RNA–Protein interactions for RNA: ENST00000637158.1

CTSD-209, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,200 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-209ENST00000637158 NDUFS6O75380 124 aaKnown RBP11.52□□□□□ -0.57
CTSD-209ENST00000637158 COTL1Q14019 142 aa11.52□□□□□ -0.57
CTSD-209ENST00000637158 SMIM12Q96EX1 92 aa11.52□□□□□ -0.57
CTSD-209ENST00000637158 GFRA4Q9GZZ7 299 aa11.52□□□□□ -0.57
CTSD-209ENST00000637158 MANBALQ9NQG1 85 aa11.52□□□□□ -0.57
CTSD-209ENST00000637158 AMTP48728 403 aa11.51□□□□□ -0.57
CTSD-209ENST00000637158 COX6A2Q02221 97 aa11.51□□□□□ -0.57
CTSD-209ENST00000637158 LINC01600Q96MT4 127 aa11.51□□□□□ -0.57
CTSD-209ENST00000637158 EIF5AP63241 154 aaKnown RBP11.5□□□□□ -0.57
CTSD-209ENST00000637158 GTSF1Q8WW33 167 aa11.5□□□□□ -0.57
CTSD-209ENST00000637158 C11orf52Q96A22 123 aa11.5□□□□□ -0.57
CTSD-209ENST00000637158 GAGE12HA6NDE8 117 aa11.49□□□□□ -0.57
CTSD-209ENST00000637158 MAJINQ3KP22 176 aa11.49□□□□□ -0.57
CTSD-209ENST00000637158 CENPWQ5EE01 88 aa11.49□□□□□ -0.57
CTSD-209ENST00000637158 C15orf56Q8N910 161 aa11.49□□□□□ -0.57
CTSD-209ENST00000637158 BIN3Q9NQY0 253 aa11.49□□□□□ -0.57
CTSD-209ENST00000637158 PKIGQ9Y2B9 76 aa11.49□□□□□ -0.57
CTSD-209ENST00000637158 KANTRA0A1W2PQU2 76 aa11.48□□□□□ -0.57
CTSD-209ENST00000637158 C19orf71A6NCJ1 209 aa11.48□□□□□ -0.57
CTSD-209ENST00000637158 IFNA1P01562 189 aa11.48□□□□□ -0.57
CTSD-209ENST00000637158 NTF3P20783 257 aa11.48□□□□□ -0.57
CTSD-209ENST00000637158 HMSDA8MTL9 139 aa11.47□□□□□ -0.57
CTSD-209ENST00000637158 GNG4P50150 75 aa11.47□□□□□ -0.57
CTSD-209ENST00000637158 CCL20P78556 96 aa11.47□□□□□ -0.57
CTSD-209ENST00000637158 LYZL1Q6UWQ5 148 aa11.47□□□□□ -0.57
CTSD-209ENST00000637158 GNG13Q9P2W3 67 aa11.47□□□□□ -0.57
CTSD-209ENST00000637158 LINC00474Q9P2X8 69 aa11.47□□□□□ -0.57
CTSD-209ENST00000637158 TEX46H3BTG2 121 aa11.46□□□□□ -0.57
CTSD-209ENST00000637158 PRR3P79522 188 aaKnown RBP11.46□□□□□ -0.57
CTSD-209ENST00000637158 AMMECR1LQ6DCA0 310 aa11.46□□□□□ -0.57
CTSD-209ENST00000637158 C9orf62Q8N4C0 152 aa11.46□□□□□ -0.57
CTSD-209ENST00000637158 STPG4Q8N801 248 aa11.46□□□□□ -0.57
CTSD-209ENST00000637158 PRSS3P2Q8NHM4 247 aa11.46□□□□□ -0.57
CTSD-209ENST00000637158 GVQW2A0A096LPI5 108 aaPredicted RBP11.45□□□□□ -0.58
CTSD-209ENST00000637158 IGKV2-24A0A0C4DH68 120 aa11.45□□□□□ -0.58
CTSD-209ENST00000637158 IGKV3OR2-268A0A0C4DH90 116 aa11.45□□□□□ -0.58
CTSD-209ENST00000637158 H7C423 109 aa11.45□□□□□ -0.58
CTSD-209ENST00000637158 BCL2L11O43521 198 aa11.45□□□□□ -0.58
CTSD-209ENST00000637158 NCR2O95944 276 aa11.45□□□□□ -0.58
CTSD-209ENST00000637158 HIGD2BQ4VC39 106 aa11.45□□□□□ -0.58
CTSD-209ENST00000637158 CHCHD10Q8WYQ3 142 aaPredicted RBP11.45□□□□□ -0.58
CTSD-209ENST00000637158 TRAV1-1A0A0B4J248 108 aa11.44□□□□□ -0.58
CTSD-209ENST00000637158 SMLR1H3BR10 107 aa11.44□□□□□ -0.58
CTSD-209ENST00000637158 REG3GQ6UW15 175 aa11.44□□□□□ -0.58
CTSD-209ENST00000637158 SPINK6Q6UWN8 80 aa11.44□□□□□ -0.58
CTSD-209ENST00000637158 A0A0J9YXV3 536 aa11.43□□□□□ -0.58
CTSD-209ENST00000637158 PDE6DO43924 150 aa11.43□□□□□ -0.58
CTSD-209ENST00000637158 TWIST1Q15672 202 aa11.43□□□□□ -0.58
CTSD-209ENST00000637158 RGS21Q2M5E4 152 aa11.43□□□□□ -0.58
CTSD-209ENST00000637158 RAB19A4D1S5 217 aa11.42□□□□□ -0.58
CTSD-209ENST00000637158 RNASEKQ6P5S7 137 aaKnown RBP11.42□□□□□ -0.58
CTSD-209ENST00000637158 TEX261Q6UWH6 196 aa11.42□□□□□ -0.58
CTSD-209ENST00000637158 LYPD6BQ8NI32 183 aa11.42□□□□□ -0.58
CTSD-209ENST00000637158 CNFNQ9BYD5 112 aa11.42□□□□□ -0.58
CTSD-209ENST00000637158 CTRLP40313 264 aa11.41□□□□□ -0.58
CTSD-209ENST00000637158 MEF2BQ02080 365 aaPredicted RBP11.41□□□□□ -0.58
CTSD-209ENST00000637158 SMIM15Q7Z3B0 74 aa11.41□□□□□ -0.58
CTSD-209ENST00000637158 GATD1Q8NB37 220 aa11.41□□□□□ -0.58
CTSD-209ENST00000637158 APCSP02743 223 aa11.4□□□□□ -0.58
CTSD-209ENST00000637158 ZNF25P17030 456 aaPredicted RBP11.4□□□□□ -0.58
CTSD-209ENST00000637158 EIF5AL1Q6IS14 154 aaKnown RBP11.4□□□□□ -0.58
CTSD-209ENST00000637158 MED9Q9NWA0 146 aa11.4□□□□□ -0.58
CTSD-209ENST00000637158 A0A096LNI7 61 aa11.39□□□□□ -0.59
CTSD-209ENST00000637158 NUDT10Q8NFP7 164 aa11.39□□□□□ -0.59
CTSD-209ENST00000637158 NUDT11Q96G61 164 aa11.39□□□□□ -0.59
CTSD-209ENST00000637158 BTF3L4Q96K17 158 aa11.39□□□□□ -0.59
CTSD-209ENST00000637158 FGF6P10767 208 aa11.38□□□□□ -0.59
CTSD-209ENST00000637158 KRTAP10-8P60410 259 aa11.38□□□□□ -0.59
CTSD-209ENST00000637158 FOXI1Q12951 378 aa11.38□□□□□ -0.59
CTSD-209ENST00000637158 Q6ZNX1 250 aa11.38□□□□□ -0.59
CTSD-209ENST00000637158 Q6ZRP5 223 aa11.38□□□□□ -0.59
CTSD-209ENST00000637158 OR5A1Q8NGJ0 315 aa11.38□□□□□ -0.59
CTSD-209ENST00000637158 TMEM101Q96IK0 257 aa11.38□□□□□ -0.59
CTSD-209ENST00000637158 TRBV20OR9-2A0A075B6H5 130 aa11.37□□□□□ -0.59
CTSD-209ENST00000637158 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.37□□□□□ -0.59
CTSD-209ENST00000637158 TRAV26-2A0A0B4J265 109 aa11.37□□□□□ -0.59
CTSD-209ENST00000637158 IGHV1-58A0A0C4DH39 117 aa11.37□□□□□ -0.59
CTSD-209ENST00000637158 IGKV2-29A2NJV5 120 aaPredicted RBP11.37□□□□□ -0.59
CTSD-209ENST00000637158 FAM210AQ96ND0 272 aa11.37□□□□□ -0.59
CTSD-209ENST00000637158 RPP21Q9H633 154 aaKnown RBP11.36□□□□□ -0.59
CTSD-209ENST00000637158 SDHAF1A6NFY7 115 aa11.35□□□□□ -0.59
CTSD-209ENST00000637158 XCL1P47992 114 aa11.35□□□□□ -0.59
CTSD-209ENST00000637158 RPL39LQ96EH5 51 aaKnown RBP11.35□□□□□ -0.59
CTSD-209ENST00000637158 CARD19Q96LW7 228 aa11.35□□□□□ -0.59
CTSD-209ENST00000637158 I3L3M4 83 aa11.34□□□□□ -0.59
CTSD-209ENST00000637158 ZNF561-AS1K7EIQ3 104 aa11.34□□□□□ -0.59
CTSD-209ENST00000637158 PMCHP20382 165 aa11.34□□□□□ -0.59
CTSD-209ENST00000637158 TAGLN2P37802 199 aaKnown RBP11.34□□□□□ -0.59
CTSD-209ENST00000637158 SRSF9Q13242 221 aaKnown RBP eCLIP11.34□□□□□ -0.59
CTSD-209ENST00000637158 LINC00959A0A1B0GUT2 108 aa11.33□□□□□ -0.6
CTSD-209ENST00000637158 CCL25O15444 150 aa11.33□□□□□ -0.6
CTSD-209ENST00000637158 BCL2P10415 239 aa11.33□□□□□ -0.6
CTSD-209ENST00000637158 SS18Q15532 418 aa11.33□□□□□ -0.6
CTSD-209ENST00000637158 SYCNQ0VAF6 134 aa11.32□□□□□ -0.6
CTSD-209ENST00000637158 ISOC2Q96AB3 205 aa11.32□□□□□ -0.6
CTSD-209ENST00000637158 RNASE7Q9H1E1 156 aaKnown RBP11.32□□□□□ -0.6
CTSD-209ENST00000637158 TRBV6-5A0A0K0K1A5 114 aa11.31□□□□□ -0.6
CTSD-209ENST00000637158 CD164L2Q6UWJ8 174 aa11.31□□□□□ -0.6
CTSD-209ENST00000637158 MRAP2Q96G30 205 aa11.3□□□□□ -0.6
CTSD-209ENST00000637158 FAM231BA6NCW3 169 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms