RNA–Protein interactions for RNA: ENST00000618450.1

CHD7-212, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

Gene CHD7, Length 4,222 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-212ENST00000618450 IGSF10Q6WRI0 2623 aa5.72□□□□□ -1.49
CHD7-212ENST00000618450 TEX15Q9BXT5 2789 aa5.72□□□□□ -1.49
CHD7-212ENST00000618450 C9JAW5 83 aa5.72□□□□□ -1.49
CHD7-212ENST00000618450 Q5PR19 223 aa5.72□□□□□ -1.49
CHD7-212ENST00000618450 LST1O00453 97 aa5.72□□□□□ -1.49
CHD7-212ENST00000618450 PRM2P04554 102 aa5.72□□□□□ -1.49
CHD7-212ENST00000618450 LYRM7Q5U5X0 104 aa5.72□□□□□ -1.49
CHD7-212ENST00000618450 IGHV4-30-2A0A087WSY4 118 aa5.72□□□□□ -1.49
CHD7-212ENST00000618450 FAM240AA0A1B0GVK7 77 aa5.72□□□□□ -1.49
CHD7-212ENST00000618450 SHISA2Q6UWI4 295 aa5.71□□□□□ -1.49
CHD7-212ENST00000618450 LGALS3P17931 250 aaKnown RBP5.71□□□□□ -1.5
CHD7-212ENST00000618450 LY6EQ16553 131 aa5.71□□□□□ -1.5
CHD7-212ENST00000618450 SPINK13Q1W4C9 94 aa5.71□□□□□ -1.5
CHD7-212ENST00000618450 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.71□□□□□ -1.51e-6■■■■□ 24.8
CHD7-212ENST00000618450 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.71□□□□□ -1.5
CHD7-212ENST00000618450 TMEM262E9PQX1 116 aa5.71□□□□□ -1.5
CHD7-212ENST00000618450 PRORYQ9H606 182 aa5.71□□□□□ -1.5
CHD7-212ENST00000618450 ICOSQ9Y6W8 199 aa5.71□□□□□ -1.5
CHD7-212ENST00000618450 IGKV3-7A0A075B6H7 116 aa5.7□□□□□ -1.5
CHD7-212ENST00000618450 PF4V1P10720 104 aa5.7□□□□□ -1.5
CHD7-212ENST00000618450 NDUFV3P56181 108 aaKnown RBP5.7□□□□□ -1.5
CHD7-212ENST00000618450 SCGB2A2Q13296 93 aa5.7□□□□□ -1.5
CHD7-212ENST00000618450 NTN5Q8WTR8 489 aaPredicted RBP5.7□□□□□ -1.5
CHD7-212ENST00000618450 CHD6Q8TD26 2715 aa5.7□□□□□ -1.5
CHD7-212ENST00000618450 TGFAP01135 160 aa5.7□□□□□ -1.5
CHD7-212ENST00000618450 COX6A2Q02221 97 aa5.7□□□□□ -1.5
CHD7-212ENST00000618450 SOSTDC1Q6X4U4 206 aa5.7□□□□□ -1.5
CHD7-212ENST00000618450 TRAV2A0A0B4J234 112 aa5.7□□□□□ -1.5
CHD7-212ENST00000618450 ADARB2-AS1A8MUL3 147 aa5.7□□□□□ -1.5
CHD7-212ENST00000618450 ID1P41134 155 aa5.7□□□□□ -1.5
CHD7-212ENST00000618450 UCNP55089 124 aa5.7□□□□□ -1.5
CHD7-212ENST00000618450 ATXN8Q156A1 80 aa5.7□□□□□ -1.5
CHD7-212ENST00000618450 FAM74A4Q5TZK3 123 aa5.7□□□□□ -1.5
CHD7-212ENST00000618450 CENPEQ02224 2701 aa5.7□□□□□ -1.5
CHD7-212ENST00000618450 TRBV7-7A0A0K0K1E9 115 aa5.69□□□□□ -1.5
CHD7-212ENST00000618450 F5H768 121 aa5.69□□□□□ -1.5
CHD7-212ENST00000618450 USP9XQ93008 2570 aaPredicted RBP5.69□□□□□ -1.5
CHD7-212ENST00000618450 IGHV3-64A0A075B6Q5 118 aa5.69□□□□□ -1.5
CHD7-212ENST00000618450 NDUFA1O15239 70 aa5.69□□□□□ -1.5
CHD7-212ENST00000618450 TIRAPP58753 221 aa5.69□□□□□ -1.5
CHD7-212ENST00000618450 ZNF625Q96I27 306 aaPredicted RBP5.69□□□□□ -1.5
CHD7-212ENST00000618450 IGHV3OR16-12A0A075B7B8 117 aa5.69□□□□□ -1.5
CHD7-212ENST00000618450 H3BMM0 161 aa5.69□□□□□ -1.5
CHD7-212ENST00000618450 MSMBP08118 114 aa5.69□□□□□ -1.5
CHD7-212ENST00000618450 IFITM1P13164 125 aa5.69□□□□□ -1.5
CHD7-212ENST00000618450 Q8N2B8 174 aa5.69□□□□□ -1.5
CHD7-212ENST00000618450 TMEM101Q96IK0 257 aa5.69□□□□□ -1.5
CHD7-212ENST00000618450 SPXQ9BT56 116 aa5.69□□□□□ -1.5
CHD7-212ENST00000618450 ZNF702PQ9H963 129 aa5.69□□□□□ -1.5
CHD7-212ENST00000618450 H3BT86 120 aa5.69□□□□□ -1.5
CHD7-212ENST00000618450 ZNF56Q15929 161 aa5.69□□□□□ -1.5
CHD7-212ENST00000618450 MRPL23Q16540 153 aaKnown RBP5.69□□□□□ -1.5
CHD7-212ENST00000618450 IGHV3-53P01767 116 aa5.68□□□□□ -1.5
CHD7-212ENST00000618450 IGHV4-59P01825 116 aa5.68□□□□□ -1.5
CHD7-212ENST00000618450 SCGB1C2P0DMR2 95 aa5.68□□□□□ -1.5
CHD7-212ENST00000618450 CD28P10747 220 aa5.68□□□□□ -1.5
CHD7-212ENST00000618450 SMCR5Q8TEV8 140 aa5.68□□□□□ -1.5
CHD7-212ENST00000618450 TIMM21Q9BVV7 248 aa5.68□□□□□ -1.5
CHD7-212ENST00000618450 SPANXA1Q9NS26 97 aa5.68□□□□□ -1.5
CHD7-212ENST00000618450 COL6A6A6NMZ7 2263 aa5.68□□□□□ -1.5
CHD7-212ENST00000618450 NBASA2RRP1 2371 aa5.68□□□□□ -1.5
CHD7-212ENST00000618450 ANK2Q01484 3957 aa5.68□□□□□ -1.5
CHD7-212ENST00000618450 F5H697 171 aa5.67□□□□□ -1.5
CHD7-212ENST00000618450 CDKN2A-AS1Q9UH64 79 aa5.67□□□□□ -1.5
CHD7-212ENST00000618450 CCDC179H3BU77 68 aa5.67□□□□□ -1.5
CHD7-212ENST00000618450 LINC00242Q5T6M2 205 aa5.67□□□□□ -1.5
CHD7-212ENST00000618450 NTM-AS1Q6ZSK4 140 aa5.67□□□□□ -1.5
CHD7-212ENST00000618450 NDUFA12Q9UI09 145 aa5.67□□□□□ -1.5
CHD7-212ENST00000618450 RS1O15537 224 aa5.67□□□□□ -1.5
CHD7-212ENST00000618450 DEFB112Q30KQ8 113 aa5.67□□□□□ -1.5
CHD7-212ENST00000618450 C18orf65Q6ZTR6 163 aa5.67□□□□□ -1.5
CHD7-212ENST00000618450 CLEC2BQ92478 149 aa5.67□□□□□ -1.5
CHD7-212ENST00000618450 CSDC2Q9Y534 153 aaKnown RBP5.67□□□□□ -1.5
CHD7-212ENST00000618450 GAGE5Q13069 117 aa5.66□□□□□ -1.5
CHD7-212ENST00000618450 GAGE6Q13070 117 aa5.66□□□□□ -1.5
CHD7-212ENST00000618450 RNASE13Q5GAN3 156 aaKnown RBP5.66□□□□□ -1.5
CHD7-212ENST00000618450 UBE2E2Q96LR5 201 aa5.66□□□□□ -1.5
CHD7-212ENST00000618450 PIMREGQ9BSJ6 248 aa5.66□□□□□ -1.5
CHD7-212ENST00000618450 CHD8Q9HCK8 2581 aa5.66□□□□□ -1.5
CHD7-212ENST00000618450 TRGV11A0A075B6L2 103 aa5.66□□□□□ -1.5
CHD7-212ENST00000618450 Q96MF0 132 aa5.66□□□□□ -1.5
CHD7-212ENST00000618450 LINC00694P0DN24 101 aa5.66□□□□□ -1.5
CHD7-212ENST00000618450 HOXD3P31249 432 aaPredicted RBP5.66□□□□□ -1.5
CHD7-212ENST00000618450 SNRPD3P62318 126 aaKnown RBP5.66□□□□□ -1.5
CHD7-212ENST00000618450 KRTAP3-3Q9BYR6 98 aa5.66□□□□□ -1.5
CHD7-212ENST00000618450 KRTAP3-2Q9BYR7 98 aa5.66□□□□□ -1.5
CHD7-212ENST00000618450 SPTA1P02549 2419 aa5.66□□□□□ -1.5
CHD7-212ENST00000618450 SMIM1B2RUZ4 78 aa5.66□□□□□ -1.5
CHD7-212ENST00000618450 SYNJ2BPP57105 145 aa5.65□□□□□ -1.5
CHD7-212ENST00000618450 LINC00308Q8TCZ7 52 aa5.65□□□□□ -1.5
CHD7-212ENST00000618450 APCP25054 2843 aa5.65□□□□□ -1.5
CHD7-212ENST00000618450 IGKV3-20P01619 116 aa5.65□□□□□ -1.51
CHD7-212ENST00000618450 LY6DQ14210 128 aa5.65□□□□□ -1.51
CHD7-212ENST00000618450 TEX29Q8N6K0 151 aa5.65□□□□□ -1.51
CHD7-212ENST00000618450 DOPEY1Q5JWR5 2465 aa5.65□□□□□ -1.51
CHD7-212ENST00000618450 SPTBN4Q9H254 2564 aa5.65□□□□□ -1.51
CHD7-212ENST00000618450 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.65□□□□□ -1.51
CHD7-212ENST00000618450 IGKV2-29A2NJV5 120 aaPredicted RBP5.65□□□□□ -1.51
CHD7-212ENST00000618450 UBE2WQ96B02 151 aa5.65□□□□□ -1.51
CHD7-212ENST00000618450 DNAJC30Q96LL9 226 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms