RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 H0Y9J4 135 aa15.19■□□□□ 0.02
FGFR1-241ENST00000619564 HIGD2AQ9BW72 106 aa15.19■□□□□ 0.02
FGFR1-241ENST00000619564 CRYGBP07316 175 aa15.18■□□□□ 0.02
FGFR1-241ENST00000619564 LINC00482Q8N8I6 264 aa15.18■□□□□ 0.02
FGFR1-241ENST00000619564 LY6LH3BQJ8 138 aa15.18■□□□□ 0.02
FGFR1-241ENST00000619564 TDRG1Q3Y452 100 aa15.18■□□□□ 0.02
FGFR1-241ENST00000619564 TRBV10-2A0A0K0K1G8 114 aa15.18■□□□□ 0.02
FGFR1-241ENST00000619564 C20orf173Q96LM9 149 aa15.18■□□□□ 0.02
FGFR1-241ENST00000619564 FRMD6-AS1P0C7T7 363 aa15.17■□□□□ 0.02
FGFR1-241ENST00000619564 PDE6GP18545 87 aa15.17■□□□□ 0.02
FGFR1-241ENST00000619564 MIAQ16674 131 aa15.17■□□□□ 0.02
FGFR1-241ENST00000619564 C1orf229Q6ZS94 237 aaPredicted RBP15.17■□□□□ 0.02
FGFR1-241ENST00000619564 CSPG4Q6UVK1 2322 aa15.17■□□□□ 0.02
FGFR1-241ENST00000619564 IGLC6P0CF74 106 aa15.16■□□□□ 0.02
FGFR1-241ENST00000619564 C5orf47Q569G3 176 aa15.16■□□□□ 0.02
FGFR1-241ENST00000619564 C14orf132Q9NPU4 83 aa15.16■□□□□ 0.02
FGFR1-241ENST00000619564 FREM1Q5H8C1 2179 aa15.16■□□□□ 0.02
FGFR1-241ENST00000619564 DENND4AQ7Z401 1863 aa15.16■□□□□ 0.02
FGFR1-241ENST00000619564 H3BT86 120 aa15.16■□□□□ 0.02
FGFR1-241ENST00000619564 ATOX1O00244 68 aa15.15■□□□□ 0.02
FGFR1-241ENST00000619564 LINC00467Q9BRT7 94 aa15.15■□□□□ 0.02
FGFR1-241ENST00000619564 A0A1B0GXF2 115 aa15.15■□□□□ 0.02
FGFR1-241ENST00000619564 PSMG3-AS1Q96PY0 264 aa15.14■□□□□ 0.01
FGFR1-241ENST00000619564 LINC00322Q6ZN03 302 aaPredicted RBP15.14■□□□□ 0.01
FGFR1-241ENST00000619564 ZFAND3Q9H8U3 227 aa15.14■□□□□ 0.01
FGFR1-241ENST00000619564 PTPN13Q12923 2485 aa15.14■□□□□ 0.01
FGFR1-241ENST00000619564 KIR2DL5BQ8NHK3 375 aa15.13■□□□□ 0.01
FGFR1-241ENST00000619564 NEXN-AS1Q8NBZ9 246 aa15.13■□□□□ 0.01
FGFR1-241ENST00000619564 ATRXP46100 2492 aa15.13■□□□□ 0.01
FGFR1-241ENST00000619564 A0A087WZ39 114 aa15.13■□□□□ 0.01
FGFR1-241ENST00000619564 C10orf99Q6UWK7 81 aa15.13■□□□□ 0.01
FGFR1-241ENST00000619564 IGLV2-8P01709 118 aa15.12■□□□□ 0.01
FGFR1-241ENST00000619564 Q6ZPA2 131 aa15.12■□□□□ 0.01
FGFR1-241ENST00000619564 TRAV10A0A0B4J240 114 aa15.12■□□□□ 0.01
FGFR1-241ENST00000619564 ZNF702PQ9H963 129 aa15.12■□□□□ 0.01
FGFR1-241ENST00000619564 FAM19A1Q7Z5A9 133 aa15.11■□□□□ 0.01
FGFR1-241ENST00000619564 SONP18583 2426 aaKnown RBP15.11■□□□□ 0.01
FGFR1-241ENST00000619564 A0A0J9YXY3 114 aa15.11■□□□□ 0.01
FGFR1-241ENST00000619564 CFAP126Q5VTH2 177 aa15.11■□□□□ 0.01
FGFR1-241ENST00000619564 TRBV6-4A0A1B0GX49 114 aa15.11■□□□□ 0.01
FGFR1-241ENST00000619564 LRCOL1A6NCL2 159 aa15.11■□□□□ 0.01
FGFR1-241ENST00000619564 EIF4EBP1Q13541 118 aaPredicted RBP15.1■□□□□ 0.01
FGFR1-241ENST00000619564 OBSL1O75147 1896 aa15.1■□□□□ 0.01
FGFR1-241ENST00000619564 PRB2P02812 416 aaPredicted RBP15.1■□□□□ 0.01
FGFR1-241ENST00000619564 WFDC2Q14508 124 aa15.1■□□□□ 0.01
FGFR1-241ENST00000619564 HIST2H2BDQ6DRA6 164 aa15.1■□□□□ 0.01
FGFR1-241ENST00000619564 TRBV6-8A0A0A6YYG3 113 aa15.1■□□□□ 0.01
FGFR1-241ENST00000619564 LINC01006Q8NI28 216 aa15.1■□□□□ 0.01
FGFR1-241ENST00000619564 MLST8Q9BVC4 326 aa15.09■□□□□ 0.01
FGFR1-241ENST00000619564 IGKV2D-26A0A0A0MRZ7 120 aa15.09■□□□□ 0.01
FGFR1-241ENST00000619564 SMIM20Q8N5G0 67 aa15.09■□□□□ 0.01
FGFR1-241ENST00000619564 FAM236AA0A1B0GUQ0 79 aa15.08■□□□□ 0
FGFR1-241ENST00000619564 FAM236BA0A1B0GV22 79 aa15.08■□□□□ 0
FGFR1-241ENST00000619564 SPATA12Q7Z6I5 190 aa15.08■□□□□ 0
FGFR1-241ENST00000619564 CDKN2A-AS1Q9UH64 79 aa15.08■□□□□ 0
FGFR1-241ENST00000619564 TNRC6BQ9UPQ9 1833 aaKnown RBP15.08■□□□□ 0
FGFR1-241ENST00000619564 CACNA1AO00555 2505 aa15.07■□□□□ 0
FGFR1-241ENST00000619564 CRIP3Q6Q6R5 217 aa15.06■□□□□ 0
FGFR1-241ENST00000619564 GDF5OSQ5U4N7 250 aa15.06■□□□□ 0
FGFR1-241ENST00000619564 WNK1Q9H4A3 2382 aa15.06■□□□□ 0
FGFR1-241ENST00000619564 FOXI1Q12951 378 aa15.06■□□□□ 0
FGFR1-241ENST00000619564 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.05■□□□□ 0
FGFR1-241ENST00000619564 TAX1BP3O14907 124 aa15.05■□□□□ -0
FGFR1-241ENST00000619564 RNASE8Q8TDE3 154 aaKnown RBP15.05■□□□□ -0
FGFR1-241ENST00000619564 IGLV4-3A0A075B6K6 122 aa15.05■□□□□ -0
FGFR1-241ENST00000619564 A0A096LNI7 61 aa15.05■□□□□ -0
FGFR1-241ENST00000619564 DSCAMO60469 2012 aa15.04■□□□□ -0
FGFR1-241ENST00000619564 B5MCH6 92 aa15.04■□□□□ -0
FGFR1-241ENST00000619564 M0QY20 66 aa15.04■□□□□ -0
FGFR1-241ENST00000619564 IBA57-AS1B1ANH7 110 aa15.04■□□□□ -0
FGFR1-241ENST00000619564 C7orf33Q8WU49 177 aa15.04■□□□□ -0
FGFR1-241ENST00000619564 SYCNQ0VAF6 134 aa15.03■□□□□ -0
FGFR1-241ENST00000619564 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.03■□□□□ -0
FGFR1-241ENST00000619564 BBC3Q96PG8 261 aaPredicted RBP15.03■□□□□ -0
FGFR1-241ENST00000619564 ZNF106Q9H2Y7 1883 aaKnown RBP15.03■□□□□ -0
FGFR1-241ENST00000619564 FAM19A5Q7Z5A7 132 aaPredicted RBP15.03■□□□□ -0
FGFR1-241ENST00000619564 ZNF295-AS1Q8N0V1 137 aa15.03■□□□□ -0
FGFR1-241ENST00000619564 BPY2O14599 106 aa15.03■□□□□ -0
FGFR1-241ENST00000619564 COL4A4P53420 1690 aaPredicted RBP15.03■□□□□ -0
FGFR1-241ENST00000619564 NCOA6Q14686 2063 aaPredicted RBP15.02■□□□□ -0
FGFR1-241ENST00000619564 IGKV4-1P06312 121 aa15.02■□□□□ -0
FGFR1-241ENST00000619564 Q8N6K4 173 aa15.02□□□□□ -0.01
FGFR1-241ENST00000619564 ZNF22P17026 224 aaPredicted RBP15.01□□□□□ -0.01
FGFR1-241ENST00000619564 PLA2G2AP14555 144 aa15.01□□□□□ -0.01
FGFR1-241ENST00000619564 TMEM223A0PJW6 202 aa15.01□□□□□ -0.01
FGFR1-241ENST00000619564 SEC61GP60059 68 aa15.01□□□□□ -0.01
FGFR1-241ENST00000619564 KIAA1549LQ6ZVL6 1849 aa15□□□□□ -0.01
FGFR1-241ENST00000619564 Q8N976 141 aa14.99□□□□□ -0.01
FGFR1-241ENST00000619564 SS18L2Q9UHA2 77 aa14.99□□□□□ -0.01
FGFR1-241ENST00000619564 XAGE1AQ9HD64 81 aa14.99□□□□□ -0.01
FGFR1-241ENST00000619564 PROK1P58294 105 aa14.98□□□□□ -0.01
FGFR1-241ENST00000619564 SPANXB1Q9NS25 103 aaPredicted RBP14.98□□□□□ -0.01
FGFR1-241ENST00000619564 ALPK3Q96L96 1907 aa14.98□□□□□ -0.01
FGFR1-241ENST00000619564 IGLV2-18A0A075B6J9 118 aa14.98□□□□□ -0.01
FGFR1-241ENST00000619564 KPRPQ5T749 579 aaPredicted RBP14.98□□□□□ -0.01
FGFR1-241ENST00000619564 TCL1BO95988 128 aa14.97□□□□□ -0.01
FGFR1-241ENST00000619564 CRIP1P50238 77 aa14.97□□□□□ -0.01
FGFR1-241ENST00000619564 MBD6Q96DN6 1003 aa14.97□□□□□ -0.01
FGFR1-241ENST00000619564 RBX1P62877 108 aa14.96□□□□□ -0.01
FGFR1-241ENST00000619564 C18orf65Q6ZTR6 163 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms