RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 GATD1Q8NB37 220 aa14.33□□□□□ -0.12
NEDD4L-237ENST00000617539 LRP1Q07954 4544 aaKnown RBP14.33□□□□□ -0.12
NEDD4L-237ENST00000617539 TRAV26-2A0A0B4J265 109 aa14.32□□□□□ -0.12
NEDD4L-237ENST00000617539 DGAT2L7PQ6IED9 249 aa14.32□□□□□ -0.12
NEDD4L-237ENST00000617539 ALKAL2Q6UX46 152 aa14.32□□□□□ -0.12
NEDD4L-237ENST00000617539 C9orf163Q8N9P6 203 aa14.32□□□□□ -0.12
NEDD4L-237ENST00000617539 AKAP14Q86UN6 197 aa14.31□□□□□ -0.12
NEDD4L-237ENST00000617539 KRTAP29-1A8MX34 341 aaPredicted RBP14.3□□□□□ -0.12
NEDD4L-237ENST00000617539 PANO1I0J062 215 aa14.3□□□□□ -0.12
NEDD4L-237ENST00000617539 J3QL48 77 aa14.3□□□□□ -0.12
NEDD4L-237ENST00000617539 FOXA3P55318 350 aaPredicted RBP14.3□□□□□ -0.12
NEDD4L-237ENST00000617539 LYPD6BQ8NI32 183 aa14.3□□□□□ -0.12
NEDD4L-237ENST00000617539 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.3□□□□□ -0.12
NEDD4L-237ENST00000617539 PKHD1L1Q86WI1 4243 aa14.3□□□□□ -0.12
NEDD4L-237ENST00000617539 hCG_2014768A0A024R1R8 64 aa14.29□□□□□ -0.12
NEDD4L-237ENST00000617539 TMEM250H0YL14 139 aa14.29□□□□□ -0.12
NEDD4L-237ENST00000617539 AMTP48728 403 aa14.29□□□□□ -0.12
NEDD4L-237ENST00000617539 COTL1Q14019 142 aa14.29□□□□□ -0.12
NEDD4L-237ENST00000617539 TRAV8-4A0A0B4J246 113 aa14.28□□□□□ -0.12
NEDD4L-237ENST00000617539 RPL39LQ96EH5 51 aaKnown RBP14.28□□□□□ -0.12
NEDD4L-237ENST00000617539 SDIM1Q6ZPB5 146 aa14.27□□□□□ -0.13
NEDD4L-237ENST00000617539 FAT3Q8TDW7 4589 aa14.27□□□□□ -0.13
NEDD4L-237ENST00000617539 BLOC1S1P78537 153 aa14.26□□□□□ -0.13
NEDD4L-237ENST00000617539 FAM231DQ6ZW35 169 aa14.26□□□□□ -0.13
NEDD4L-237ENST00000617539 CLRN3Q8NCR9 226 aa14.26□□□□□ -0.13
NEDD4L-237ENST00000617539 UBE2L6O14933 153 aa14.25□□□□□ -0.13
NEDD4L-237ENST00000617539 SLPIP03973 132 aa14.25□□□□□ -0.13
NEDD4L-237ENST00000617539 CNBPP62633 177 aaKnown RBP14.25□□□□□ -0.13
NEDD4L-237ENST00000617539 hDV102S1A0JD36 115 aa14.24□□□□□ -0.13
NEDD4L-237ENST00000617539 GATCO43716 136 aaKnown RBP14.24□□□□□ -0.13
NEDD4L-237ENST00000617539 CEBPGP53567 150 aa14.22□□□□□ -0.13
NEDD4L-237ENST00000617539 A8MWL6 223 aa14.21□□□□□ -0.13
NEDD4L-237ENST00000617539 GAS8-AS1O95177 125 aa14.21□□□□□ -0.13
NEDD4L-237ENST00000617539 C15orf56Q8N910 161 aa14.21□□□□□ -0.13
NEDD4L-237ENST00000617539 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.2□□□□□ -0.14
NEDD4L-237ENST00000617539 IGKV2-29A2NJV5 120 aaPredicted RBP14.2□□□□□ -0.14
NEDD4L-237ENST00000617539 HNRNPA3P51991 378 aaKnown RBP14.2□□□□□ -0.14
NEDD4L-237ENST00000617539 RPL37AP61513 92 aaKnown RBP14.2□□□□□ -0.14
NEDD4L-237ENST00000617539 CIRBPQ14011 172 aaKnown RBP14.2□□□□□ -0.14
NEDD4L-237ENST00000617539 CT83Q5H943 113 aa14.2□□□□□ -0.14
NEDD4L-237ENST00000617539 SMIM15Q7Z3B0 74 aa14.2□□□□□ -0.14
NEDD4L-237ENST00000617539 GAGE12HA6NDE8 117 aa14.19□□□□□ -0.14
NEDD4L-237ENST00000617539 SDHAF1A6NFY7 115 aa14.19□□□□□ -0.14
NEDD4L-237ENST00000617539 NCR2O95944 276 aa14.19□□□□□ -0.14
NEDD4L-237ENST00000617539 LINC01551Q86U37 167 aa14.19□□□□□ -0.14
NEDD4L-237ENST00000617539 IGKV3OR2-268A0A0C4DH90 116 aa14.18□□□□□ -0.14
NEDD4L-237ENST00000617539 TEX261Q6UWH6 196 aa14.18□□□□□ -0.14
NEDD4L-237ENST00000617539 SMIM7Q9BQ49 75 aa14.18□□□□□ -0.14
NEDD4L-237ENST00000617539 TRBV6-5A0A0K0K1A5 114 aa14.17□□□□□ -0.14
NEDD4L-237ENST00000617539 FAM231BA6NCW3 169 aa14.17□□□□□ -0.14
NEDD4L-237ENST00000617539 APCSP02743 223 aa14.17□□□□□ -0.14
NEDD4L-237ENST00000617539 IGHV3-64A0A075B6Q5 118 aa14.16□□□□□ -0.14
NEDD4L-237ENST00000617539 CHTF8P0CG12 524 aa14.16□□□□□ -0.14
NEDD4L-237ENST00000617539 FGF6P10767 208 aa14.16□□□□□ -0.14
NEDD4L-237ENST00000617539 AMMECR1LQ6DCA0 310 aa14.16□□□□□ -0.14
NEDD4L-237ENST00000617539 FAM210AQ96ND0 272 aa14.16□□□□□ -0.14
NEDD4L-237ENST00000617539 EIF5A2Q9GZV4 153 aaKnown RBP14.16□□□□□ -0.14
NEDD4L-237ENST00000617539 HIGD1CA8MV81 97 aa14.15□□□□□ -0.14
NEDD4L-237ENST00000617539 H7C423 109 aa14.15□□□□□ -0.14
NEDD4L-237ENST00000617539 NDUFS6O75380 124 aaKnown RBP14.15□□□□□ -0.14
NEDD4L-237ENST00000617539 RNASEKQ6P5S7 137 aaKnown RBP14.15□□□□□ -0.14
NEDD4L-237ENST00000617539 TSKUQ8WUA8 353 aa14.15□□□□□ -0.14
NEDD4L-237ENST00000617539 AP5S1Q9NUS5 200 aa14.15□□□□□ -0.14
NEDD4L-237ENST00000617539 I3L3M4 83 aa14.14□□□□□ -0.15
NEDD4L-237ENST00000617539 OXTP01178 125 aa14.14□□□□□ -0.15
NEDD4L-237ENST00000617539 TSHBP01222 138 aa14.14□□□□□ -0.15
NEDD4L-237ENST00000617539 SRP19P09132 144 aaKnown RBP14.14□□□□□ -0.15
NEDD4L-237ENST00000617539 CHCHD10Q8WYQ3 142 aaPredicted RBP14.14□□□□□ -0.15
NEDD4L-237ENST00000617539 RNF185Q96GF1 192 aa14.14□□□□□ -0.15
NEDD4L-237ENST00000617539 HMCN2Q8NDA2 5059 aa14.13□□□□□ -0.15
NEDD4L-237ENST00000617539 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.13□□□□□ -0.15
NEDD4L-237ENST00000617539 A0A1B0GUT8 65 aa14.13□□□□□ -0.15
NEDD4L-237ENST00000617539 ZNF727A8MUV8 499 aa14.13□□□□□ -0.15
NEDD4L-237ENST00000617539 RPS10P46783 165 aaKnown RBP14.13□□□□□ -0.15
NEDD4L-237ENST00000617539 SPACA4Q8TDM5 124 aa14.13□□□□□ -0.15
NEDD4L-237ENST00000617539 TMEM191AQ9H0A3 160 aa14.13□□□□□ -0.15
NEDD4L-237ENST00000617539 ESDP10768 282 aa14.12□□□□□ -0.15
NEDD4L-237ENST00000617539 PMCHP20382 165 aa14.12□□□□□ -0.15
NEDD4L-237ENST00000617539 HIGD2BQ4VC39 106 aa14.12□□□□□ -0.15
NEDD4L-237ENST00000617539 OSTCQ9NRP0 149 aa14.12□□□□□ -0.15
NEDD4L-237ENST00000617539 FOXI1Q12951 378 aa14.11□□□□□ -0.15
NEDD4L-237ENST00000617539 BORCS7Q96B45 105 aa14.11□□□□□ -0.15
NEDD4L-237ENST00000617539 TMEM242Q9NWH2 141 aa14.11□□□□□ -0.15
NEDD4L-237ENST00000617539 A0A087WYN8 130 aa14.1□□□□□ -0.15
NEDD4L-237ENST00000617539 A0A1B0GVG6 124 aa14.1□□□□□ -0.15
NEDD4L-237ENST00000617539 ZNF25P17030 456 aaPredicted RBP14.1□□□□□ -0.15
NEDD4L-237ENST00000617539 RAB4AP20338 218 aa14.1□□□□□ -0.15
NEDD4L-237ENST00000617539 AMN1Q8IY45 258 aa14.1□□□□□ -0.15
NEDD4L-237ENST00000617539 ST20Q9HBF5 79 aa14.1□□□□□ -0.15
NEDD4L-237ENST00000617539 V9GYV3 84 aa14.1□□□□□ -0.15
NEDD4L-237ENST00000617539 GVQW2A0A096LPI5 108 aaPredicted RBP14.09□□□□□ -0.15
NEDD4L-237ENST00000617539 POLR2KP53803 58 aaKnown RBP14.09□□□□□ -0.15
NEDD4L-237ENST00000617539 CFAP161Q6P656 301 aa14.09□□□□□ -0.15
NEDD4L-237ENST00000617539 OR5A1Q8NGJ0 315 aa14.09□□□□□ -0.15
NEDD4L-237ENST00000617539 TRBV27A0A0K0K1C4 114 aa14.07□□□□□ -0.16
NEDD4L-237ENST00000617539 COX6A2Q02221 97 aa14.07□□□□□ -0.16
NEDD4L-237ENST00000617539 NUP35Q8NFH5 326 aa14.07□□□□□ -0.16
NEDD4L-237ENST00000617539 ISOC2Q96AB3 205 aa14.07□□□□□ -0.16
NEDD4L-237ENST00000617539 MRAP2Q96G30 205 aa14.07□□□□□ -0.16
NEDD4L-237ENST00000617539 LINC00959A0A1B0GUT2 108 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms