RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 XGP55808 180 aa8.05□□□□□ -1.12
CLTCL1-209ENST00000617103 ODF3Q96PU9 254 aa8.05□□□□□ -1.12
CLTCL1-209ENST00000617103 NDUFA7O95182 113 aa8.05□□□□□ -1.12
CLTCL1-209ENST00000617103 ZFHX2Q9C0A1 2572 aaPredicted RBP8.05□□□□□ -1.12
CLTCL1-209ENST00000617103 IGLV2-11P01706 119 aa8.04□□□□□ -1.12
CLTCL1-209ENST00000617103 IGHV4-30-2A0A087WSY4 118 aa8.04□□□□□ -1.12
CLTCL1-209ENST00000617103 IGHV3-30P01768 117 aa8.04□□□□□ -1.12
CLTCL1-209ENST00000617103 IGHV3-30-5P0DP03 117 aa8.04□□□□□ -1.12
CLTCL1-209ENST00000617103 BPY2O14599 106 aa8.04□□□□□ -1.12
CLTCL1-209ENST00000617103 TMEM263Q8WUH6 116 aaKnown RBP8.04□□□□□ -1.12
CLTCL1-209ENST00000617103 COX7BP24311 80 aa8.03□□□□□ -1.12
CLTCL1-209ENST00000617103 CHKB-CPT1BH3BT56 60 aa8.03□□□□□ -1.12
CLTCL1-209ENST00000617103 Q8N976 141 aa8.03□□□□□ -1.12
CLTCL1-209ENST00000617103 C10orf105Q8TEF2 133 aa8.03□□□□□ -1.12
CLTCL1-209ENST00000617103 FAM110AQ9BQ89 295 aa8.03□□□□□ -1.12
CLTCL1-209ENST00000617103 NOTCH2Q04721 2471 aa8.03□□□□□ -1.12
CLTCL1-209ENST00000617103 INSL3P51460 131 aa8.02□□□□□ -1.12
CLTCL1-209ENST00000617103 IGF2-ASQ6U949 168 aa8.02□□□□□ -1.12
CLTCL1-209ENST00000617103 SERP2Q8N6R1 65 aa8.02□□□□□ -1.12
CLTCL1-209ENST00000617103 PCNX3Q9H6A9 2034 aa8.02□□□□□ -1.13
CLTCL1-209ENST00000617103 LINC00467Q9BRT7 94 aa8.02□□□□□ -1.13
CLTCL1-209ENST00000617103 ESM1Q9NQ30 184 aa8.02□□□□□ -1.13
CLTCL1-209ENST00000617103 PTPN13Q12923 2485 aa8.02□□□□□ -1.13
CLTCL1-209ENST00000617103 ODF3BA8MYP8 253 aa8.02□□□□□ -1.13
CLTCL1-209ENST00000617103 ZFAND2AQ8N6M9 145 aa8.02□□□□□ -1.13
CLTCL1-209ENST00000617103 ADAMTS9Q9P2N4 1935 aa8.02□□□□□ -1.13
CLTCL1-209ENST00000617103 SONP18583 2426 aaKnown RBP8.02□□□□□ -1.13
CLTCL1-209ENST00000617103 TRBV27A0A0K0K1C4 114 aa8.02□□□□□ -1.13
CLTCL1-209ENST00000617103 CLPSL1A2RUU4 121 aa8.02□□□□□ -1.13
CLTCL1-209ENST00000617103 IGF1P05019 195 aa8.02□□□□□ -1.13
CLTCL1-209ENST00000617103 TIRAPP58753 221 aa8.02□□□□□ -1.13
CLTCL1-209ENST00000617103 UFSP1Q6NVU6 142 aa8.02□□□□□ -1.13
CLTCL1-209ENST00000617103 ENHOQ6UWT2 76 aa8.02□□□□□ -1.13
CLTCL1-209ENST00000617103 CCDC179H3BU77 68 aa8.01□□□□□ -1.13
CLTCL1-209ENST00000617103 M0QY20 66 aa8.01□□□□□ -1.13
CLTCL1-209ENST00000617103 NRACQ8N912 160 aa8.01□□□□□ -1.13
CLTCL1-209ENST00000617103 PRO0255Q9UI72 69 aa8.01□□□□□ -1.13
CLTCL1-209ENST00000617103 KLK12Q9UKR0 248 aa8.01□□□□□ -1.13
CLTCL1-209ENST00000617103 LST1O00453 97 aa8.01□□□□□ -1.13
CLTCL1-209ENST00000617103 WISP2O76076 250 aa8.01□□□□□ -1.13
CLTCL1-209ENST00000617103 MYO18BQ8IUG5 2567 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 IBA57-AS1B1ANH7 110 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 NDUFC2-KCTD14E9PQ53 114 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 TIMM17BO60830 172 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 PKIGQ9Y2B9 76 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 TRBV6-5A0A0K0K1A5 114 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 FAM240AA0A1B0GVK7 77 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 A6NDX4 124 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 C9orf66Q5T8R8 295 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 CLUHP3Q96NS8 147 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 LINC01548A6NM66 108 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 USP17L23D6RBM5 183 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 COX7CP15954 63 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 PIK3CD-AS1Q5SR53 167 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 MPLKIPQ8TAP9 179 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 ZFAND3Q9H8U3 227 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 PYGO1Q9Y3Y4 419 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 SVIPQ8NHG7 77 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 SMAD5-AS1Q9Y6J3 95 aa8□□□□□ -1.13
CLTCL1-209ENST00000617103 K7EQG2 157 aa7.99□□□□□ -1.13
CLTCL1-209ENST00000617103 C20orf173Q96LM9 149 aa7.99□□□□□ -1.13
CLTCL1-209ENST00000617103 ZNF106Q9H2Y7 1883 aaKnown RBP7.99□□□□□ -1.13
CLTCL1-209ENST00000617103 SLPIP03973 132 aa7.99□□□□□ -1.13
CLTCL1-209ENST00000617103 MAP6D1Q9H9H5 199 aa7.99□□□□□ -1.13
CLTCL1-209ENST00000617103 A0A1W2PNU3 283 aaPredicted RBP7.99□□□□□ -1.13
CLTCL1-209ENST00000617103 Q6Q795 121 aa7.99□□□□□ -1.13
CLTCL1-209ENST00000617103 FBXL19-AS1Q494R0 122 aa7.98□□□□□ -1.13
CLTCL1-209ENST00000617103 ZMAT4Q9H898 229 aa7.98□□□□□ -1.13
CLTCL1-209ENST00000617103 ADORA2A-AS1P86434 159 aa7.98□□□□□ -1.13
CLTCL1-209ENST00000617103 FAM222AQ5U5X8 452 aa7.98□□□□□ -1.13
CLTCL1-209ENST00000617103 Q6ZTI0 123 aa7.98□□□□□ -1.13
CLTCL1-209ENST00000617103 C4orf3Q8WVX3 66 aa7.97□□□□□ -1.13
CLTCL1-209ENST00000617103 URB1-AS1Q96HZ7 61 aa7.97□□□□□ -1.13
CLTCL1-209ENST00000617103 KIAA1549Q9HCM3 1950 aa7.97□□□□□ -1.13
CLTCL1-209ENST00000617103 H7C423 109 aa7.97□□□□□ -1.13
CLTCL1-209ENST00000617103 NDUFC1O43677 76 aa7.97□□□□□ -1.13
CLTCL1-209ENST00000617103 CCL18P55774 89 aa7.97□□□□□ -1.13
CLTCL1-209ENST00000617103 EBI3Q14213 229 aa7.97□□□□□ -1.13
CLTCL1-209ENST00000617103 SPTSSBQ8NFR3 76 aa7.97□□□□□ -1.13
CLTCL1-209ENST00000617103 Q6ZS46 218 aa7.96□□□□□ -1.13
CLTCL1-209ENST00000617103 LRRC75A-AS1Q8N1F1 130 aa7.96□□□□□ -1.13
CLTCL1-209ENST00000617103 HCFC1P51610 2035 aa7.96□□□□□ -1.14
CLTCL1-209ENST00000617103 A0A0U1RQV1 116 aa7.96□□□□□ -1.14
CLTCL1-209ENST00000617103 FSTL3O95633 263 aa7.96□□□□□ -1.14
CLTCL1-209ENST00000617103 ATP5EP56381 51 aaPredicted RBP7.96□□□□□ -1.14
CLTCL1-209ENST00000617103 DAZAP2Q15038 168 aaPredicted RBP7.96□□□□□ -1.14
CLTCL1-209ENST00000617103 MRPL55Q7Z7F7 128 aaKnown RBP7.96□□□□□ -1.14
CLTCL1-209ENST00000617103 POLR2KP53803 58 aaKnown RBP7.96□□□□□ -1.14
CLTCL1-209ENST00000617103 CNFNQ9BYD5 112 aa7.96□□□□□ -1.14
CLTCL1-209ENST00000617103 LY6LH3BQJ8 138 aa7.95□□□□□ -1.14
CLTCL1-209ENST00000617103 SCXQ7RTU7 201 aa7.95□□□□□ -1.14
CLTCL1-209ENST00000617103 KIF26AQ9ULI4 1882 aaPredicted RBP7.95□□□□□ -1.14
CLTCL1-209ENST00000617103 C11orf21Q9P2W6 132 aa7.95□□□□□ -1.14
CLTCL1-209ENST00000617103 TANC2Q9HCD6 1990 aa7.95□□□□□ -1.14
CLTCL1-209ENST00000617103 GAS8-AS1O95177 125 aa7.95□□□□□ -1.14
CLTCL1-209ENST00000617103 LMO4P61968 165 aa7.95□□□□□ -1.14
CLTCL1-209ENST00000617103 RNASE3P12724 160 aaKnown RBP7.94□□□□□ -1.14
CLTCL1-209ENST00000617103 DEFB113Q30KQ7 82 aa7.94□□□□□ -1.14
CLTCL1-209ENST00000617103 LINC00269Q8N2A0 174 aa7.94□□□□□ -1.14
CLTCL1-209ENST00000617103 V9GYY9 64 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms