RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 BAALCQ8WXS3 180 aa12.98□□□□□ -0.33
SEMA6C-209ENST00000613223 CYSLTR1Q9Y271 337 aa12.98□□□□□ -0.33
SEMA6C-209ENST00000613223 IGHV3OR16-12A0A075B7B8 117 aa12.98□□□□□ -0.33
SEMA6C-209ENST00000613223 AZU1P20160 251 aa12.98□□□□□ -0.33
SEMA6C-209ENST00000613223 RHODO00212 210 aa12.97□□□□□ -0.33
SEMA6C-209ENST00000613223 GIG44P09565 113 aaPredicted RBP12.97□□□□□ -0.33
SEMA6C-209ENST00000613223 RIPPLY3P57055 190 aa12.97□□□□□ -0.33
SEMA6C-209ENST00000613223 CFAP126Q5VTH2 177 aa12.97□□□□□ -0.33
SEMA6C-209ENST00000613223 IGHV3-73A0A0B4J1V6 119 aa12.96□□□□□ -0.33
SEMA6C-209ENST00000613223 IL17DQ8TAD2 202 aa12.96□□□□□ -0.33
SEMA6C-209ENST00000613223 MRPL16Q9NX20 251 aaKnown RBP12.96□□□□□ -0.33
SEMA6C-209ENST00000613223 JMJD1CQ15652 2540 aa12.96□□□□□ -0.34
SEMA6C-209ENST00000613223 A0A1B0GWB2 263 aa12.96□□□□□ -0.34
SEMA6C-209ENST00000613223 ZNF479Q96JC4 524 aa12.96□□□□□ -0.34
SEMA6C-209ENST00000613223 NIPBLQ6KC79 2804 aaeCLIP12.95□□□□□ -0.34
SEMA6C-209ENST00000613223 PRSS29PA6NIE9 313 aa12.95□□□□□ -0.34
SEMA6C-209ENST00000613223 RHOHQ15669 191 aa12.95□□□□□ -0.34
SEMA6C-209ENST00000613223 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.95□□□□□ -0.34
SEMA6C-209ENST00000613223 TMEM263Q8WUH6 116 aaKnown RBP12.95□□□□□ -0.34
SEMA6C-209ENST00000613223 C1QTNF4Q9BXJ3 329 aa12.95□□□□□ -0.34
SEMA6C-209ENST00000613223 TP53TG1Q9Y2A0 90 aa12.95□□□□□ -0.34
SEMA6C-209ENST00000613223 RS1O15537 224 aa12.94□□□□□ -0.34
SEMA6C-209ENST00000613223 RPL35AP18077 110 aaKnown RBP12.94□□□□□ -0.34
SEMA6C-209ENST00000613223 NACAE9PAV3 2078 aa12.94□□□□□ -0.34
SEMA6C-209ENST00000613223 I3L3M4 83 aa12.94□□□□□ -0.34
SEMA6C-209ENST00000613223 INSL3P51460 131 aa12.94□□□□□ -0.34
SEMA6C-209ENST00000613223 F8W1H4 67 aa12.93□□□□□ -0.34
SEMA6C-209ENST00000613223 TSHBP01222 138 aa12.92□□□□□ -0.34
SEMA6C-209ENST00000613223 RRN3P1Q2M238 152 aa12.92□□□□□ -0.34
SEMA6C-209ENST00000613223 DEFB104AQ8WTQ1 72 aa12.92□□□□□ -0.34
SEMA6C-209ENST00000613223 CITED1Q99966 193 aa12.92□□□□□ -0.34
SEMA6C-209ENST00000613223 PRADC1Q9BSG0 188 aa12.92□□□□□ -0.34
SEMA6C-209ENST00000613223 IGIPA6NJ69 53 aa12.92□□□□□ -0.34
SEMA6C-209ENST00000613223 IGHV3-53P01767 116 aa12.91□□□□□ -0.34
SEMA6C-209ENST00000613223 P0DMU3 169 aa12.91□□□□□ -0.34
SEMA6C-209ENST00000613223 FAM231AP0DMU4 169 aa12.91□□□□□ -0.34
SEMA6C-209ENST00000613223 FAM231CP0DMU5 169 aa12.91□□□□□ -0.34
SEMA6C-209ENST00000613223 RPL39P62891 51 aaKnown RBP12.91□□□□□ -0.34
SEMA6C-209ENST00000613223 RPL24P83731 157 aaKnown RBP12.91□□□□□ -0.34
SEMA6C-209ENST00000613223 C9orf66Q5T8R8 295 aa12.91□□□□□ -0.34
SEMA6C-209ENST00000613223 TMEM141Q96I45 108 aa12.91□□□□□ -0.34
SEMA6C-209ENST00000613223 TIMM17AQ99595 171 aa12.91□□□□□ -0.34
SEMA6C-209ENST00000613223 PAPPA-AS1Q5QFB9 102 aa12.9□□□□□ -0.34
SEMA6C-209ENST00000613223 Q6ZSN1 163 aa12.9□□□□□ -0.34
SEMA6C-209ENST00000613223 CSNK1G2-AS1Q8NCQ2 148 aa12.9□□□□□ -0.34
SEMA6C-209ENST00000613223 TNFRSF18Q9Y5U5 241 aa12.9□□□□□ -0.34
SEMA6C-209ENST00000613223 TRGV1A0A0A0MS02 117 aa12.9□□□□□ -0.34
SEMA6C-209ENST00000613223 TEX48A0A1B0GUV7 120 aa12.9□□□□□ -0.34
SEMA6C-209ENST00000613223 C16orf74Q96GX8 76 aa12.89□□□□□ -0.35
SEMA6C-209ENST00000613223 ZNF815PA8K554 130 aa12.89□□□□□ -0.35
SEMA6C-209ENST00000613223 DNAJC30Q96LL9 226 aa12.89□□□□□ -0.35
SEMA6C-209ENST00000613223 DAZ2Q13117 558 aaKnown RBP12.88□□□□□ -0.35
SEMA6C-209ENST00000613223 C20orf203Q8NBC4 194 aa12.88□□□□□ -0.35
SEMA6C-209ENST00000613223 SPATA3Q8NHX4 192 aa12.88□□□□□ -0.35
SEMA6C-209ENST00000613223 PMVKQ15126 192 aa12.87□□□□□ -0.35
SEMA6C-209ENST00000613223 SPANXB1Q9NS25 103 aaPredicted RBP12.87□□□□□ -0.35
SEMA6C-209ENST00000613223 F8P00451 2351 aa12.87□□□□□ -0.35
SEMA6C-209ENST00000613223 IGLV4-69A0A075B6H9 119 aa12.87□□□□□ -0.35
SEMA6C-209ENST00000613223 TMEM238LA0A1B0GVL6 79 aa12.87□□□□□ -0.35
SEMA6C-209ENST00000613223 A6NJY4 79 aa12.87□□□□□ -0.35
SEMA6C-209ENST00000613223 HERVK_113P61574 105 aa12.87□□□□□ -0.35
SEMA6C-209ENST00000613223 WFDC2Q14508 124 aa12.87□□□□□ -0.35
SEMA6C-209ENST00000613223 Q6ZTI0 123 aa12.87□□□□□ -0.35
SEMA6C-209ENST00000613223 H3BMG7 143 aa12.86□□□□□ -0.35
SEMA6C-209ENST00000613223 PLAC8L1A1L4L8 177 aa12.85□□□□□ -0.35
SEMA6C-209ENST00000613223 C11orf86A6NJI1 115 aa12.85□□□□□ -0.35
SEMA6C-209ENST00000613223 SCGB1D4Q6XE38 83 aa12.85□□□□□ -0.35
SEMA6C-209ENST00000613223 NOP10Q9NPE3 64 aaKnown RBP12.85□□□□□ -0.35
SEMA6C-209ENST00000613223 Q9UF83 564 aa12.85□□□□□ -0.35
SEMA6C-209ENST00000613223 FLNBO75369 2602 aaKnown RBP12.85□□□□□ -0.35
SEMA6C-209ENST00000613223 TRAV4A0A0B4J268 109 aa12.85□□□□□ -0.35
SEMA6C-209ENST00000613223 GAGE13Q4V321 117 aa12.84□□□□□ -0.35
SEMA6C-209ENST00000613223 PLEKHB2Q96CS7 222 aa12.84□□□□□ -0.35
SEMA6C-209ENST00000613223 PRO0461Q9UI25 63 aa12.84□□□□□ -0.35
SEMA6C-209ENST00000613223 NOTCH3Q9UM47 2321 aa12.84□□□□□ -0.35
SEMA6C-209ENST00000613223 J3QR89 54 aa12.83□□□□□ -0.35
SEMA6C-209ENST00000613223 UBE2D1P51668 147 aa12.83□□□□□ -0.35
SEMA6C-209ENST00000613223 SRSF9Q13242 221 aaKnown RBP eCLIP12.83□□□□□ -0.36
SEMA6C-209ENST00000613223 OVOL2Q9BRP0 275 aa12.83□□□□□ -0.36
SEMA6C-209ENST00000613223 PGPEP1Q9NXJ5 209 aa12.82□□□□□ -0.36
SEMA6C-209ENST00000613223 TENM1Q9UKZ4 2725 aa12.82□□□□□ -0.36
SEMA6C-209ENST00000613223 PYGO1Q9Y3Y4 419 aa12.81□□□□□ -0.36
SEMA6C-209ENST00000613223 ATRQ13535 2644 aa12.8□□□□□ -0.36
SEMA6C-209ENST00000613223 A0A0J9YY99 117 aa12.8□□□□□ -0.36
SEMA6C-209ENST00000613223 TRBV10-1A0A0K0K1A3 114 aa12.8□□□□□ -0.36
SEMA6C-209ENST00000613223 TEP1Q99973 2627 aaKnown RBP12.8□□□□□ -0.36
SEMA6C-209ENST00000613223 TMEM238C9JI98 176 aa12.8□□□□□ -0.36
SEMA6C-209ENST00000613223 K7EQD1 137 aa12.8□□□□□ -0.36
SEMA6C-209ENST00000613223 VWFP04275 2813 aa12.79□□□□□ -0.36
SEMA6C-209ENST00000613223 ETDBQ3ZM63 59 aa12.79□□□□□ -0.36
SEMA6C-209ENST00000613223 SH2D6Q7Z4S9 175 aa12.79□□□□□ -0.36
SEMA6C-209ENST00000613223 WFDC9Q8NEX5 89 aa12.79□□□□□ -0.36
SEMA6C-209ENST00000613223 OPRPNQ99935 248 aaPredicted RBP12.79□□□□□ -0.36
SEMA6C-209ENST00000613223 CHCHD7Q9BUK0 85 aa12.79□□□□□ -0.36
SEMA6C-209ENST00000613223 IGLV4-3A0A075B6K6 122 aa12.78□□□□□ -0.36
SEMA6C-209ENST00000613223 CIDEAO60543 219 aa12.78□□□□□ -0.36
SEMA6C-209ENST00000613223 GAGE7O76087 117 aa12.78□□□□□ -0.36
SEMA6C-209ENST00000613223 GAGE12FP0CL80 117 aa12.78□□□□□ -0.36
SEMA6C-209ENST00000613223 GAGE12GP0CL81 117 aa12.78□□□□□ -0.36
SEMA6C-209ENST00000613223 GAGE12IP0CL82 117 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms