RNA–Protein interactions for RNA: ENST00000618562.1

VEGFC-202, Transcript of vascular endothelial growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VEGFC, Length 2,064 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-202ENST00000618562 C19orf73Q9NVV2 129 aa18.43■□□□□ 0.54
VEGFC-202ENST00000618562 ATRQ13535 2644 aa18.43■□□□□ 0.54
VEGFC-202ENST00000618562 CMC4P56277 68 aaPredicted RBP18.42■□□□□ 0.54
VEGFC-202ENST00000618562 TEP1Q99973 2627 aaKnown RBP18.42■□□□□ 0.54
VEGFC-202ENST00000618562 SPATA3Q8NHX4 192 aa18.42■□□□□ 0.54
VEGFC-202ENST00000618562 FAM110AQ9BQ89 295 aa18.42■□□□□ 0.54
VEGFC-202ENST00000618562 PRM2P04554 102 aa18.41■□□□□ 0.54
VEGFC-202ENST00000618562 HTN1P15515 57 aa18.41■□□□□ 0.54
VEGFC-202ENST00000618562 WFDC10AQ9H1F0 79 aa18.41■□□□□ 0.54
VEGFC-202ENST00000618562 ZNF815PA8K554 130 aa18.4■□□□□ 0.54
VEGFC-202ENST00000618562 I3L3M4 83 aa18.4■□□□□ 0.54
VEGFC-202ENST00000618562 INSP01308 110 aa18.4■□□□□ 0.54
VEGFC-202ENST00000618562 PIK3CD-AS1Q5SR53 167 aa18.4■□□□□ 0.54
VEGFC-202ENST00000618562 DEFB104AQ8WTQ1 72 aa18.4■□□□□ 0.54
VEGFC-202ENST00000618562 XCL2Q9UBD3 114 aa18.4■□□□□ 0.54
VEGFC-202ENST00000618562 C12orf74Q32Q52 190 aa18.38■□□□□ 0.53
VEGFC-202ENST00000618562 A0A1B0GWB2 263 aa18.38■□□□□ 0.53
VEGFC-202ENST00000618562 C20orf203Q8NBC4 194 aa18.37■□□□□ 0.53
VEGFC-202ENST00000618562 PTH2Q96A98 100 aa18.37■□□□□ 0.53
VEGFC-202ENST00000618562 LINC01587Q99440 93 aa18.37■□□□□ 0.53
VEGFC-202ENST00000618562 LINC00467Q9BRT7 94 aa18.37■□□□□ 0.53
VEGFC-202ENST00000618562 P0DMU3 169 aa18.36■□□□□ 0.53
VEGFC-202ENST00000618562 FAM231AP0DMU4 169 aa18.36■□□□□ 0.53
VEGFC-202ENST00000618562 FAM231CP0DMU5 169 aa18.36■□□□□ 0.53
VEGFC-202ENST00000618562 A8MWV9 139 aa18.35■□□□□ 0.53
VEGFC-202ENST00000618562 IGLL5B9A064 214 aa18.35■□□□□ 0.53
VEGFC-202ENST00000618562 M0R2P5 195 aa18.35■□□□□ 0.53
VEGFC-202ENST00000618562 ZNF415Q09FC8 603 aa18.35■□□□□ 0.53
VEGFC-202ENST00000618562 NFE4Q86UQ8 179 aa18.35■□□□□ 0.53
VEGFC-202ENST00000618562 K7ERU9 68 aa18.35■□□□□ 0.53
VEGFC-202ENST00000618562 EMP1P54849 157 aa18.35■□□□□ 0.53
VEGFC-202ENST00000618562 SCGB1D4Q6XE38 83 aa18.35■□□□□ 0.53
VEGFC-202ENST00000618562 ZNRF2Q8NHG8 242 aa18.34■□□□□ 0.53
VEGFC-202ENST00000618562 C1orf158Q8N1D5 194 aa18.34■□□□□ 0.53
VEGFC-202ENST00000618562 TMEM170BQ5T4T1 132 aa18.32■□□□□ 0.52
VEGFC-202ENST00000618562 ZNF479Q96JC4 524 aa18.32■□□□□ 0.52
VEGFC-202ENST00000618562 GIG44P09565 113 aaPredicted RBP18.32■□□□□ 0.52
VEGFC-202ENST00000618562 C11orf72Q8NBR9 251 aa18.32■□□□□ 0.52
VEGFC-202ENST00000618562 PLEKHB2Q96CS7 222 aa18.32■□□□□ 0.52
VEGFC-202ENST00000618562 NOTCH3Q9UM47 2321 aa18.31■□□□□ 0.52
VEGFC-202ENST00000618562 TMEM238LA0A1B0GVL6 79 aa18.31■□□□□ 0.52
VEGFC-202ENST00000618562 A6NJY4 79 aa18.31■□□□□ 0.52
VEGFC-202ENST00000618562 INSL3P51460 131 aa18.31■□□□□ 0.52
VEGFC-202ENST00000618562 RNF151Q2KHN1 245 aa18.3■□□□□ 0.52
VEGFC-202ENST00000618562 C9orf66Q5T8R8 295 aa18.3■□□□□ 0.52
VEGFC-202ENST00000618562 RPL35AP18077 110 aaKnown RBP18.29■□□□□ 0.52
VEGFC-202ENST00000618562 RRN3P1Q2M238 152 aa18.29■□□□□ 0.52
VEGFC-202ENST00000618562 PYGO1Q9Y3Y4 419 aa18.29■□□□□ 0.52
VEGFC-202ENST00000618562 IGHV3OR16-12A0A075B7B8 117 aa18.28■□□□□ 0.52
VEGFC-202ENST00000618562 SPXQ9BT56 116 aa18.28■□□□□ 0.52
VEGFC-202ENST00000618562 IGLV4-3A0A075B6K6 122 aa18.27■□□□□ 0.52
VEGFC-202ENST00000618562 A0A0J9YY99 117 aa18.27■□□□□ 0.52
VEGFC-202ENST00000618562 AZU1P20160 251 aa18.27■□□□□ 0.52
VEGFC-202ENST00000618562 SRSF9Q13242 221 aaKnown RBP eCLIP18.27■□□□□ 0.52
VEGFC-202ENST00000618562 OPRPNQ99935 248 aaPredicted RBP18.27■□□□□ 0.52
VEGFC-202ENST00000618562 NACAE9PAV3 2078 aa18.27■□□□□ 0.52
VEGFC-202ENST00000618562 IGHV3-73A0A0B4J1V6 119 aa18.27■□□□□ 0.51
VEGFC-202ENST00000618562 RHODO00212 210 aa18.27■□□□□ 0.51
VEGFC-202ENST00000618562 KRTAP24-1Q3LI83 254 aa18.27■□□□□ 0.51
VEGFC-202ENST00000618562 SPANXB1Q9NS25 103 aaPredicted RBP18.27■□□□□ 0.51
VEGFC-202ENST00000618562 TNFRSF18Q9Y5U5 241 aa18.27■□□□□ 0.51
VEGFC-202ENST00000618562 TSPEAR-AS2P59090 65 aa18.26■□□□□ 0.51
VEGFC-202ENST00000618562 CRYBA4P53673 196 aa18.26■□□□□ 0.51
VEGFC-202ENST00000618562 CFAP126Q5VTH2 177 aa18.26■□□□□ 0.51
VEGFC-202ENST00000618562 VCX2Q9H322 139 aa18.26■□□□□ 0.51
VEGFC-202ENST00000618562 J3QQQ9 107 aa18.25■□□□□ 0.51
VEGFC-202ENST00000618562 TMEM223A0PJW6 202 aa18.24■□□□□ 0.51
VEGFC-202ENST00000618562 UBE2D1P51668 147 aa18.24■□□□□ 0.51
VEGFC-202ENST00000618562 AMELXQ99217 191 aa18.24■□□□□ 0.51
VEGFC-202ENST00000618562 LEPROTO15243 131 aa18.23■□□□□ 0.51
VEGFC-202ENST00000618562 LGALS3P17931 250 aaKnown RBP18.22■□□□□ 0.51
VEGFC-202ENST00000618562 VPS25Q9BRG1 176 aa18.22■□□□□ 0.51
VEGFC-202ENST00000618562 ZNF22P17026 224 aaPredicted RBP18.22■□□□□ 0.51
VEGFC-202ENST00000618562 SLC25A29Q8N8R3 303 aa18.22■□□□□ 0.51
VEGFC-202ENST00000618562 CSNK1G2-AS1Q8NCQ2 148 aa18.21■□□□□ 0.51
VEGFC-202ENST00000618562 DNAJC30Q96LL9 226 aa18.21■□□□□ 0.51
VEGFC-202ENST00000618562 IGHV3-53P01767 116 aa18.21■□□□□ 0.51
VEGFC-202ENST00000618562 IL17DQ8TAD2 202 aa18.21■□□□□ 0.51
VEGFC-202ENST00000618562 WFDC9Q8NEX5 89 aa18.2■□□□□ 0.5
VEGFC-202ENST00000618562 C1QTNF4Q9BXJ3 329 aa18.2■□□□□ 0.5
VEGFC-202ENST00000618562 MRPL16Q9NX20 251 aaKnown RBP18.2■□□□□ 0.5
VEGFC-202ENST00000618562 TRRAPQ9Y4A5 3859 aa18.2■□□□□ 0.5
VEGFC-202ENST00000618562 Q6ZSN1 163 aa18.19■□□□□ 0.5
VEGFC-202ENST00000618562 A0A0J9YXV3 536 aa18.19■□□□□ 0.5
VEGFC-202ENST00000618562 RS1O15537 224 aa18.19■□□□□ 0.5
VEGFC-202ENST00000618562 FBN1P35555 2871 aaKnown RBP18.18■□□□□ 0.5
VEGFC-202ENST00000618562 F8W1H4 67 aa18.18■□□□□ 0.5
VEGFC-202ENST00000618562 PGPEP1Q9NXJ5 209 aa18.18■□□□□ 0.5
VEGFC-202ENST00000618562 G3V4G9 280 aa18.18■□□□□ 0.5
VEGFC-202ENST00000618562 TMEM263Q8WUH6 116 aaKnown RBP18.18■□□□□ 0.5
VEGFC-202ENST00000618562 FAM104AQ969W3 186 aa18.18■□□□□ 0.5
VEGFC-202ENST00000618562 SPANXA1Q9NS26 97 aa18.18■□□□□ 0.5
VEGFC-202ENST00000618562 IGHV3-30P01768 117 aa18.17■□□□□ 0.5
VEGFC-202ENST00000618562 IGHV3-30-5P0DP03 117 aa18.17■□□□□ 0.5
VEGFC-202ENST00000618562 PCP4P48539 62 aa18.17■□□□□ 0.5
VEGFC-202ENST00000618562 MRPS36P82909 103 aaKnown RBP18.16■□□□□ 0.5
VEGFC-202ENST00000618562 CHCHD7Q9BUK0 85 aa18.16■□□□□ 0.5
VEGFC-202ENST00000618562 PRIMA1Q86XR5 153 aa18.14■□□□□ 0.5
VEGFC-202ENST00000618562 Q9UF83 564 aa18.14■□□□□ 0.5
VEGFC-202ENST00000618562 H3BMG7 143 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms