RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 WFDC11Q8NEX6 87 aa9.04□□□□□ -0.96
PTPN11-205ENST00000635625 LINC01587Q99440 93 aa9.04□□□□□ -0.96
PTPN11-205ENST00000635625 TSSC4Q9Y5U2 329 aaPredicted RBP9.04□□□□□ -0.96
PTPN11-205ENST00000635625 CCL24O00175 119 aa9.04□□□□□ -0.96
PTPN11-205ENST00000635625 P0DMU3 169 aa9.04□□□□□ -0.96
PTPN11-205ENST00000635625 FAM231AP0DMU4 169 aa9.04□□□□□ -0.96
PTPN11-205ENST00000635625 FAM231CP0DMU5 169 aa9.04□□□□□ -0.96
PTPN11-205ENST00000635625 C11orf72Q8NBR9 251 aa9.04□□□□□ -0.96
PTPN11-205ENST00000635625 RNASE8Q8TDE3 154 aaKnown RBP9.04□□□□□ -0.96
PTPN11-205ENST00000635625 SPANXA1Q9NS26 97 aa9.04□□□□□ -0.96
PTPN11-205ENST00000635625 LEPROTO15243 131 aa9.03□□□□□ -0.96
PTPN11-205ENST00000635625 RS1O15537 224 aa9.03□□□□□ -0.96
PTPN11-205ENST00000635625 IGHV3-53P01767 116 aa9.03□□□□□ -0.96
PTPN11-205ENST00000635625 TMEM170BQ5T4T1 132 aa9.03□□□□□ -0.96
PTPN11-205ENST00000635625 CFAP126Q5VTH2 177 aa9.03□□□□□ -0.96
PTPN11-205ENST00000635625 STHQ8IWL8 128 aa9.03□□□□□ -0.96
PTPN11-205ENST00000635625 PLEKHB2Q96CS7 222 aa9.03□□□□□ -0.96
PTPN11-205ENST00000635625 FAM110AQ9BQ89 295 aa9.03□□□□□ -0.96
PTPN11-205ENST00000635625 VCX2Q9H322 139 aa9.03□□□□□ -0.96
PTPN11-205ENST00000635625 IGLV4-3A0A075B6K6 122 aa9.02□□□□□ -0.97
PTPN11-205ENST00000635625 IGLL5B9A064 214 aa9.02□□□□□ -0.97
PTPN11-205ENST00000635625 LGALS3P17931 250 aaKnown RBP9.02□□□□□ -0.97
PTPN11-205ENST00000635625 ZNF479Q96JC4 524 aa9.02□□□□□ -0.97
PTPN11-205ENST00000635625 TMEM223A0PJW6 202 aa9.01□□□□□ -0.97
PTPN11-205ENST00000635625 K7ERJ3 54 aa9.01□□□□□ -0.97
PTPN11-205ENST00000635625 RBX1P62877 108 aa9.01□□□□□ -0.97
PTPN11-205ENST00000635625 RRN3P1Q2M238 152 aa9.01□□□□□ -0.97
PTPN11-205ENST00000635625 ODF3L2Q3SX64 289 aa9.01□□□□□ -0.97
PTPN11-205ENST00000635625 ZNRF2Q8NHG8 242 aa9.01□□□□□ -0.97
PTPN11-205ENST00000635625 AMELXQ99217 191 aa9.01□□□□□ -0.97
PTPN11-205ENST00000635625 NSD1Q96L73 2696 aaPredicted RBP9.01□□□□□ -0.97
PTPN11-205ENST00000635625 A0A0J9YY99 117 aa9.01□□□□□ -0.97
PTPN11-205ENST00000635625 J3QQQ9 107 aa9.01□□□□□ -0.97
PTPN11-205ENST00000635625 SRSF9Q13242 221 aaKnown RBP eCLIP9.01□□□□□ -0.97
PTPN11-205ENST00000635625 LYRM7Q5U5X0 104 aa9.01□□□□□ -0.97
PTPN11-205ENST00000635625 IL17DQ8TAD2 202 aa9.01□□□□□ -0.97
PTPN11-205ENST00000635625 C2CD3Q4AC94 2353 aa9□□□□□ -0.97
PTPN11-205ENST00000635625 CD28P10747 220 aa9□□□□□ -0.97
PTPN11-205ENST00000635625 HTN1P15515 57 aa9□□□□□ -0.97
PTPN11-205ENST00000635625 SLC25A29Q8N8R3 303 aa9□□□□□ -0.97
PTPN11-205ENST00000635625 ESM1Q9NQ30 184 aa9□□□□□ -0.97
PTPN11-205ENST00000635625 UBE2D1P51668 147 aa8.99□□□□□ -0.97
PTPN11-205ENST00000635625 MRPS36P82909 103 aaKnown RBP8.99□□□□□ -0.97
PTPN11-205ENST00000635625 KRTAP1-1Q07627 177 aa8.99□□□□□ -0.97
PTPN11-205ENST00000635625 MXRA5Q9NR99 2828 aa8.99□□□□□ -0.97
PTPN11-205ENST00000635625 NDUFA7O95182 113 aa8.99□□□□□ -0.97
PTPN11-205ENST00000635625 ZNF22P17026 224 aaPredicted RBP8.99□□□□□ -0.97
PTPN11-205ENST00000635625 SMAGPQ0VAQ4 97 aa8.99□□□□□ -0.97
PTPN11-205ENST00000635625 ZNF418Q8TF45 676 aaPredicted RBP8.99□□□□□ -0.97
PTPN11-205ENST00000635625 NAA38Q9BRA0 125 aaKnown RBP8.99□□□□□ -0.97
PTPN11-205ENST00000635625 TIMM21Q9BVV7 248 aa8.99□□□□□ -0.97
PTPN11-205ENST00000635625 ANK3Q12955 4377 aaKnown RBP8.98□□□□□ -0.97
PTPN11-205ENST00000635625 TRBV10-1A0A0K0K1A3 114 aa8.98□□□□□ -0.97
PTPN11-205ENST00000635625 F8W1H4 67 aa8.98□□□□□ -0.97
PTPN11-205ENST00000635625 CIDEAO60543 219 aa8.98□□□□□ -0.97
PTPN11-205ENST00000635625 COTL1Q14019 142 aa8.98□□□□□ -0.97
PTPN11-205ENST00000635625 YAE1D1Q9NRH1 226 aa8.98□□□□□ -0.97
PTPN11-205ENST00000635625 NACAE9PAV3 2078 aa8.98□□□□□ -0.97
PTPN11-205ENST00000635625 TINCRA0A1B0GVN0 87 aa8.97□□□□□ -0.97
PTPN11-205ENST00000635625 EMP1P54849 157 aa8.97□□□□□ -0.97
PTPN11-205ENST00000635625 LINC01006Q8NI28 216 aa8.97□□□□□ -0.97
PTPN11-205ENST00000635625 TMEM263Q8WUH6 116 aaKnown RBP8.97□□□□□ -0.97
PTPN11-205ENST00000635625 IGHV3-73A0A0B4J1V6 119 aa8.96□□□□□ -0.97
PTPN11-205ENST00000635625 TMEM238C9JI98 176 aa8.96□□□□□ -0.97
PTPN11-205ENST00000635625 CITED2Q99967 270 aaPredicted RBP8.96□□□□□ -0.97
PTPN11-205ENST00000635625 CHCHD7Q9BUK0 85 aa8.96□□□□□ -0.97
PTPN11-205ENST00000635625 MRPL16Q9NX20 251 aaKnown RBP8.96□□□□□ -0.97
PTPN11-205ENST00000635625 SONP18583 2426 aaKnown RBP8.96□□□□□ -0.97
PTPN11-205ENST00000635625 IGHV3-30P01768 117 aa8.96□□□□□ -0.98
PTPN11-205ENST00000635625 IGHV3-30-5P0DP03 117 aa8.96□□□□□ -0.98
PTPN11-205ENST00000635625 TSPEAR-AS2P59090 65 aa8.96□□□□□ -0.98
PTPN11-205ENST00000635625 C1QTNF4Q9BXJ3 329 aa8.96□□□□□ -0.98
PTPN11-205ENST00000635625 XCL2Q9UBD3 114 aa8.96□□□□□ -0.98
PTPN11-205ENST00000635625 UBE2D4Q9Y2X8 147 aa8.96□□□□□ -0.98
PTPN11-205ENST00000635625 TRAV4A0A0B4J268 109 aa8.95□□□□□ -0.98
PTPN11-205ENST00000635625 A0A1W2PRX2 142 aa8.95□□□□□ -0.98
PTPN11-205ENST00000635625 HILS1P60008 231 aa8.95□□□□□ -0.98
PTPN11-205ENST00000635625 C1orf158Q8N1D5 194 aa8.95□□□□□ -0.98
PTPN11-205ENST00000635625 SORL1Q92673 2214 aa8.94□□□□□ -0.98
PTPN11-205ENST00000635625 A0A0J9YXV3 536 aa8.94□□□□□ -0.98
PTPN11-205ENST00000635625 AZU1P20160 251 aa8.94□□□□□ -0.98
PTPN11-205ENST00000635625 PROK1P58294 105 aa8.94□□□□□ -0.98
PTPN11-205ENST00000635625 DAZ2Q13117 558 aaKnown RBP8.94□□□□□ -0.98
PTPN11-205ENST00000635625 OPRPNQ99935 248 aaPredicted RBP8.94□□□□□ -0.98
PTPN11-205ENST00000635625 JMJD1CQ15652 2540 aa8.94□□□□□ -0.98
PTPN11-205ENST00000635625 IGLV1-51P01701 117 aa8.94□□□□□ -0.98
PTPN11-205ENST00000635625 RPL24P83731 157 aaKnown RBP8.94□□□□□ -0.98
PTPN11-205ENST00000635625 Q6ZSN1 163 aa8.94□□□□□ -0.98
PTPN11-205ENST00000635625 DAZ4Q86SG3 579 aaKnown RBP8.94□□□□□ -0.98
PTPN11-205ENST00000635625 DEFB104AQ8WTQ1 72 aa8.94□□□□□ -0.98
PTPN11-205ENST00000635625 C16orf74Q96GX8 76 aa8.94□□□□□ -0.98
PTPN11-205ENST00000635625 SMR3AQ99954 134 aa8.94□□□□□ -0.98
PTPN11-205ENST00000635625 DAZ3Q9NR90 486 aaKnown RBP8.94□□□□□ -0.98
PTPN11-205ENST00000635625 IGHV1-58A0A0C4DH39 117 aa8.93□□□□□ -0.98
PTPN11-205ENST00000635625 RPL36AP83881 106 aaKnown RBP8.93□□□□□ -0.98
PTPN11-205ENST00000635625 NDUFA11Q86Y39 141 aa8.93□□□□□ -0.98
PTPN11-205ENST00000635625 RPL36ALQ969Q0 106 aaKnown RBP8.93□□□□□ -0.98
PTPN11-205ENST00000635625 FAM104AQ969W3 186 aa8.93□□□□□ -0.98
PTPN11-205ENST00000635625 VPS25Q9BRG1 176 aa8.93□□□□□ -0.98
PTPN11-205ENST00000635625 FN1P02751 2386 aaKnown RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms