RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 FAM231AP0DMU4 169 aa9.08□□□□□ -0.96
SRRT-216ENST00000618262 FAM231CP0DMU5 169 aa9.08□□□□□ -0.96
SRRT-216ENST00000618262 ZNF503Q96F45 646 aa9.08□□□□□ -0.96
SRRT-216ENST00000618262 SERP1Q9Y6X1 66 aa9.08□□□□□ -0.96
SRRT-216ENST00000618262 KNCNA6PVL3 124 aa9.08□□□□□ -0.96
SRRT-216ENST00000618262 UBE2L3P68036 154 aaKnown RBP9.08□□□□□ -0.96
SRRT-216ENST00000618262 ERHP84090 104 aaKnown RBP9.08□□□□□ -0.96
SRRT-216ENST00000618262 INS-IGF2F8WCM5 200 aa9.07□□□□□ -0.96
SRRT-216ENST00000618262 RNF5Q99942 180 aa9.07□□□□□ -0.96
SRRT-216ENST00000618262 SLC25A2Q9BXI2 301 aa9.07□□□□□ -0.96
SRRT-216ENST00000618262 RBM12B-AS1Q9P1G2 102 aa9.07□□□□□ -0.96
SRRT-216ENST00000618262 PKD1L1Q8TDX9 2849 aa9.07□□□□□ -0.96
SRRT-216ENST00000618262 Q6ZRU5 148 aa9.07□□□□□ -0.96
SRRT-216ENST00000618262 IGHG2P01859 326 aa9.06□□□□□ -0.96
SRRT-216ENST00000618262 TRGV3P03979 118 aa9.06□□□□□ -0.96
SRRT-216ENST00000618262 PRSS3P2Q8NHM4 247 aa9.06□□□□□ -0.96
SRRT-216ENST00000618262 LINC01006Q8NI28 216 aa9.06□□□□□ -0.96
SRRT-216ENST00000618262 IGLV2-8P01709 118 aa9.06□□□□□ -0.96
SRRT-216ENST00000618262 GP9P14770 177 aa9.06□□□□□ -0.96
SRRT-216ENST00000618262 EPM2AB3EWF7 344 aa9.06□□□□□ -0.96
SRRT-216ENST00000618262 LINC01619G3V211 115 aa9.06□□□□□ -0.96
SRRT-216ENST00000618262 H3BMM0 161 aa9.06□□□□□ -0.96
SRRT-216ENST00000618262 TRBV12-3P01733 135 aa9.06□□□□□ -0.96
SRRT-216ENST00000618262 RNASE2P10153 161 aaKnown RBP9.06□□□□□ -0.96
SRRT-216ENST00000618262 PRB4P10163 310 aaPredicted RBP9.06□□□□□ -0.96
SRRT-216ENST00000618262 SS18Q15532 418 aa9.06□□□□□ -0.96
SRRT-216ENST00000618262 C15orf32Q32M92 178 aa9.06□□□□□ -0.96
SRRT-216ENST00000618262 UBE2WQ96B02 151 aa9.06□□□□□ -0.96
SRRT-216ENST00000618262 TEX49A0A1B0GTD5 131 aa9.05□□□□□ -0.96
SRRT-216ENST00000618262 RNASE1P07998 156 aaKnown RBP9.05□□□□□ -0.96
SRRT-216ENST00000618262 NSUN5P1Q3KNT7 163 aa9.05□□□□□ -0.96
SRRT-216ENST00000618262 IFI27L1Q96BM0 104 aa9.05□□□□□ -0.96
SRRT-216ENST00000618262 FP248Q71RG6 208 aaPredicted RBP9.05□□□□□ -0.96
SRRT-216ENST00000618262 CD28P10747 220 aa9.04□□□□□ -0.96
SRRT-216ENST00000618262 FANCD2OSQ96PS1 177 aa9.04□□□□□ -0.96
SRRT-216ENST00000618262 MGST2Q99735 147 aa9.04□□□□□ -0.96
SRRT-216ENST00000618262 DKK2Q9UBU2 259 aa9.04□□□□□ -0.96
SRRT-216ENST00000618262 IGHV3OR16-13A0A075B7E8 117 aa9.04□□□□□ -0.96
SRRT-216ENST00000618262 IGHV3-74A0A0B4J1X5 117 aa9.04□□□□□ -0.96
SRRT-216ENST00000618262 MRPS12O15235 138 aaKnown RBP9.04□□□□□ -0.96
SRRT-216ENST00000618262 BUB3O43684 328 aa9.04□□□□□ -0.96
SRRT-216ENST00000618262 ORMDL2Q53FV1 153 aa9.04□□□□□ -0.96
SRRT-216ENST00000618262 CLEC19AQ6UXS0 136 aa9.04□□□□□ -0.96
SRRT-216ENST00000618262 AGRNO00468 2067 aa9.04□□□□□ -0.96
SRRT-216ENST00000618262 IGHV3-49A0A0A0MS15 119 aa9.03□□□□□ -0.96
SRRT-216ENST00000618262 SNRPD3P62318 126 aaKnown RBP9.03□□□□□ -0.96
SRRT-216ENST00000618262 KRTAP24-1Q3LI83 254 aa9.03□□□□□ -0.96
SRRT-216ENST00000618262 LINC00305Q7Z4B0 112 aa9.03□□□□□ -0.96
SRRT-216ENST00000618262 PRR15Q8IV56 129 aa9.03□□□□□ -0.96
SRRT-216ENST00000618262 PEX7O00628 323 aa9.03□□□□□ -0.96
SRRT-216ENST00000618262 A0A096LNJ9 63 aa9.02□□□□□ -0.97
SRRT-216ENST00000618262 NDUFC2-KCTD14E9PQ53 114 aa9.02□□□□□ -0.97
SRRT-216ENST00000618262 TMEM170BQ5T4T1 132 aa9.02□□□□□ -0.97
SRRT-216ENST00000618262 UBE2D1P51668 147 aa9.01□□□□□ -0.97
SRRT-216ENST00000618262 KRTAP10-3P60369 221 aa9.01□□□□□ -0.97
SRRT-216ENST00000618262 UPK3BQ9BT76 320 aa9.01□□□□□ -0.97
SRRT-216ENST00000618262 IGKV1OR2-108A0A075B7D4 117 aa9.01□□□□□ -0.97
SRRT-216ENST00000618262 IGHV3-66A0A0C4DH42 116 aa9.01□□□□□ -0.97
SRRT-216ENST00000618262 LINC01600Q96MT4 127 aa9.01□□□□□ -0.97
SRRT-216ENST00000618262 K7EIM0 57 aa9□□□□□ -0.97
SRRT-216ENST00000618262 CXCL5P42830 114 aa9□□□□□ -0.97
SRRT-216ENST00000618262 MAPKAPK5-AS1Q8N8E1 139 aa9□□□□□ -0.97
SRRT-216ENST00000618262 PMS2P5A8MQ11 134 aa9□□□□□ -0.97
SRRT-216ENST00000618262 HBDP02042 147 aa9□□□□□ -0.97
SRRT-216ENST00000618262 SUB1P53999 127 aaKnown RBP eCLIP9□□□□□ -0.97
SRRT-216ENST00000618262 IGLV11-55A0A075B6I3 123 aa8.99□□□□□ -0.97
SRRT-216ENST00000618262 CIRBPQ14011 172 aaKnown RBP8.99□□□□□ -0.97
SRRT-216ENST00000618262 MIC13Q5XKP0 118 aa8.99□□□□□ -0.97
SRRT-216ENST00000618262 SERP2Q8N6R1 65 aa8.99□□□□□ -0.97
SRRT-216ENST00000618262 KLHL30-AS1Q8NEE0 82 aa8.99□□□□□ -0.97
SRRT-216ENST00000618262 CCDC140Q96MF4 163 aa8.99□□□□□ -0.97
SRRT-216ENST00000618262 IGKV3-7A0A075B6H7 116 aa8.99□□□□□ -0.97
SRRT-216ENST00000618262 LINC00643Q86TS7 51 aa8.99□□□□□ -0.97
SRRT-216ENST00000618262 WDR83OSQ9Y284 106 aa8.99□□□□□ -0.97
SRRT-216ENST00000618262 PLAC8L1A1L4L8 177 aa8.98□□□□□ -0.97
SRRT-216ENST00000618262 I3L2K1 104 aa8.98□□□□□ -0.97
SRRT-216ENST00000618262 CRIP2P52943 208 aaPredicted RBP8.98□□□□□ -0.97
SRRT-216ENST00000618262 C2orf83Q53S99 150 aa8.98□□□□□ -0.97
SRRT-216ENST00000618262 C11orf68Q9H3H3 251 aaKnown RBP8.98□□□□□ -0.97
SRRT-216ENST00000618262 ACYP1P07311 99 aa8.97□□□□□ -0.97
SRRT-216ENST00000618262 SYNJ2BPP57105 145 aa8.97□□□□□ -0.97
SRRT-216ENST00000618262 MDFIQ99750 246 aa8.97□□□□□ -0.97
SRRT-216ENST00000618262 SORL1Q92673 2214 aa8.97□□□□□ -0.97
SRRT-216ENST00000618262 WI2-2373I1.2A0A1W2PRP0 233 aa8.97□□□□□ -0.97
SRRT-216ENST00000618262 HIST1H4AP62805 103 aaKnown RBP8.97□□□□□ -0.97
SRRT-216ENST00000618262 TWIST1Q15672 202 aa8.97□□□□□ -0.97
SRRT-216ENST00000618262 C5orf38Q86SI9 138 aa8.97□□□□□ -0.97
SRRT-216ENST00000618262 DCANP1Q8TF63 244 aa8.97□□□□□ -0.97
SRRT-216ENST00000618262 TMEM167BQ9NRX6 74 aa8.97□□□□□ -0.97
SRRT-216ENST00000618262 CLPSL1A2RUU4 121 aa8.96□□□□□ -0.97
SRRT-216ENST00000618262 IFI27P40305 119 aaPredicted RBP8.96□□□□□ -0.97
SRRT-216ENST00000618262 NOTCH1P46531 2555 aa8.96□□□□□ -0.97
SRRT-216ENST00000618262 CFHR3Q02985 330 aa8.96□□□□□ -0.97
SRRT-216ENST00000618262 SPATA3Q8NHX4 192 aa8.96□□□□□ -0.97
SRRT-216ENST00000618262 TMEM243Q9BU79 118 aa8.96□□□□□ -0.97
SRRT-216ENST00000618262 LAMTOR3Q9UHA4 124 aa8.96□□□□□ -0.97
SRRT-216ENST00000618262 C8orf87E5RJ46 101 aa8.96□□□□□ -0.98
SRRT-216ENST00000618262 F8W735 103 aaPredicted RBP8.96□□□□□ -0.98
SRRT-216ENST00000618262 IGLV1-40P01703 118 aa8.96□□□□□ -0.98
SRRT-216ENST00000618262 ZNF22P17026 224 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms