RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 TNRC6AQ8NDV7 1962 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-227ENST00000636549 PRORYQ9H606 182 aa13.48□□□□□ -0.25
CACNA1A-227ENST00000636549 FXYD2P54710 66 aa13.47□□□□□ -0.25
CACNA1A-227ENST00000636549 GDF5OSQ5U4N7 250 aa13.47□□□□□ -0.25
CACNA1A-227ENST00000636549 ENHOQ6UWT2 76 aa13.47□□□□□ -0.25
CACNA1A-227ENST00000636549 NCOA6Q14686 2063 aaPredicted RBP13.47□□□□□ -0.25
CACNA1A-227ENST00000636549 MED13Q9UHV7 2174 aa13.46□□□□□ -0.25
CACNA1A-227ENST00000636549 A6NDX4 124 aa13.46□□□□□ -0.25
CACNA1A-227ENST00000636549 SHISA2Q6UWI4 295 aa13.46□□□□□ -0.25
CACNA1A-227ENST00000636549 TMEM131Q92545 1883 aa13.46□□□□□ -0.25
CACNA1A-227ENST00000636549 IGLV2-14P01704 120 aa13.46□□□□□ -0.25
CACNA1A-227ENST00000636549 LOXL1Q08397 574 aaPredicted RBP13.46□□□□□ -0.25
CACNA1A-227ENST00000636549 C20orf173Q96LM9 149 aa13.45□□□□□ -0.26
CACNA1A-227ENST00000636549 ZFAND3Q9H8U3 227 aa13.45□□□□□ -0.26
CACNA1A-227ENST00000636549 BRI3O95415 125 aa13.45□□□□□ -0.26
CACNA1A-227ENST00000636549 INSL3P51460 131 aa13.45□□□□□ -0.26
CACNA1A-227ENST00000636549 A0A1W2PNU3 283 aaPredicted RBP13.44□□□□□ -0.26
CACNA1A-227ENST00000636549 NUPR1O60356 82 aa13.44□□□□□ -0.26
CACNA1A-227ENST00000636549 A8MZ25 164 aa13.44□□□□□ -0.26
CACNA1A-227ENST00000636549 SNURFQ9Y675 71 aa13.44□□□□□ -0.26
CACNA1A-227ENST00000636549 CXCL5P42830 114 aa13.44□□□□□ -0.26
CACNA1A-227ENST00000636549 DAZAP2Q15038 168 aaPredicted RBP13.44□□□□□ -0.26
CACNA1A-227ENST00000636549 TDRG1Q3Y452 100 aa13.44□□□□□ -0.26
CACNA1A-227ENST00000636549 Q6YL49 198 aa13.43□□□□□ -0.26
CACNA1A-227ENST00000636549 C1orf147Q96MC9 270 aaPredicted RBP13.43□□□□□ -0.26
CACNA1A-227ENST00000636549 SERP1Q9Y6X1 66 aa13.43□□□□□ -0.26
CACNA1A-227ENST00000636549 A0A0J9YX75 114 aa13.43□□□□□ -0.26
CACNA1A-227ENST00000636549 ODF3L1Q8IXM7 274 aa13.42□□□□□ -0.26
CACNA1A-227ENST00000636549 KPRPQ5T749 579 aaPredicted RBP13.42□□□□□ -0.26
CACNA1A-227ENST00000636549 TRAV10A0A0B4J240 114 aa13.42□□□□□ -0.26
CACNA1A-227ENST00000636549 IGHV1-58A0A0C4DH39 117 aa13.42□□□□□ -0.26
CACNA1A-227ENST00000636549 Q8NA96 180 aa13.41□□□□□ -0.26
CACNA1A-227ENST00000636549 NCOR1P1Q9H4R4 102 aa13.41□□□□□ -0.26
CACNA1A-227ENST00000636549 ANAPC1Q9H1A4 1944 aa13.41□□□□□ -0.26
CACNA1A-227ENST00000636549 IGLV5-52A0A0A0MRZ9 124 aa13.41□□□□□ -0.26
CACNA1A-227ENST00000636549 SIP14410 1827 aa13.41□□□□□ -0.26
CACNA1A-227ENST00000636549 C20orf144Q9BQM9 153 aa13.4□□□□□ -0.26
CACNA1A-227ENST00000636549 FRMD6-AS1P0C7T7 363 aa13.4□□□□□ -0.26
CACNA1A-227ENST00000636549 TEN1Q86WV5 123 aa13.4□□□□□ -0.26
CACNA1A-227ENST00000636549 UFSP1Q6NVU6 142 aa13.4□□□□□ -0.26
CACNA1A-227ENST00000636549 PLXNA2O75051 1894 aa13.4□□□□□ -0.26
CACNA1A-227ENST00000636549 CCDC140Q96MF4 163 aa13.4□□□□□ -0.26
CACNA1A-227ENST00000636549 OBSL1O75147 1896 aa13.4□□□□□ -0.26
CACNA1A-227ENST00000636549 TANC1Q9C0D5 1861 aa13.39□□□□□ -0.27
CACNA1A-227ENST00000636549 Q6ZSV7 163 aa13.39□□□□□ -0.27
CACNA1A-227ENST00000636549 ATOX1O00244 68 aa13.39□□□□□ -0.27
CACNA1A-227ENST00000636549 DEFB114Q30KQ6 69 aa13.39□□□□□ -0.27
CACNA1A-227ENST00000636549 NOTCH4Q99466 2003 aa13.38□□□□□ -0.27
CACNA1A-227ENST00000636549 JMJD7-PLA2G4BH0Y9G9 81 aa13.38□□□□□ -0.27
CACNA1A-227ENST00000636549 NDUFV3P56181 108 aaKnown RBP13.38□□□□□ -0.27
CACNA1A-227ENST00000636549 SYCNQ0VAF6 134 aa13.37□□□□□ -0.27
CACNA1A-227ENST00000636549 COL4A3Q01955 1670 aa13.37□□□□□ -0.27
CACNA1A-227ENST00000636549 PRYO14603 147 aa13.36□□□□□ -0.27
CACNA1A-227ENST00000636549 ZNF80P51504 273 aaPredicted RBP13.36□□□□□ -0.27
CACNA1A-227ENST00000636549 LENEPQ9Y5L5 61 aa13.36□□□□□ -0.27
CACNA1A-227ENST00000636549 KIR2DL5BA0A0G2JN68 375 aa13.36□□□□□ -0.27
CACNA1A-227ENST00000636549 KIR2DL5BA0A0G2JPC4 375 aa13.36□□□□□ -0.27
CACNA1A-227ENST00000636549 KIR2DL5AQ8N109 375 aa13.36□□□□□ -0.27
CACNA1A-227ENST00000636549 CCKP06307 115 aa13.36□□□□□ -0.27
CACNA1A-227ENST00000636549 NEXN-AS1Q8NBZ9 246 aa13.36□□□□□ -0.27
CACNA1A-227ENST00000636549 C20orf197Q8N268 126 aa13.35□□□□□ -0.27
CACNA1A-227ENST00000636549 PRR15LQ9BU68 103 aa13.35□□□□□ -0.27
CACNA1A-227ENST00000636549 DENND4CQ5VZ89 1909 aa13.35□□□□□ -0.27
CACNA1A-227ENST00000636549 KIAA1549Q9HCM3 1950 aa13.35□□□□□ -0.27
CACNA1A-227ENST00000636549 K7EMT4 169 aa13.35□□□□□ -0.27
CACNA1A-227ENST00000636549 IGFL2Q6UWQ7 119 aa13.34□□□□□ -0.27
CACNA1A-227ENST00000636549 RIF1Q5UIP0 2472 aaKnown RBP13.34□□□□□ -0.27
CACNA1A-227ENST00000636549 LYRM9A8MSI8 78 aa13.34□□□□□ -0.27
CACNA1A-227ENST00000636549 ODF1Q14990 250 aa13.34□□□□□ -0.27
CACNA1A-227ENST00000636549 NBASA2RRP1 2371 aa13.34□□□□□ -0.27
CACNA1A-227ENST00000636549 MSMPQ1L6U9 139 aa13.33□□□□□ -0.28
CACNA1A-227ENST00000636549 TCL1BO95988 128 aa13.33□□□□□ -0.28
CACNA1A-227ENST00000636549 DEFB116Q30KQ4 102 aa13.32□□□□□ -0.28
CACNA1A-227ENST00000636549 MED12LQ86YW9 2145 aa13.32□□□□□ -0.28
CACNA1A-227ENST00000636549 TAX1BP3O14907 124 aa13.32□□□□□ -0.28
CACNA1A-227ENST00000636549 PLA2G2AP14555 144 aa13.32□□□□□ -0.28
CACNA1A-227ENST00000636549 Q6ZS46 218 aa13.31□□□□□ -0.28
CACNA1A-227ENST00000636549 ESRGQ1W209 222 aa13.31□□□□□ -0.28
CACNA1A-227ENST00000636549 SERP2Q8N6R1 65 aa13.31□□□□□ -0.28
CACNA1A-227ENST00000636549 CDKN2A-AS1Q9UH64 79 aa13.31□□□□□ -0.28
CACNA1A-227ENST00000636549 MIAQ16674 131 aa13.31□□□□□ -0.28
CACNA1A-227ENST00000636549 LINC01556Q5JQF7 62 aa13.31□□□□□ -0.28
CACNA1A-227ENST00000636549 A0A0J9YXY3 114 aa13.3□□□□□ -0.28
CACNA1A-227ENST00000636549 SPTAN1Q13813 2472 aaKnown RBP13.3□□□□□ -0.28
CACNA1A-227ENST00000636549 IGHV6-1A0A0B4J1U7 121 aa13.3□□□□□ -0.28
CACNA1A-227ENST00000636549 C6orf99Q4VX62 202 aa13.3□□□□□ -0.28
CACNA1A-227ENST00000636549 NUP210Q8TEM1 1887 aaPredicted RBP13.3□□□□□ -0.28
CACNA1A-227ENST00000636549 H3BQ85 93 aa13.3□□□□□ -0.28
CACNA1A-227ENST00000636549 A6NED7 52 aa13.29□□□□□ -0.28
CACNA1A-227ENST00000636549 CFAP126Q5VTH2 177 aa13.29□□□□□ -0.28
CACNA1A-227ENST00000636549 TP73-AS1Q9UF72 201 aa13.29□□□□□ -0.28
CACNA1A-227ENST00000636549 TRBV6-8A0A0A6YYG3 113 aa13.29□□□□□ -0.28
CACNA1A-227ENST00000636549 E9PLD3 99 aa13.28□□□□□ -0.28
CACNA1A-227ENST00000636549 MALRD1Q5VYJ5 2156 aa13.28□□□□□ -0.28
CACNA1A-227ENST00000636549 C1orf137Q5JT78 98 aa13.28□□□□□ -0.28
CACNA1A-227ENST00000636549 SPATA12Q7Z6I5 190 aa13.28□□□□□ -0.28
CACNA1A-227ENST00000636549 C20orf203Q8NBC4 194 aa13.28□□□□□ -0.28
CACNA1A-227ENST00000636549 POU2AF1Q16633 256 aa13.28□□□□□ -0.28
CACNA1A-227ENST00000636549 CELA1Q9UNI1 258 aa13.27□□□□□ -0.28
CACNA1A-227ENST00000636549 EDN2P20800 178 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms