RNA–Protein interactions for RNA: ENST00000623253.4

CD99-211, Transcript of CD99 molecule (Xg blood group), humanhuman

TSL 1 (best)

Gene CD99, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD99-211ENST00000623253 DPH3P1Q9H4G8 78 aa10.33□□□□□ -0.76
CD99-211ENST00000623253 M0QY20 66 aa10.32□□□□□ -0.76
CD99-211ENST00000623253 TAGLN2P37802 199 aaKnown RBP10.32□□□□□ -0.76
CD99-211ENST00000623253 REG3AQ06141 175 aa10.32□□□□□ -0.76
CD99-211ENST00000623253 AP5S1Q9NUS5 200 aa10.32□□□□□ -0.76
CD99-211ENST00000623253 TRBV20OR9-2A0A075B6H5 130 aa10.31□□□□□ -0.76
CD99-211ENST00000623253 IGHV3-64A0A075B6Q5 118 aa10.31□□□□□ -0.76
CD99-211ENST00000623253 TRGC1P0CF51 173 aa10.31□□□□□ -0.76
CD99-211ENST00000623253 CHTF8P0CG12 524 aa10.31□□□□□ -0.76
CD99-211ENST00000623253 CNBPP62633 177 aaKnown RBP10.31□□□□□ -0.76
CD99-211ENST00000623253 IQCJQ1A5X6 159 aa10.31□□□□□ -0.76
CD99-211ENST00000623253 SUMO4Q6EEV6 95 aa10.31□□□□□ -0.76
CD99-211ENST00000623253 A0A087WYN8 130 aa10.3□□□□□ -0.76
CD99-211ENST00000623253 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.3□□□□□ -0.76
CD99-211ENST00000623253 IGHV1-24A0A0C4DH33 117 aa10.3□□□□□ -0.76
CD99-211ENST00000623253 CIRBPQ14011 172 aaKnown RBP10.29□□□□□ -0.76
CD99-211ENST00000623253 RASL11AQ6T310 242 aa10.29□□□□□ -0.76
CD99-211ENST00000623253 LYZL1Q6UWQ5 148 aa10.29□□□□□ -0.76
CD99-211ENST00000623253 NKX2-5P52952 324 aaPredicted RBP10.28□□□□□ -0.76
CD99-211ENST00000623253 WDR73Q6P4I2 378 aa10.28□□□□□ -0.76
CD99-211ENST00000623253 C9orf62Q8N4C0 152 aa10.28□□□□□ -0.76
CD99-211ENST00000623253 TRAV8-4A0A0B4J246 113 aa10.27□□□□□ -0.77
CD99-211ENST00000623253 NTF3P20783 257 aa10.27□□□□□ -0.77
CD99-211ENST00000623253 CTRLP40313 264 aa10.27□□□□□ -0.77
CD99-211ENST00000623253 C20orf203Q8NBC4 194 aa10.27□□□□□ -0.77
CD99-211ENST00000623253 NUDT10Q8NFP7 164 aa10.27□□□□□ -0.77
CD99-211ENST00000623253 NUDT11Q96G61 164 aa10.27□□□□□ -0.77
CD99-211ENST00000623253 RNF185Q96GF1 192 aa10.27□□□□□ -0.77
CD99-211ENST00000623253 PHOX2AO14813 284 aa10.26□□□□□ -0.77
CD99-211ENST00000623253 SLPIP03973 132 aa10.26□□□□□ -0.77
CD99-211ENST00000623253 SPACA4Q8TDM5 124 aa10.26□□□□□ -0.77
CD99-211ENST00000623253 C7orf33Q8WU49 177 aa10.26□□□□□ -0.77
CD99-211ENST00000623253 TMEM243Q9BU79 118 aa10.26□□□□□ -0.77
CD99-211ENST00000623253 CNFNQ9BYD5 112 aa10.26□□□□□ -0.77
CD99-211ENST00000623253 RPP21Q9H633 154 aaKnown RBP10.26□□□□□ -0.77
CD99-211ENST00000623253 NIT2Q9NQR4 276 aa10.26□□□□□ -0.77
CD99-211ENST00000623253 IGLV4-60A0A075B6I1 120 aa10.25□□□□□ -0.77
CD99-211ENST00000623253 TWIST1Q15672 202 aa10.25□□□□□ -0.77
CD99-211ENST00000623253 Q6ZNX1 250 aa10.25□□□□□ -0.77
CD99-211ENST00000623253 PGLYRP4Q96LB8 373 aa10.25□□□□□ -0.77
CD99-211ENST00000623253 RNF213Q63HN8 5207 aa10.25□□□□□ -0.77
CD99-211ENST00000623253 A0A1B0GUV1 79 aa10.24□□□□□ -0.77
CD99-211ENST00000623253 AKAP14Q86UN6 197 aa10.24□□□□□ -0.77
CD99-211ENST00000623253 OCC1Q8TAD7 63 aa10.24□□□□□ -0.77
CD99-211ENST00000623253 GTSF1Q8WW33 167 aa10.24□□□□□ -0.77
CD99-211ENST00000623253 GFRA4Q9GZZ7 299 aa10.24□□□□□ -0.77
CD99-211ENST00000623253 RNASE7Q9H1E1 156 aaKnown RBP10.24□□□□□ -0.77
CD99-211ENST00000623253 K7EN84 100 aa10.23□□□□□ -0.77
CD99-211ENST00000623253 UBE2L6O14933 153 aa10.23□□□□□ -0.77
CD99-211ENST00000623253 COX6A2Q02221 97 aa10.23□□□□□ -0.77
CD99-211ENST00000623253 PLAC8Q9NZF1 115 aa10.23□□□□□ -0.77
CD99-211ENST00000623253 BLOC1S1P78537 153 aa10.22□□□□□ -0.77
CD99-211ENST00000623253 COTL1Q14019 142 aa10.22□□□□□ -0.77
CD99-211ENST00000623253 MAJINQ3KP22 176 aa10.22□□□□□ -0.77
CD99-211ENST00000623253 LRP2P98164 4655 aa10.21□□□□□ -0.77
CD99-211ENST00000623253 IGKV2-24A0A0C4DH68 120 aa10.21□□□□□ -0.77
CD99-211ENST00000623253 IGKV3OR2-268A0A0C4DH90 116 aa10.21□□□□□ -0.77
CD99-211ENST00000623253 GAGE12HA6NDE8 117 aa10.21□□□□□ -0.77
CD99-211ENST00000623253 TMEM250H0YL14 139 aa10.21□□□□□ -0.77
CD99-211ENST00000623253 AMTP48728 403 aa10.21□□□□□ -0.77
CD99-211ENST00000623253 ODF1Q14990 250 aa10.21□□□□□ -0.77
CD99-211ENST00000623253 LYPD6BQ8NI32 183 aa10.21□□□□□ -0.77
CD99-211ENST00000623253 HIGD2BQ4VC39 106 aa10.2□□□□□ -0.78
CD99-211ENST00000623253 CFAP161Q6P656 301 aa10.2□□□□□ -0.78
CD99-211ENST00000623253 ALKAL2Q6UX46 152 aa10.2□□□□□ -0.78
CD99-211ENST00000623253 SMIM15Q7Z3B0 74 aa10.2□□□□□ -0.78
CD99-211ENST00000623253 GATD1Q8NB37 220 aa10.2□□□□□ -0.78
CD99-211ENST00000623253 LINC01600Q96MT4 127 aa10.2□□□□□ -0.78
CD99-211ENST00000623253 GATCO43716 136 aaKnown RBP10.19□□□□□ -0.78
CD99-211ENST00000623253 RPS10P46783 165 aaKnown RBP10.19□□□□□ -0.78
CD99-211ENST00000623253 C15orf56Q8N910 161 aa10.19□□□□□ -0.78
CD99-211ENST00000623253 TRAV26-2A0A0B4J265 109 aa10.18□□□□□ -0.78
CD99-211ENST00000623253 A8MWL6 223 aa10.18□□□□□ -0.78
CD99-211ENST00000623253 NDUFS6O75380 124 aaKnown RBP10.18□□□□□ -0.78
CD99-211ENST00000623253 FAM231DQ6ZW35 169 aa10.18□□□□□ -0.78
CD99-211ENST00000623253 STPG4Q8N801 248 aa10.18□□□□□ -0.78
CD99-211ENST00000623253 PRSS3P2Q8NHM4 247 aa10.18□□□□□ -0.78
CD99-211ENST00000623253 hCG_2014768A0A024R1R8 64 aa10.17□□□□□ -0.78
CD99-211ENST00000623253 NCR2O95944 276 aa10.17□□□□□ -0.78
CD99-211ENST00000623253 PRR3P79522 188 aaKnown RBP10.17□□□□□ -0.78
CD99-211ENST00000623253 TEX261Q6UWH6 196 aa10.17□□□□□ -0.78
CD99-211ENST00000623253 CEBPGP53567 150 aa10.16□□□□□ -0.78
CD99-211ENST00000623253 CT83Q5H943 113 aa10.16□□□□□ -0.78
CD99-211ENST00000623253 RPL39LQ96EH5 51 aaKnown RBP10.16□□□□□ -0.78
CD99-211ENST00000623253 FOXA3P55318 350 aaPredicted RBP10.15□□□□□ -0.78
CD99-211ENST00000623253 BORCS7Q96B45 105 aa10.15□□□□□ -0.78
CD99-211ENST00000623253 H7C423 109 aa10.14□□□□□ -0.79
CD99-211ENST00000623253 APCSP02743 223 aa10.14□□□□□ -0.79
CD99-211ENST00000623253 AMMECR1LQ6DCA0 310 aa10.14□□□□□ -0.79
CD99-211ENST00000623253 CHCHD10Q8WYQ3 142 aaPredicted RBP10.14□□□□□ -0.79
CD99-211ENST00000623253 TNXBP22105 4242 aa10.14□□□□□ -0.79
CD99-211ENST00000623253 A0A0J9YXV3 536 aa10.13□□□□□ -0.79
CD99-211ENST00000623253 SDHAF1A6NFY7 115 aa10.13□□□□□ -0.79
CD99-211ENST00000623253 RNASEKQ6P5S7 137 aaKnown RBP10.13□□□□□ -0.79
CD99-211ENST00000623253 SMIM7Q9BQ49 75 aa10.13□□□□□ -0.79
CD99-211ENST00000623253 EIF5A2Q9GZV4 153 aaKnown RBP10.13□□□□□ -0.79
CD99-211ENST00000623253 A0A096LNI7 61 aa10.12□□□□□ -0.79
CD99-211ENST00000623253 REG3GQ6UW15 175 aa10.12□□□□□ -0.79
CD99-211ENST00000623253 LINC01551Q86U37 167 aa10.12□□□□□ -0.79
CD99-211ENST00000623253 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms