RNA–Protein interactions for RNA: ENST00000618521.4

SH2B1-216, Transcript of SH2B adaptor protein 1, humanhuman

TSL 1 (best) BASIC

Gene SH2B1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B1-216ENST00000618521 FAM223BA6NKX1 122 aa13.02□□□□□ -0.33
SH2B1-216ENST00000618521 IGHV4-59P01825 116 aa13.02□□□□□ -0.33
SH2B1-216ENST00000618521 P0DMU3 169 aa13.02□□□□□ -0.33
SH2B1-216ENST00000618521 FAM231AP0DMU4 169 aa13.02□□□□□ -0.33
SH2B1-216ENST00000618521 FAM231CP0DMU5 169 aa13.02□□□□□ -0.33
SH2B1-216ENST00000618521 DEFB112Q30KQ8 113 aa13.02□□□□□ -0.33
SH2B1-216ENST00000618521 C19orf54Q5BKX5 351 aa13.02□□□□□ -0.33
SH2B1-216ENST00000618521 MUSTN1Q8IVN3 82 aa13.02□□□□□ -0.33
SH2B1-216ENST00000618521 FAM223AQ8IWN6 122 aa13.02□□□□□ -0.33
SH2B1-216ENST00000618521 LINC00477Q96M19 166 aa13.02□□□□□ -0.33
SH2B1-216ENST00000618521 TRAV21A0A0B4J279 112 aa13.02□□□□□ -0.33
SH2B1-216ENST00000618521 LGALS3P17931 250 aaKnown RBP13.02□□□□□ -0.33
SH2B1-216ENST00000618521 DPH3P1Q9H4G8 78 aa13.02□□□□□ -0.33
SH2B1-216ENST00000618521 PMVKQ15126 192 aa13.01□□□□□ -0.33
SH2B1-216ENST00000618521 TRBV10-2A0A0K0K1G8 114 aa13.01□□□□□ -0.33
SH2B1-216ENST00000618521 PAPPA-AS1Q5QFB9 102 aa13.01□□□□□ -0.33
SH2B1-216ENST00000618521 LENEPQ9Y5L5 61 aa13.01□□□□□ -0.33
SH2B1-216ENST00000618521 IGHV3-64A0A075B6Q5 118 aa13□□□□□ -0.33
SH2B1-216ENST00000618521 SOCS3O14543 225 aa13□□□□□ -0.33
SH2B1-216ENST00000618521 IGHV4-31P0DP07 118 aa13□□□□□ -0.33
SH2B1-216ENST00000618521 DUX3Q96PT4 197 aa13□□□□□ -0.33
SH2B1-216ENST00000618521 LINC01587Q99440 93 aa13□□□□□ -0.33
SH2B1-216ENST00000618521 C2orf82Q6UX34 121 aa13□□□□□ -0.33
SH2B1-216ENST00000618521 IGIPA6NJ69 53 aa12.99□□□□□ -0.33
SH2B1-216ENST00000618521 CITED2Q99967 270 aaPredicted RBP12.99□□□□□ -0.33
SH2B1-216ENST00000618521 SPANXA1Q9NS26 97 aa12.99□□□□□ -0.33
SH2B1-216ENST00000618521 MUC4Q99102 2169 aa12.99□□□□□ -0.33
SH2B1-216ENST00000618521 AKAP9Q99996 3911 aa12.99□□□□□ -0.33
SH2B1-216ENST00000618521 OVOL1O14753 267 aa12.99□□□□□ -0.33
SH2B1-216ENST00000618521 TRIAP1O43715 76 aa12.99□□□□□ -0.33
SH2B1-216ENST00000618521 A0A0B4J2C4 111 aa12.98□□□□□ -0.33
SH2B1-216ENST00000618521 NDUFA4O00483 81 aa12.98□□□□□ -0.33
SH2B1-216ENST00000618521 KRTAP1-3Q8IUG1 177 aa12.98□□□□□ -0.33
SH2B1-216ENST00000618521 TMEM126AQ9H061 195 aa12.98□□□□□ -0.33
SH2B1-216ENST00000618521 RNASE3P12724 160 aaKnown RBP12.97□□□□□ -0.33
SH2B1-216ENST00000618521 EDN2P20800 178 aa12.97□□□□□ -0.33
SH2B1-216ENST00000618521 H7C423 109 aa12.96□□□□□ -0.33
SH2B1-216ENST00000618521 A6NDX4 124 aa12.95□□□□□ -0.34
SH2B1-216ENST00000618521 SMIM9A6NGZ8 99 aa12.95□□□□□ -0.34
SH2B1-216ENST00000618521 LINC00694P0DN24 101 aa12.95□□□□□ -0.34
SH2B1-216ENST00000618521 C10orf99Q6UWK7 81 aa12.95□□□□□ -0.34
SH2B1-216ENST00000618521 RHPN1-AS1Q9BWJ2 59 aa12.95□□□□□ -0.34
SH2B1-216ENST00000618521 JPT2Q9H910 190 aa12.95□□□□□ -0.34
SH2B1-216ENST00000618521 LOC107984640A0A0U1RRK4 108 aa12.94□□□□□ -0.34
SH2B1-216ENST00000618521 MRPL23Q16540 153 aaKnown RBP12.94□□□□□ -0.34
SH2B1-216ENST00000618521 HIST2H2BDQ6DRA6 164 aa12.94□□□□□ -0.34
SH2B1-216ENST00000618521 FAM19A4Q96LR4 140 aa12.94□□□□□ -0.34
SH2B1-216ENST00000618521 OPRPNQ99935 248 aaPredicted RBP12.94□□□□□ -0.34
SH2B1-216ENST00000618521 ZNF22P17026 224 aaPredicted RBP12.94□□□□□ -0.34
SH2B1-216ENST00000618521 FAM236AA0A1B0GUQ0 79 aa12.93□□□□□ -0.34
SH2B1-216ENST00000618521 FAM236BA0A1B0GV22 79 aa12.93□□□□□ -0.34
SH2B1-216ENST00000618521 ZNF876PQ49A33 203 aa12.93□□□□□ -0.34
SH2B1-216ENST00000618521 TRGV11A0A075B6L2 103 aa12.93□□□□□ -0.34
SH2B1-216ENST00000618521 TRBV30A0A0K0K1B3 111 aa12.93□□□□□ -0.34
SH2B1-216ENST00000618521 LINC01600Q96MT4 127 aa12.93□□□□□ -0.34
SH2B1-216ENST00000618521 ZNF580Q9UK33 172 aa12.93□□□□□ -0.34
SH2B1-216ENST00000618521 FLNBO75369 2602 aaKnown RBP12.93□□□□□ -0.34
SH2B1-216ENST00000618521 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.92□□□□□ -0.34
SH2B1-216ENST00000618521 CEMP1Q6PRD7 247 aaPredicted RBP12.92□□□□□ -0.34
SH2B1-216ENST00000618521 CLEC2BQ92478 149 aa12.92□□□□□ -0.34
SH2B1-216ENST00000618521 ADARB2-AS1A8MUL3 147 aa12.92□□□□□ -0.34
SH2B1-216ENST00000618521 A0A087WWL8 130 aa12.91□□□□□ -0.34
SH2B1-216ENST00000618521 IGHG2P01859 326 aa12.91□□□□□ -0.34
SH2B1-216ENST00000618521 Q6ZSV7 163 aa12.91□□□□□ -0.34
SH2B1-216ENST00000618521 USMG5Q96IX5 58 aa12.91□□□□□ -0.34
SH2B1-216ENST00000618521 PRSS2P07478 247 aa12.91□□□□□ -0.34
SH2B1-216ENST00000618521 TMEM141Q96I45 108 aa12.91□□□□□ -0.34
SH2B1-216ENST00000618521 LEPROTO15243 131 aa12.9□□□□□ -0.34
SH2B1-216ENST00000618521 SORL1Q92673 2214 aa12.9□□□□□ -0.34
SH2B1-216ENST00000618521 TRBV7-7A0A0K0K1E9 115 aa12.9□□□□□ -0.34
SH2B1-216ENST00000618521 LINC00315P59091 139 aa12.9□□□□□ -0.34
SH2B1-216ENST00000618521 TMEM223A0PJW6 202 aa12.89□□□□□ -0.35
SH2B1-216ENST00000618521 M0R2P5 195 aa12.89□□□□□ -0.35
SH2B1-216ENST00000618521 MED14OSP0DP75 135 aa12.89□□□□□ -0.35
SH2B1-216ENST00000618521 APRG1Q8IVJ8 170 aa12.89□□□□□ -0.35
SH2B1-216ENST00000618521 TIMM17AQ99595 171 aa12.89□□□□□ -0.35
SH2B1-216ENST00000618521 ICOSQ9Y6W8 199 aa12.89□□□□□ -0.35
SH2B1-216ENST00000618521 KIF25-AS1Q9Y6Z4 181 aa12.89□□□□□ -0.35
SH2B1-216ENST00000618521 PPP1R17O96001 155 aa12.89□□□□□ -0.35
SH2B1-216ENST00000618521 C9orf153Q5TBE3 101 aa12.89□□□□□ -0.35
SH2B1-216ENST00000618521 TRAV12-3A0A0B4J271 114 aa12.89□□□□□ -0.35
SH2B1-216ENST00000618521 F5H697 171 aa12.89□□□□□ -0.35
SH2B1-216ENST00000618521 WIPF1O43516 503 aa12.89□□□□□ -0.35
SH2B1-216ENST00000618521 TMEM101Q96IK0 257 aa12.89□□□□□ -0.35
SH2B1-216ENST00000618521 DAZ1Q9NQZ3 744 aaKnown RBP12.89□□□□□ -0.35
SH2B1-216ENST00000618521 POLR2KP53803 58 aaKnown RBP12.88□□□□□ -0.35
SH2B1-216ENST00000618521 SUMO4Q6EEV6 95 aa12.88□□□□□ -0.35
SH2B1-216ENST00000618521 H3BT86 120 aa12.87□□□□□ -0.35
SH2B1-216ENST00000618521 IGKV3-20P01619 116 aa12.87□□□□□ -0.35
SH2B1-216ENST00000618521 NPC2P61916 151 aa12.87□□□□□ -0.35
SH2B1-216ENST00000618521 LRRC75A-AS1Q8N1F1 130 aa12.87□□□□□ -0.35
SH2B1-216ENST00000618521 KLK5Q9Y337 293 aaPredicted RBP12.87□□□□□ -0.35
SH2B1-216ENST00000618521 A0A0J9YXY3 114 aa12.87□□□□□ -0.35
SH2B1-216ENST00000618521 FAM240AA0A1B0GVK7 77 aa12.87□□□□□ -0.35
SH2B1-216ENST00000618521 DNAJC30Q96LL9 226 aa12.87□□□□□ -0.35
SH2B1-216ENST00000618521 ZNF256Q9Y2P7 627 aaPredicted RBP12.87□□□□□ -0.35
SH2B1-216ENST00000618521 WNK1Q9H4A3 2382 aa12.86□□□□□ -0.35
SH2B1-216ENST00000618521 SDHAF1A6NFY7 115 aa12.86□□□□□ -0.35
SH2B1-216ENST00000618521 KLLNB2CW77 178 aa12.86□□□□□ -0.35
SH2B1-216ENST00000618521 FAM74A4Q5TZK3 123 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms