RNA–Protein interactions for RNA: ENST00000621029.4

SEMA3B-215, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-215ENST00000621029 FOXA3P55318 350 aaPredicted RBP18.97■□□□□ 0.63
SEMA3B-215ENST00000621029 REG3AQ06141 175 aa18.97■□□□□ 0.63
SEMA3B-215ENST00000621029 FAT1Q14517 4588 aa18.95■□□□□ 0.62
SEMA3B-215ENST00000621029 IGLV10-54A0A075B6I4 117 aa18.95■□□□□ 0.62
SEMA3B-215ENST00000621029 CT83Q5H943 113 aa18.95■□□□□ 0.62
SEMA3B-215ENST00000621029 Q6ZSA8 131 aa18.95■□□□□ 0.62
SEMA3B-215ENST00000621029 LINC01551Q86U37 167 aa18.95■□□□□ 0.62
SEMA3B-215ENST00000621029 SRP19P09132 144 aaKnown RBP18.94■□□□□ 0.62
SEMA3B-215ENST00000621029 RPL39LQ96EH5 51 aaKnown RBP18.94■□□□□ 0.62
SEMA3B-215ENST00000621029 TEX261Q6UWH6 196 aa18.93■□□□□ 0.62
SEMA3B-215ENST00000621029 C20orf203Q8NBC4 194 aa18.93■□□□□ 0.62
SEMA3B-215ENST00000621029 IGLV4-60A0A075B6I1 120 aa18.92■□□□□ 0.62
SEMA3B-215ENST00000621029 A0A1B0GUV1 79 aa18.92■□□□□ 0.62
SEMA3B-215ENST00000621029 NDUFS6O75380 124 aaKnown RBP18.92■□□□□ 0.62
SEMA3B-215ENST00000621029 TSKUQ8WUA8 353 aa18.9■□□□□ 0.62
SEMA3B-215ENST00000621029 HIGD1CA8MV81 97 aa18.89■□□□□ 0.61
SEMA3B-215ENST00000621029 OSTCQ9NRP0 149 aa18.89■□□□□ 0.61
SEMA3B-215ENST00000621029 TRAV8-4A0A0B4J246 113 aa18.88■□□□□ 0.61
SEMA3B-215ENST00000621029 A0A1B0GUT8 65 aa18.88■□□□□ 0.61
SEMA3B-215ENST00000621029 GFRA4Q9GZZ7 299 aa18.88■□□□□ 0.61
SEMA3B-215ENST00000621029 PRSS1P07477 247 aa18.87■□□□□ 0.61
SEMA3B-215ENST00000621029 AMMECR1LQ6DCA0 310 aa18.87■□□□□ 0.61
SEMA3B-215ENST00000621029 KRTAP26-1Q6PEX3 210 aa18.87■□□□□ 0.61
SEMA3B-215ENST00000621029 SCXQ7RTU7 201 aa18.87■□□□□ 0.61
SEMA3B-215ENST00000621029 DNAH8Q96JB1 4490 aa18.86■□□□□ 0.61
SEMA3B-215ENST00000621029 SDHAF1A6NFY7 115 aa18.86■□□□□ 0.61
SEMA3B-215ENST00000621029 APCSP02743 223 aa18.86■□□□□ 0.61
SEMA3B-215ENST00000621029 TMEM241Q24JQ0 296 aa18.86■□□□□ 0.61
SEMA3B-215ENST00000621029 LINC00528Q8N1L1 170 aa18.86■□□□□ 0.61
SEMA3B-215ENST00000621029 SRRM2Q9UQ35 2752 aaKnown RBP18.85■□□□□ 0.61
SEMA3B-215ENST00000621029 NCR2O95944 276 aa18.85■□□□□ 0.61
SEMA3B-215ENST00000621029 PMCHP20382 165 aa18.85■□□□□ 0.61
SEMA3B-215ENST00000621029 CHAC1Q9BUX1 264 aa18.85■□□□□ 0.61
SEMA3B-215ENST00000621029 VPS13BQ7Z7G8 4022 aa18.84■□□□□ 0.61
SEMA3B-215ENST00000621029 IGKV3OR2-268A0A0C4DH90 116 aa18.84■□□□□ 0.61
SEMA3B-215ENST00000621029 PLA2G1BP04054 148 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-215ENST00000621029 FAM74A3Q4VXF1 159 aa18.84■□□□□ 0.61
SEMA3B-215ENST00000621029 RNASEKQ6P5S7 137 aaKnown RBP18.84■□□□□ 0.61
SEMA3B-215ENST00000621029 FAM231BA6NCW3 169 aa18.83■□□□□ 0.6
SEMA3B-215ENST00000621029 DGAT2L7PQ6IED9 249 aa18.83■□□□□ 0.6
SEMA3B-215ENST00000621029 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.82■□□□□ 0.6
SEMA3B-215ENST00000621029 IGKV2-29A2NJV5 120 aaPredicted RBP18.82■□□□□ 0.6
SEMA3B-215ENST00000621029 ADIRFQ15847 76 aa18.82■□□□□ 0.6
SEMA3B-215ENST00000621029 TMEM191AQ9H0A3 160 aa18.82■□□□□ 0.6
SEMA3B-215ENST00000621029 I3L3M4 83 aa18.81■□□□□ 0.6
SEMA3B-215ENST00000621029 CLRN3Q8NCR9 226 aa18.81■□□□□ 0.6
SEMA3B-215ENST00000621029 ISOC2Q96AB3 205 aa18.81■□□□□ 0.6
SEMA3B-215ENST00000621029 ST20Q9HBF5 79 aa18.81■□□□□ 0.6
SEMA3B-215ENST00000621029 V9GYV3 84 aa18.81■□□□□ 0.6
SEMA3B-215ENST00000621029 hDV102S1A0JD36 115 aa18.8■□□□□ 0.6
SEMA3B-215ENST00000621029 RIGQ13278 110 aa18.8■□□□□ 0.6
SEMA3B-215ENST00000621029 PEA15Q15121 130 aa18.8■□□□□ 0.6
SEMA3B-215ENST00000621029 GAS8-AS1O95177 125 aa18.79■□□□□ 0.6
SEMA3B-215ENST00000621029 RPL23P62829 140 aaKnown RBP18.79■□□□□ 0.6
SEMA3B-215ENST00000621029 TRBV6-5A0A0K0K1A5 114 aa18.78■□□□□ 0.6
SEMA3B-215ENST00000621029 C9JQL5 133 aa18.78■□□□□ 0.6
SEMA3B-215ENST00000621029 AMN1Q8IY45 258 aa18.78■□□□□ 0.6
SEMA3B-215ENST00000621029 CIRBP-AS1Q8TBR5 109 aa18.78■□□□□ 0.6
SEMA3B-215ENST00000621029 NAT8Q9UHE5 227 aa18.78■□□□□ 0.6
SEMA3B-215ENST00000621029 H7C423 109 aa18.77■□□□□ 0.6
SEMA3B-215ENST00000621029 FGF6P10767 208 aa18.77■□□□□ 0.6
SEMA3B-215ENST00000621029 NUP35Q8NFH5 326 aa18.77■□□□□ 0.6
SEMA3B-215ENST00000621029 GAGE12HA6NDE8 117 aa18.76■□□□□ 0.59
SEMA3B-215ENST00000621029 RAB4AP20338 218 aa18.76■□□□□ 0.59
SEMA3B-215ENST00000621029 SRSF3P84103 164 aaKnown RBP18.76■□□□□ 0.59
SEMA3B-215ENST00000621029 C9orf163Q8N9P6 203 aa18.76■□□□□ 0.59
SEMA3B-215ENST00000621029 MRAP2Q96G30 205 aa18.76■□□□□ 0.59
SEMA3B-215ENST00000621029 RNF185Q96GF1 192 aa18.76■□□□□ 0.59
SEMA3B-215ENST00000621029 AP5S1Q9NUS5 200 aa18.76■□□□□ 0.59
SEMA3B-215ENST00000621029 NAT8BQ9UHF3 227 aa18.76■□□□□ 0.59
SEMA3B-215ENST00000621029 BTF3L4Q96K17 158 aa18.75■□□□□ 0.59
SEMA3B-215ENST00000621029 TMEM242Q9NWH2 141 aa18.75■□□□□ 0.59
SEMA3B-215ENST00000621029 TMEM101Q96IK0 257 aa18.74■□□□□ 0.59
SEMA3B-215ENST00000621029 FLG2Q5D862 2391 aaPredicted RBP18.73■□□□□ 0.59
SEMA3B-215ENST00000621029 RPS10P46783 165 aaKnown RBP18.73■□□□□ 0.59
SEMA3B-215ENST00000621029 SMKR1H3BMG3 65 aa18.72■□□□□ 0.59
SEMA3B-215ENST00000621029 TSHBP01222 138 aa18.72■□□□□ 0.59
SEMA3B-215ENST00000621029 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.7■□□□□ 0.58
SEMA3B-215ENST00000621029 ZNF25P17030 456 aaPredicted RBP18.7■□□□□ 0.58
SEMA3B-215ENST00000621029 CFAP161Q6P656 301 aa18.7■□□□□ 0.58
SEMA3B-215ENST00000621029 CHCHD10Q8WYQ3 142 aaPredicted RBP18.7■□□□□ 0.58
SEMA3B-215ENST00000621029 SMDT1Q9H4I9 107 aa18.7■□□□□ 0.58
SEMA3B-215ENST00000621029 DMBT1Q9UGM3 2413 aaPredicted RBP18.7■□□□□ 0.58
SEMA3B-215ENST00000621029 CNBPP62633 177 aaKnown RBP18.69■□□□□ 0.58
SEMA3B-215ENST00000621029 OR5A1Q8NGJ0 315 aa18.69■□□□□ 0.58
SEMA3B-215ENST00000621029 FCER1GP30273 86 aa18.68■□□□□ 0.58
SEMA3B-215ENST00000621029 CAMPP49913 170 aa18.68■□□□□ 0.58
SEMA3B-215ENST00000621029 POLR2KP53803 58 aaKnown RBP18.68■□□□□ 0.58
SEMA3B-215ENST00000621029 PPP1R17O96001 155 aa18.67■□□□□ 0.58
SEMA3B-215ENST00000621029 ESDP10768 282 aa18.67■□□□□ 0.58
SEMA3B-215ENST00000621029 TRBV27A0A0K0K1C4 114 aa18.66■□□□□ 0.58
SEMA3B-215ENST00000621029 SMIM27A0A1W2PRY6 76 aa18.66■□□□□ 0.58
SEMA3B-215ENST00000621029 VCYO14598 125 aa18.66■□□□□ 0.58
SEMA3B-215ENST00000621029 SDIM1Q6ZPB5 146 aa18.66■□□□□ 0.58
SEMA3B-215ENST00000621029 IGHV3-64A0A075B6Q5 118 aa18.65■□□□□ 0.58
SEMA3B-215ENST00000621029 DPH3Q96FX2 82 aa18.65■□□□□ 0.58
SEMA3B-215ENST00000621029 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP18.65■□□□□ 0.58
SEMA3B-215ENST00000621029 C7orf77A4D0Y5 90 aa18.64■□□□□ 0.57
SEMA3B-215ENST00000621029 HIGD2BQ4VC39 106 aa18.64■□□□□ 0.57
SEMA3B-215ENST00000621029 C15orf56Q8N910 161 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms