RNA–Protein interactions for RNA: ENST00000621016.4

CDH1-214, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-214ENST00000621016 OVOL1O14753 267 aa8.03□□□□□ -1.12
CDH1-214ENST00000621016 UBE2D1P51668 147 aa8.03□□□□□ -1.12
CDH1-214ENST00000621016 Q5XG85 94 aa8.03□□□□□ -1.12
CDH1-214ENST00000621016 PIFOQ8TCI5 191 aa8.03□□□□□ -1.12
CDH1-214ENST00000621016 ZMAT4Q9H898 229 aa8.03□□□□□ -1.12
CDH1-214ENST00000621016 LINC00526Q96FQ7 95 aa8.03□□□□□ -1.12
CDH1-214ENST00000621016 M0R2P5 195 aa8.02□□□□□ -1.13
CDH1-214ENST00000621016 NRACQ8N912 160 aa8.02□□□□□ -1.13
CDH1-214ENST00000621016 V9GYY9 64 aa8.02□□□□□ -1.13
CDH1-214ENST00000621016 AVPP01185 164 aa8.02□□□□□ -1.13
CDH1-214ENST00000621016 MRAPQ8TCY5 172 aa8.02□□□□□ -1.13
CDH1-214ENST00000621016 CLEC2BQ92478 149 aa8.02□□□□□ -1.13
CDH1-214ENST00000621016 SUMO2P61956 95 aaKnown RBP8.01□□□□□ -1.13
CDH1-214ENST00000621016 TRAV8-3A0A0A6YYJ7 113 aa8.01□□□□□ -1.13
CDH1-214ENST00000621016 PSMG4Q5JS54 123 aa8.01□□□□□ -1.13
CDH1-214ENST00000621016 Q6ZSV7 163 aa8.01□□□□□ -1.13
CDH1-214ENST00000621016 GPHB5Q86YW7 130 aa8.01□□□□□ -1.13
CDH1-214ENST00000621016 SPANXA1Q9NS26 97 aa8.01□□□□□ -1.13
CDH1-214ENST00000621016 KLK9Q9UKQ9 250 aa8.01□□□□□ -1.13
CDH1-214ENST00000621016 IGHV3-73A0A0B4J1V6 119 aa8.01□□□□□ -1.13
CDH1-214ENST00000621016 TRAV21A0A0B4J279 112 aa8.01□□□□□ -1.13
CDH1-214ENST00000621016 PRM2P04554 102 aa8.01□□□□□ -1.13
CDH1-214ENST00000621016 PFN2P35080 140 aa8.01□□□□□ -1.13
CDH1-214ENST00000621016 C9orf47Q6ZRZ4 202 aa8.01□□□□□ -1.13
CDH1-214ENST00000621016 SBSPONQ8IVN8 264 aa8.01□□□□□ -1.13
CDH1-214ENST00000621016 ZFAND2AQ8N6M9 145 aa8.01□□□□□ -1.13
CDH1-214ENST00000621016 RPL39P62891 51 aaKnown RBP8□□□□□ -1.13
CDH1-214ENST00000621016 SMIM2Q9BVW6 85 aa8□□□□□ -1.13
CDH1-214ENST00000621016 IGHV4-59P01825 116 aa8□□□□□ -1.13
CDH1-214ENST00000621016 RHOHQ15669 191 aa8□□□□□ -1.13
CDH1-214ENST00000621016 C2orf66Q6UXQ4 117 aa8□□□□□ -1.13
CDH1-214ENST00000621016 C9orf139Q6ZV77 190 aa8□□□□□ -1.13
CDH1-214ENST00000621016 POM121L12Q8N7R1 296 aa8□□□□□ -1.13
CDH1-214ENST00000621016 A0A1B0GX51 115 aa8□□□□□ -1.13
CDH1-214ENST00000621016 PRSS2P07478 247 aa8□□□□□ -1.13
CDH1-214ENST00000621016 KHDC1LQ5JSQ8 128 aa8□□□□□ -1.13
CDH1-214ENST00000621016 BRK1Q8WUW1 75 aa8□□□□□ -1.13
CDH1-214ENST00000621016 CNFNQ9BYD5 112 aa8□□□□□ -1.13
CDH1-214ENST00000621016 IGLV2-18A0A075B6J9 118 aa7.99□□□□□ -1.13
CDH1-214ENST00000621016 COX7CP15954 63 aa7.99□□□□□ -1.13
CDH1-214ENST00000621016 COX8CQ7Z4L0 72 aa7.99□□□□□ -1.13
CDH1-214ENST00000621016 OPRPNQ99935 248 aaPredicted RBP7.98□□□□□ -1.13
CDH1-214ENST00000621016 MUC4Q99102 2169 aa7.98□□□□□ -1.13
CDH1-214ENST00000621016 ADARB2-AS1A8MUL3 147 aa7.98□□□□□ -1.13
CDH1-214ENST00000621016 SPINK13Q1W4C9 94 aa7.98□□□□□ -1.13
CDH1-214ENST00000621016 FN1P02751 2386 aaKnown RBP7.98□□□□□ -1.13
CDH1-214ENST00000621016 FAM223BA6NKX1 122 aa7.98□□□□□ -1.13
CDH1-214ENST00000621016 SYNJ2BPP57105 145 aa7.98□□□□□ -1.13
CDH1-214ENST00000621016 FAM223AQ8IWN6 122 aa7.98□□□□□ -1.13
CDH1-214ENST00000621016 SMCR5Q8TEV8 140 aa7.98□□□□□ -1.13
CDH1-214ENST00000621016 DPH3P1Q9H4G8 78 aa7.98□□□□□ -1.13
CDH1-214ENST00000621016 A0A087WVE0 104 aa7.97□□□□□ -1.13
CDH1-214ENST00000621016 ATXN8Q156A1 80 aa7.97□□□□□ -1.13
CDH1-214ENST00000621016 DAZ1Q9NQZ3 744 aaKnown RBP7.97□□□□□ -1.13
CDH1-214ENST00000621016 IGKV3D-7A0A0C4DH55 119 aa7.97□□□□□ -1.13
CDH1-214ENST00000621016 F8VRH5 84 aa7.97□□□□□ -1.13
CDH1-214ENST00000621016 NDUFA4O00483 81 aa7.97□□□□□ -1.13
CDH1-214ENST00000621016 PRB1P04280 392 aa7.97□□□□□ -1.13
CDH1-214ENST00000621016 RPL13AP40429 203 aaKnown RBP7.97□□□□□ -1.13
CDH1-214ENST00000621016 DEFB136Q30KP8 78 aa7.97□□□□□ -1.13
CDH1-214ENST00000621016 PRO0628Q9UI54 55 aa7.97□□□□□ -1.13
CDH1-214ENST00000621016 SDIM1Q6ZPB5 146 aa7.96□□□□□ -1.13
CDH1-214ENST00000621016 TP53TG1Q9Y2A0 90 aa7.96□□□□□ -1.13
CDH1-214ENST00000621016 U3KQE9 123 aa7.96□□□□□ -1.13
CDH1-214ENST00000621016 MSMBP08118 114 aa7.96□□□□□ -1.14
CDH1-214ENST00000621016 RNASE3P12724 160 aaKnown RBP7.96□□□□□ -1.14
CDH1-214ENST00000621016 C11orf44Q8N8P7 122 aa7.96□□□□□ -1.14
CDH1-214ENST00000621016 KNCNA6PVL3 124 aa7.96□□□□□ -1.14
CDH1-214ENST00000621016 MALP21145 153 aa7.96□□□□□ -1.14
CDH1-214ENST00000621016 A0A0J9YY99 117 aa7.95□□□□□ -1.14
CDH1-214ENST00000621016 H7C423 109 aa7.95□□□□□ -1.14
CDH1-214ENST00000621016 J3QQQ9 107 aa7.95□□□□□ -1.14
CDH1-214ENST00000621016 PLNP26678 52 aa7.95□□□□□ -1.14
CDH1-214ENST00000621016 DEFB112Q30KQ8 113 aa7.95□□□□□ -1.14
CDH1-214ENST00000621016 HIVEP2P31629 2446 aa7.95□□□□□ -1.14
CDH1-214ENST00000621016 EIF4EBP3O60516 100 aaPredicted RBP7.95□□□□□ -1.14
CDH1-214ENST00000621016 IGHV3-33P01772 117 aa7.95□□□□□ -1.14
CDH1-214ENST00000621016 ZNRF2Q8NHG8 242 aa7.95□□□□□ -1.14
CDH1-214ENST00000621016 TRBV10-2A0A0K0K1G8 114 aa7.95□□□□□ -1.14
CDH1-214ENST00000621016 TRIAP1O43715 76 aa7.95□□□□□ -1.14
CDH1-214ENST00000621016 RNASE13Q5GAN3 156 aaKnown RBP7.95□□□□□ -1.14
CDH1-214ENST00000621016 C1orf195Q5TG92 126 aa7.95□□□□□ -1.14
CDH1-214ENST00000621016 IGHG2P01859 326 aa7.94□□□□□ -1.14
CDH1-214ENST00000621016 ORMDL2Q53FV1 153 aa7.94□□□□□ -1.14
CDH1-214ENST00000621016 TMEM190Q8WZ59 177 aa7.94□□□□□ -1.14
CDH1-214ENST00000621016 PSMG3-AS1Q96PY0 264 aa7.94□□□□□ -1.14
CDH1-214ENST00000621016 TMEM86BQ8N661 226 aa7.94□□□□□ -1.14
CDH1-214ENST00000621016 SDHAF1A6NFY7 115 aa7.93□□□□□ -1.14
CDH1-214ENST00000621016 TSPEAR-AS2P59090 65 aa7.93□□□□□ -1.14
CDH1-214ENST00000621016 MUSTN1Q8IVN3 82 aa7.93□□□□□ -1.14
CDH1-214ENST00000621016 RETNQ9HD89 108 aa7.93□□□□□ -1.14
CDH1-214ENST00000621016 TRBV7-7A0A0K0K1E9 115 aa7.93□□□□□ -1.14
CDH1-214ENST00000621016 IGHV3-30P01768 117 aa7.93□□□□□ -1.14
CDH1-214ENST00000621016 IGHV3-30-5P0DP03 117 aa7.93□□□□□ -1.14
CDH1-214ENST00000621016 RPS28P62857 69 aaKnown RBP7.93□□□□□ -1.14
CDH1-214ENST00000621016 LINC01561Q8N1V8 128 aa7.93□□□□□ -1.14
CDH1-214ENST00000621016 USP24Q9UPU5 2620 aa7.93□□□□□ -1.14
CDH1-214ENST00000621016 SUMO4Q6EEV6 95 aa7.93□□□□□ -1.14
CDH1-214ENST00000621016 USMG5Q96IX5 58 aa7.93□□□□□ -1.14
CDH1-214ENST00000621016 FLNAP21333 2647 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 162.3 ms