RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 C1orf64Q8NEQ6 169 aa3.26□□□□□ -1.89
SDCBP-213ENST00000630925 VOPP1Q96AW1 172 aa3.26□□□□□ -1.89
SDCBP-213ENST00000630925 LINC01600Q96MT4 127 aa3.26□□□□□ -1.89
SDCBP-213ENST00000630925 ODF3Q96PU9 254 aa3.26□□□□□ -1.89
SDCBP-213ENST00000630925 TRGV9Q99603 122 aa3.26□□□□□ -1.89
SDCBP-213ENST00000630925 CST11Q9H112 138 aa3.26□□□□□ -1.89
SDCBP-213ENST00000630925 LINC00574Q9H8X3 128 aa3.26□□□□□ -1.89
SDCBP-213ENST00000630925 ATRQ13535 2644 aa3.26□□□□□ -1.89
SDCBP-213ENST00000630925 TNRC6BQ9UPQ9 1833 aaKnown RBP3.25□□□□□ -1.89
SDCBP-213ENST00000630925 IGHV3-15A0A0B4J1V0 119 aa3.25□□□□□ -1.89
SDCBP-213ENST00000630925 LYRM1O43325 122 aa3.25□□□□□ -1.89
SDCBP-213ENST00000630925 ROMO1P60602 79 aa3.25□□□□□ -1.89
SDCBP-213ENST00000630925 FAM19A2Q8N3H0 131 aa3.25□□□□□ -1.89
SDCBP-213ENST00000630925 SMDT1Q9H4I9 107 aa3.25□□□□□ -1.89
SDCBP-213ENST00000630925 MRPL35Q9NZE8 188 aaKnown RBP3.25□□□□□ -1.89
SDCBP-213ENST00000630925 HIGD1BQ9P298 99 aa3.25□□□□□ -1.89
SDCBP-213ENST00000630925 SPTBN1Q01082 2364 aaKnown RBP3.25□□□□□ -1.89
SDCBP-213ENST00000630925 THADAQ6YHU6 1953 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 IGKV2D-26A0A0A0MRZ7 120 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 NAP1L6A6NFF2 107 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 GIG44P09565 113 aaPredicted RBP3.24□□□□□ -1.89
SDCBP-213ENST00000630925 PIPP12273 146 aaPredicted RBP3.24□□□□□ -1.89
SDCBP-213ENST00000630925 ZNF816Q0VGE8 651 aaPredicted RBP3.24□□□□□ -1.89
SDCBP-213ENST00000630925 FAM229BQ4G0N7 80 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 S100A7L2Q5SY68 101 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 CFAP126Q5VTH2 177 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 Q96M85 177 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 NACAE9PAV3 2078 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 APCP25054 2843 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 IGHV3-73A0A0B4J1V6 119 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 FSHBP01225 129 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 MSMBP08118 114 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 RNASE2P10153 161 aaKnown RBP3.24□□□□□ -1.89
SDCBP-213ENST00000630925 MPV17P39210 176 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 XCL1P47992 114 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 KRTDAPP60985 99 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 MPV17LQ2QL34 196 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 LINC00269Q8N2A0 174 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 MUC7Q8TAX7 377 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 DEFB126Q9BYW3 111 aa3.24□□□□□ -1.89
SDCBP-213ENST00000630925 NXT2Q9NPJ8 142 aaKnown RBP3.24□□□□□ -1.89
SDCBP-213ENST00000630925 EXPH5Q8NEV8 1989 aa3.23□□□□□ -1.89
SDCBP-213ENST00000630925 FN1P02751 2386 aaKnown RBP3.23□□□□□ -1.89
SDCBP-213ENST00000630925 MED13LQ71F56 2210 aa3.23□□□□□ -1.89
SDCBP-213ENST00000630925 TRAV2A0A0B4J234 112 aa3.23□□□□□ -1.89
SDCBP-213ENST00000630925 A8MUU9 505 aa3.23□□□□□ -1.89
SDCBP-213ENST00000630925 CPSF4O95639 269 aaKnown RBP3.23□□□□□ -1.89
SDCBP-213ENST00000630925 CLPSP04118 112 aa3.23□□□□□ -1.89
SDCBP-213ENST00000630925 CXCL8P10145 99 aa3.23□□□□□ -1.89
SDCBP-213ENST00000630925 LYPD5Q6UWN5 251 aa3.23□□□□□ -1.89
SDCBP-213ENST00000630925 LINC00467Q9BRT7 94 aa3.23□□□□□ -1.89
SDCBP-213ENST00000630925 NDUFA12Q9UI09 145 aa3.23□□□□□ -1.89
SDCBP-213ENST00000630925 ADAMTS9Q9P2N4 1935 aa3.23□□□□□ -1.89
SDCBP-213ENST00000630925 IGKV1OR2-108A0A075B7D4 117 aa3.23□□□□□ -1.89
SDCBP-213ENST00000630925 A0A1W2PPR1 153 aa3.23□□□□□ -1.89
SDCBP-213ENST00000630925 KANTRA0A1W2PQU2 76 aa3.23□□□□□ -1.89
SDCBP-213ENST00000630925 IGHV4-34P06331 123 aa3.23□□□□□ -1.89
SDCBP-213ENST00000630925 CD24P25063 80 aa3.23□□□□□ -1.89
SDCBP-213ENST00000630925 MIR7-3HGQ8N6C7 128 aa3.23□□□□□ -1.89
SDCBP-213ENST00000630925 ZNF222Q9UK12 451 aa3.23□□□□□ -1.89
SDCBP-213ENST00000630925 F5P12259 2224 aa3.23□□□□□ -1.89
SDCBP-213ENST00000630925 KIAA1549Q9HCM3 1950 aa3.22□□□□□ -1.89
SDCBP-213ENST00000630925 MYO16Q9Y6X6 1858 aa3.22□□□□□ -1.89
SDCBP-213ENST00000630925 IGKV1D-37A0A075B6S9 117 aa3.22□□□□□ -1.89
SDCBP-213ENST00000630925 LOC107984156A0A0G2JMH3 177 aa3.22□□□□□ -1.89
SDCBP-213ENST00000630925 IGHV3-64DA0A0J9YX35 117 aa3.22□□□□□ -1.89
SDCBP-213ENST00000630925 A0A1B0GUV1 79 aa3.22□□□□□ -1.89
SDCBP-213ENST00000630925 hDV103S1A0JD37 113 aa3.22□□□□□ -1.89
SDCBP-213ENST00000630925 C17orf98A8MV24 154 aa3.22□□□□□ -1.89
SDCBP-213ENST00000630925 IGLV1-44P01699 117 aa3.22□□□□□ -1.89
SDCBP-213ENST00000630925 ASAH2BP0C7U1 165 aa3.22□□□□□ -1.89
SDCBP-213ENST00000630925 C1orf134Q5TEV5 83 aa3.22□□□□□ -1.89
SDCBP-213ENST00000630925 LYZL1Q6UWQ5 148 aa3.22□□□□□ -1.89
SDCBP-213ENST00000630925 LYZL2Q7Z4W2 148 aa3.22□□□□□ -1.89
SDCBP-213ENST00000630925 ARL17AQ8IVW1 177 aa3.22□□□□□ -1.89
SDCBP-213ENST00000630925 MED12LQ86YW9 2145 aa3.22□□□□□ -1.89
SDCBP-213ENST00000630925 NUMA1Q14980 2115 aa3.21□□□□□ -1.89
SDCBP-213ENST00000630925 C16orf90A8MZG2 172 aa3.21□□□□□ -1.89
SDCBP-213ENST00000630925 C11orf94C9JXX5 98 aa3.21□□□□□ -1.89
SDCBP-213ENST00000630925 C17orf112F2Z3M2 114 aa3.21□□□□□ -1.89
SDCBP-213ENST00000630925 HCRTO43612 131 aa3.21□□□□□ -1.89
SDCBP-213ENST00000630925 DEFA4P12838 97 aa3.21□□□□□ -1.89
SDCBP-213ENST00000630925 EFNA4P52798 201 aa3.21□□□□□ -1.89
SDCBP-213ENST00000630925 SPANXN1Q5VSR9 72 aa3.21□□□□□ -1.89
SDCBP-213ENST00000630925 XAF1Q6GPH4 301 aa3.21□□□□□ -1.89
SDCBP-213ENST00000630925 C14orf178Q8N769 122 aaPredicted RBP3.21□□□□□ -1.89
SDCBP-213ENST00000630925 C9orf106Q8NAJ2 232 aa3.21□□□□□ -1.89
SDCBP-213ENST00000630925 LINC01560Q8TB33 94 aa3.21□□□□□ -1.89
SDCBP-213ENST00000630925 DYNLRB2Q8TF09 96 aa3.21□□□□□ -1.89
SDCBP-213ENST00000630925 RPL36ALQ969Q0 106 aaKnown RBP3.21□□□□□ -1.89
SDCBP-213ENST00000630925 TMEM141Q96I45 108 aa3.21□□□□□ -1.89
SDCBP-213ENST00000630925 KRTAP9-3Q9BYQ3 159 aa3.21□□□□□ -1.89
SDCBP-213ENST00000630925 ICOSQ9Y6W8 199 aa3.21□□□□□ -1.89
SDCBP-213ENST00000630925 PLXNA2O75051 1894 aa3.21□□□□□ -1.9
SDCBP-213ENST00000630925 NYNRINQ9P2P1 1898 aaKnown RBP3.21□□□□□ -1.9
SDCBP-213ENST00000630925 UMAD1C9J7I0 102 aa3.21□□□□□ -1.9
SDCBP-213ENST00000630925 ZNF22P17026 224 aaPredicted RBP3.21□□□□□ -1.9
SDCBP-213ENST00000630925 ESRGQ1W209 222 aa3.21□□□□□ -1.9
SDCBP-213ENST00000630925 C16orf74Q96GX8 76 aa3.21□□□□□ -1.9
SDCBP-213ENST00000630925 LITAFQ99732 161 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms