RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 PPP1R17O96001 155 aa1.72□□□□□ -2.13
RFC3-203ENST00000616236 COL5A1-AS1Q5SY13 56 aa1.72□□□□□ -2.13
RFC3-203ENST00000616236 FAM213BQ8TBF2 198 aa1.72□□□□□ -2.13
RFC3-203ENST00000616236 SNHG12Q9BXW3 62 aa1.72□□□□□ -2.13
RFC3-203ENST00000616236 Q8N6K4 173 aa1.71□□□□□ -2.14
RFC3-203ENST00000616236 Q96NJ1 140 aa1.71□□□□□ -2.14
RFC3-203ENST00000616236 ABCC5O15440 1437 aa1.71□□□□□ -2.14
RFC3-203ENST00000616236 CHD1O14646 1710 aa1.71□□□□□ -2.14
RFC3-203ENST00000616236 MT-ATP8P03928 68 aa1.7□□□□□ -2.14
RFC3-203ENST00000616236 SPINK13Q1W4C9 94 aa1.7□□□□□ -2.14
RFC3-203ENST00000616236 LENEPQ9Y5L5 61 aa1.7□□□□□ -2.14
RFC3-203ENST00000616236 LAMA4Q16363 1823 aa1.69□□□□□ -2.14
RFC3-203ENST00000616236 MGST2Q99735 147 aa1.69□□□□□ -2.14
RFC3-203ENST00000616236 SCP2D1Q9UJQ7 156 aa1.69□□□□□ -2.14
RFC3-203ENST00000616236 AP4S1Q9Y587 144 aa1.69□□□□□ -2.14
RFC3-203ENST00000616236 MRC1P22897 1456 aa1.69□□□□□ -2.14
RFC3-203ENST00000616236 GOLGA3Q08378 1498 aa1.69□□□□□ -2.14
RFC3-203ENST00000616236 hADV29S1A0JD25 119 aa1.68□□□□□ -2.14
RFC3-203ENST00000616236 NAP1L6A6NFF2 107 aa1.68□□□□□ -2.14
RFC3-203ENST00000616236 KRTAP10-4P60372 401 aaPredicted RBP1.68□□□□□ -2.14
RFC3-203ENST00000616236 SPAG11BQ08648 103 aa1.68□□□□□ -2.14
RFC3-203ENST00000616236 SPAG11AQ6PDA7 123 aa1.68□□□□□ -2.14
RFC3-203ENST00000616236 WFDC6Q9BQY6 131 aa1.68□□□□□ -2.14
RFC3-203ENST00000616236 DPY30Q9C005 99 aa1.68□□□□□ -2.14
RFC3-203ENST00000616236 NDUFA4L2Q9NRX3 87 aa1.68□□□□□ -2.14
RFC3-203ENST00000616236 KNTC1P50748 2209 aa1.68□□□□□ -2.14
RFC3-203ENST00000616236 F5P12259 2224 aa1.67□□□□□ -2.14
RFC3-203ENST00000616236 A0A096LNT2 108 aa1.67□□□□□ -2.14
RFC3-203ENST00000616236 TRGV1A0A0A0MS02 117 aa1.67□□□□□ -2.14
RFC3-203ENST00000616236 GNGT2O14610 69 aa1.67□□□□□ -2.14
RFC3-203ENST00000616236 SPINT3P49223 89 aa1.67□□□□□ -2.14
RFC3-203ENST00000616236 CCL18P55774 89 aa1.67□□□□□ -2.14
RFC3-203ENST00000616236 UBA52P62987 128 aaKnown RBP1.67□□□□□ -2.14
RFC3-203ENST00000616236 FYCO1Q9BQS8 1478 aa1.67□□□□□ -2.14
RFC3-203ENST00000616236 TTC37Q6PGP7 1564 aa1.67□□□□□ -2.14
RFC3-203ENST00000616236 K7EIL1 84 aa1.66□□□□□ -2.14
RFC3-203ENST00000616236 ACYP2P14621 99 aa1.66□□□□□ -2.14
RFC3-203ENST00000616236 KRTDAPP60985 99 aa1.66□□□□□ -2.14
RFC3-203ENST00000616236 RPL37P61927 97 aaKnown RBP1.66□□□□□ -2.14
RFC3-203ENST00000616236 DYNLRB1Q9NP97 96 aa1.66□□□□□ -2.14
RFC3-203ENST00000616236 R4GMQ9 66 aa1.66□□□□□ -2.14
RFC3-203ENST00000616236 TEX14Q8IWB6 1497 aa1.66□□□□□ -2.14
RFC3-203ENST00000616236 SHANK2Q9UPX8 1470 aa1.66□□□□□ -2.14
RFC3-203ENST00000616236 CRYM-AS1A6NIL9 109 aa1.65□□□□□ -2.15
RFC3-203ENST00000616236 CHKB-CPT1BH3BT56 60 aa1.65□□□□□ -2.15
RFC3-203ENST00000616236 LINC00032P0C843 101 aa1.65□□□□□ -2.15
RFC3-203ENST00000616236 ARL14EPLP0DKL9 152 aa1.65□□□□□ -2.15
RFC3-203ENST00000616236 Q0VG73 95 aa1.65□□□□□ -2.15
RFC3-203ENST00000616236 Q5VV11 94 aa1.65□□□□□ -2.15
RFC3-203ENST00000616236 MANBALQ9NQG1 85 aa1.65□□□□□ -2.15
RFC3-203ENST00000616236 V9GYH0 126 aa1.65□□□□□ -2.15
RFC3-203ENST00000616236 IFT172Q9UG01 1749 aa1.65□□□□□ -2.15
RFC3-203ENST00000616236 GAPVD1Q14C86 1478 aa1.64□□□□□ -2.15
RFC3-203ENST00000616236 MUC6Q6W4X9 2439 aa1.64□□□□□ -2.15
RFC3-203ENST00000616236 TRAV1-2A0A0B4J238 106 aa1.64□□□□□ -2.15
RFC3-203ENST00000616236 F2Z2F3 143 aa1.63□□□□□ -2.15
RFC3-203ENST00000616236 HMGN4O00479 90 aa1.63□□□□□ -2.15
RFC3-203ENST00000616236 SEC11AP67812 179 aa1.63□□□□□ -2.15
RFC3-203ENST00000616236 BAGE3Q86Y29 109 aa1.63□□□□□ -2.15
RFC3-203ENST00000616236 FAM167A-AS1Q96KT0 104 aa1.63□□□□□ -2.15
RFC3-203ENST00000616236 PMCHL2Q9BQD1 86 aa1.63□□□□□ -2.15
RFC3-203ENST00000616236 UQCR10Q9UDW1 63 aa1.63□□□□□ -2.15
RFC3-203ENST00000616236 LAMC3Q9Y6N6 1575 aa1.63□□□□□ -2.15
RFC3-203ENST00000616236 KDM5AP29375 1690 aaKnown RBP1.62□□□□□ -2.15
RFC3-203ENST00000616236 TRAV22A0A0B4J277 110 aa1.62□□□□□ -2.15
RFC3-203ENST00000616236 M0R135 149 aa1.62□□□□□ -2.15
RFC3-203ENST00000616236 KRTAP5-8O75690 187 aa1.62□□□□□ -2.15
RFC3-203ENST00000616236 GNG2P59768 71 aa1.62□□□□□ -2.15
RFC3-203ENST00000616236 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.62□□□□□ -2.15
RFC3-203ENST00000616236 VAMP8Q9BV40 100 aa1.62□□□□□ -2.15
RFC3-203ENST00000616236 TOP2BQ02880 1626 aa1.62□□□□□ -2.15
RFC3-203ENST00000616236 MYOM1P52179 1685 aa1.61□□□□□ -2.15
RFC3-203ENST00000616236 ANKRD36BQ8N2N9 1353 aa1.61□□□□□ -2.15
RFC3-203ENST00000616236 UBE2D3P61077 147 aa1.61□□□□□ -2.15
RFC3-203ENST00000616236 UBE2D2P62837 147 aa1.61□□□□□ -2.15
RFC3-203ENST00000616236 VMO1Q7Z5L0 202 aa1.61□□□□□ -2.15
RFC3-203ENST00000616236 HELZ2Q9BYK8 2649 aaKnown RBP1.61□□□□□ -2.15
RFC3-203ENST00000616236 ZNF236Q9UL36 1845 aa1.61□□□□□ -2.15
RFC3-203ENST00000616236 ZMYM4Q5VZL5 1548 aa1.61□□□□□ -2.15
RFC3-203ENST00000616236 GVQW2A0A096LPI5 108 aaPredicted RBP1.6□□□□□ -2.15
RFC3-203ENST00000616236 SMIM11BQ8TCY0 68 aa1.6□□□□□ -2.15
RFC3-203ENST00000616236 BPESC1Q9GZL8 116 aa1.6□□□□□ -2.15
RFC3-203ENST00000616236 CDC42SE2Q9NRR3 84 aa1.6□□□□□ -2.15
RFC3-203ENST00000616236 PRO1854Q9UHT4 67 aa1.6□□□□□ -2.15
RFC3-203ENST00000616236 ADGRL2O95490 1459 aa1.6□□□□□ -2.15
RFC3-203ENST00000616236 ARHGEF5Q12774 1597 aa1.59□□□□□ -2.15
RFC3-203ENST00000616236 TROQ12816 1431 aaPredicted RBP1.59□□□□□ -2.15
RFC3-203ENST00000616236 MAGI1Q96QZ7 1491 aaPredicted RBP1.59□□□□□ -2.15
RFC3-203ENST00000616236 RAPGEF2Q9Y4G8 1499 aa1.59□□□□□ -2.15
RFC3-203ENST00000616236 CTXND1A0A1B0GTU2 59 aa1.59□□□□□ -2.15
RFC3-203ENST00000616236 LOC285095A0A1B0GVY8 99 aa1.59□□□□□ -2.15
RFC3-203ENST00000616236 TMEM14DPA8MWL7 114 aa1.59□□□□□ -2.15
RFC3-203ENST00000616236 ZNF137PP52743 207 aa1.59□□□□□ -2.15
RFC3-203ENST00000616236 FXYD6P3P58550 94 aa1.59□□□□□ -2.15
RFC3-203ENST00000616236 SFTA2Q6UW10 78 aa1.59□□□□□ -2.15
RFC3-203ENST00000616236 Q9H521 79 aa1.59□□□□□ -2.15
RFC3-203ENST00000616236 NSD3Q9BZ95 1437 aa1.58□□□□□ -2.16
RFC3-203ENST00000616236 MYO7AQ13402 2215 aa1.58□□□□□ -2.16
RFC3-203ENST00000616236 PRDM15P57071 1507 aaPredicted RBP1.58□□□□□ -2.16
RFC3-203ENST00000616236 IGLC7A0M8Q6 106 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms