RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 C6orf226Q5I0X4 101 aa9.63□□□□□ -0.87
MSH6-215ENST00000622629 C20orf203Q8NBC4 194 aa9.63□□□□□ -0.87
MSH6-215ENST00000622629 SLC25A20O43772 301 aa9.62□□□□□ -0.87
MSH6-215ENST00000622629 GAGE2BQ13066 116 aa9.62□□□□□ -0.87
MSH6-215ENST00000622629 GAGE2EQ4V326 116 aa9.62□□□□□ -0.87
MSH6-215ENST00000622629 MUSTN1Q8IVN3 82 aa9.62□□□□□ -0.87
MSH6-215ENST00000622629 GAGE2DQ9UEU5 116 aa9.62□□□□□ -0.87
MSH6-215ENST00000622629 LEPROTO15243 131 aa9.62□□□□□ -0.87
MSH6-215ENST00000622629 DMXL2Q8TDJ6 3036 aa9.61□□□□□ -0.87
MSH6-215ENST00000622629 MALP21145 153 aa9.61□□□□□ -0.87
MSH6-215ENST00000622629 PKIGQ9Y2B9 76 aa9.61□□□□□ -0.87
MSH6-215ENST00000622629 CRPP02741 224 aa9.61□□□□□ -0.87
MSH6-215ENST00000622629 TMEM243Q9BU79 118 aa9.61□□□□□ -0.87
MSH6-215ENST00000622629 V9GYY9 64 aa9.61□□□□□ -0.87
MSH6-215ENST00000622629 PFN2P35080 140 aa9.6□□□□□ -0.87
MSH6-215ENST00000622629 DAND5Q8N907 189 aa9.6□□□□□ -0.87
MSH6-215ENST00000622629 PRM2P04554 102 aa9.6□□□□□ -0.87
MSH6-215ENST00000622629 TM2D2Q9BX73 214 aa9.6□□□□□ -0.87
MSH6-215ENST00000622629 HHLA3Q9XRX5 114 aa9.6□□□□□ -0.87
MSH6-215ENST00000622629 NTN5Q8WTR8 489 aaPredicted RBP9.6□□□□□ -0.87
MSH6-215ENST00000622629 PTH2Q96A98 100 aa9.6□□□□□ -0.87
MSH6-215ENST00000622629 Q9H8V8 135 aa9.6□□□□□ -0.87
MSH6-215ENST00000622629 A0A096LPF7 62 aa9.59□□□□□ -0.87
MSH6-215ENST00000622629 ZFAND6Q6FIF0 208 aa9.59□□□□□ -0.87
MSH6-215ENST00000622629 RBMY1BA6NDE4 496 aaKnown RBP9.59□□□□□ -0.87
MSH6-215ENST00000622629 RBMY1EA6NEQ0 496 aaKnown RBP9.59□□□□□ -0.87
MSH6-215ENST00000622629 RBMY1DP0C7P1 496 aaKnown RBP9.59□□□□□ -0.87
MSH6-215ENST00000622629 RBMY1A1P0DJD3 496 aaKnown RBP9.59□□□□□ -0.87
MSH6-215ENST00000622629 RBMY1CP0DJD4 496 aa9.59□□□□□ -0.87
MSH6-215ENST00000622629 PSMB8P28062 276 aa9.59□□□□□ -0.87
MSH6-215ENST00000622629 TMEM89A2RUT3 159 aa9.58□□□□□ -0.88
MSH6-215ENST00000622629 SPANXA1Q9NS26 97 aa9.58□□□□□ -0.88
MSH6-215ENST00000622629 PROK1P58294 105 aa9.58□□□□□ -0.88
MSH6-215ENST00000622629 PIFOQ8TCI5 191 aa9.58□□□□□ -0.88
MSH6-215ENST00000622629 COX8CQ7Z4L0 72 aa9.58□□□□□ -0.88
MSH6-215ENST00000622629 M0QXV9 152 aa9.58□□□□□ -0.88
MSH6-215ENST00000622629 TMEM86BQ8N661 226 aa9.58□□□□□ -0.88
MSH6-215ENST00000622629 IGHV4-4A0A075B6R2 117 aa9.57□□□□□ -0.88
MSH6-215ENST00000622629 HERVK_113P63121 156 aa9.57□□□□□ -0.88
MSH6-215ENST00000622629 G3V4G9 280 aa9.57□□□□□ -0.88
MSH6-215ENST00000622629 H3BMM0 161 aa9.57□□□□□ -0.88
MSH6-215ENST00000622629 M0QY20 66 aa9.57□□□□□ -0.88
MSH6-215ENST00000622629 IGLV1-40P01703 118 aa9.57□□□□□ -0.88
MSH6-215ENST00000622629 SCGB1A1P11684 91 aa9.57□□□□□ -0.88
MSH6-215ENST00000622629 DCANP1Q8TF63 244 aa9.57□□□□□ -0.88
MSH6-215ENST00000622629 ADGRG4Q8IZF6 3080 aa9.56□□□□□ -0.88
MSH6-215ENST00000622629 KLLNB2CW77 178 aa9.56□□□□□ -0.88
MSH6-215ENST00000622629 IGHV3-30-3P0DP02 117 aa9.56□□□□□ -0.88
MSH6-215ENST00000622629 UBE2WQ96B02 151 aa9.56□□□□□ -0.88
MSH6-215ENST00000622629 PLA2G2AP14555 144 aa9.56□□□□□ -0.88
MSH6-215ENST00000622629 MAP6D1Q9H9H5 199 aa9.56□□□□□ -0.88
MSH6-215ENST00000622629 USP24Q9UPU5 2620 aa9.55□□□□□ -0.88
MSH6-215ENST00000622629 CLPSL2Q6UWE3 100 aa9.55□□□□□ -0.88
MSH6-215ENST00000622629 C18orf65Q6ZTR6 163 aa9.55□□□□□ -0.88
MSH6-215ENST00000622629 NDUFA11Q86Y39 141 aa9.55□□□□□ -0.88
MSH6-215ENST00000622629 IGHV4-31P0DP07 118 aa9.55□□□□□ -0.88
MSH6-215ENST00000622629 KRTAP10-9P60411 292 aa9.55□□□□□ -0.88
MSH6-215ENST00000622629 Q6YL49 198 aa9.55□□□□□ -0.88
MSH6-215ENST00000622629 A0A0J9YY99 117 aa9.54□□□□□ -0.88
MSH6-215ENST00000622629 Q6ZUT4 128 aa9.54□□□□□ -0.88
MSH6-215ENST00000622629 CARD19Q96LW7 228 aa9.54□□□□□ -0.88
MSH6-215ENST00000622629 POLR2KP53803 58 aaKnown RBP9.54□□□□□ -0.88
MSH6-215ENST00000622629 LGALS9O00182 355 aa9.54□□□□□ -0.88
MSH6-215ENST00000622629 NXPH4O95158 308 aa9.54□□□□□ -0.88
MSH6-215ENST00000622629 TRBV7-3A0A075B6L6 115 aa9.53□□□□□ -0.88
MSH6-215ENST00000622629 TRBV27A0A0K0K1C4 114 aa9.53□□□□□ -0.88
MSH6-215ENST00000622629 C5orf38Q86SI9 138 aa9.53□□□□□ -0.88
MSH6-215ENST00000622629 ODF3Q96PU9 254 aa9.53□□□□□ -0.88
MSH6-215ENST00000622629 PSMG3-AS1Q96PY0 264 aa9.53□□□□□ -0.88
MSH6-215ENST00000622629 IGLV4-3A0A075B6K6 122 aa9.52□□□□□ -0.88
MSH6-215ENST00000622629 SS18Q15532 418 aa9.52□□□□□ -0.88
MSH6-215ENST00000622629 CRYGDP07320 174 aa9.52□□□□□ -0.89
MSH6-215ENST00000622629 ZNF22P17026 224 aaPredicted RBP9.52□□□□□ -0.89
MSH6-215ENST00000622629 TEN1Q86WV5 123 aa9.52□□□□□ -0.89
MSH6-215ENST00000622629 RNF152Q8N8N0 203 aa9.52□□□□□ -0.89
MSH6-215ENST00000622629 DNAJC30Q96LL9 226 aa9.52□□□□□ -0.89
MSH6-215ENST00000622629 WFDC11Q8NEX6 87 aa9.52□□□□□ -0.89
MSH6-215ENST00000622629 C4orf3Q8WVX3 66 aa9.52□□□□□ -0.89
MSH6-215ENST00000622629 F5H768 121 aa9.52□□□□□ -0.89
MSH6-215ENST00000622629 FOXI1Q12951 378 aa9.51□□□□□ -0.89
MSH6-215ENST00000622629 SLC25A29Q8N8R3 303 aa9.51□□□□□ -0.89
MSH6-215ENST00000622629 IGHV1-58A0A0C4DH39 117 aa9.51□□□□□ -0.89
MSH6-215ENST00000622629 SEC61GP60059 68 aa9.51□□□□□ -0.89
MSH6-215ENST00000622629 Q6ZTI0 123 aa9.51□□□□□ -0.89
MSH6-215ENST00000622629 ANKRD29Q8N6D5 301 aa9.51□□□□□ -0.89
MSH6-215ENST00000622629 IGLV2-18A0A075B6J9 118 aa9.51□□□□□ -0.89
MSH6-215ENST00000622629 K7EQD1 137 aa9.51□□□□□ -0.89
MSH6-215ENST00000622629 TCL1BO95988 128 aa9.51□□□□□ -0.89
MSH6-215ENST00000622629 DEFB114Q30KQ6 69 aa9.51□□□□□ -0.89
MSH6-215ENST00000622629 S100A7L2Q5SY68 101 aa9.51□□□□□ -0.89
MSH6-215ENST00000622629 XCL1P47992 114 aa9.5□□□□□ -0.89
MSH6-215ENST00000622629 RETNQ9HD89 108 aa9.5□□□□□ -0.89
MSH6-215ENST00000622629 LINC01620Q4KN68 170 aa9.5□□□□□ -0.89
MSH6-215ENST00000622629 VSIG2Q96IQ7 327 aa9.5□□□□□ -0.89
MSH6-215ENST00000622629 LINC00467Q9BRT7 94 aa9.5□□□□□ -0.89
MSH6-215ENST00000622629 A0A0J9YXY3 114 aa9.5□□□□□ -0.89
MSH6-215ENST00000622629 ZNF702PQ9H963 129 aa9.5□□□□□ -0.89
MSH6-215ENST00000622629 CDKN2A-AS1Q9UH64 79 aa9.5□□□□□ -0.89
MSH6-215ENST00000622629 DNAJC9-AS1A6NH13 148 aa9.5□□□□□ -0.89
MSH6-215ENST00000622629 GAGE2AQ6NT46 116 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms