□□□ -0.37
CLN6-222ENST00000637667 RAB4AP20338 218 aa12.71□□□□□ -0.37
CLN6-222ENST00000637667 POLR2KP53803 58 aaKnown RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms